RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 FEZ1Q99689 392 aa23.91■■□□□ 1.42
UBE2D3-216ENST00000503742 NT5C3AQ9H0P0 336 aa23.91■■□□□ 1.42
UBE2D3-216ENST00000503742 TMX1Q9H3N1 280 aa23.91■■□□□ 1.42
UBE2D3-216ENST00000503742 PSMA7O14818 248 aa23.9■■□□□ 1.42
UBE2D3-216ENST00000503742 WDR46O15213 610 aaKnown RBP23.9■■□□□ 1.42
UBE2D3-216ENST00000503742 TEX33O43247 280 aa23.9■■□□□ 1.42
UBE2D3-216ENST00000503742 PMS1P54277 932 aaKnown RBP23.9■■□□□ 1.42
UBE2D3-216ENST00000503742 STK4Q13043 487 aa23.9■■□□□ 1.42
UBE2D3-216ENST00000503742 UNC13DQ70J99 1090 aa23.9■■□□□ 1.42
UBE2D3-216ENST00000503742 FAM20AQ96MK3 541 aa23.9■■□□□ 1.42
UBE2D3-216ENST00000503742 LRRC27Q9C0I9 530 aa23.9■■□□□ 1.42
UBE2D3-216ENST00000503742 TRIM49BA6NDI0 452 aa23.89■■□□□ 1.42
UBE2D3-216ENST00000503742 GCOM1H8Y6P7 765 aaPredicted RBP23.89■■□□□ 1.42
UBE2D3-216ENST00000503742 POLR2MP0CAP2 368 aa23.89■■□□□ 1.42
UBE2D3-216ENST00000503742 CCT6AP40227 531 aaKnown RBP23.89■■□□□ 1.42
UBE2D3-216ENST00000503742 PPP1R2P41236 205 aa23.89■■□□□ 1.42
UBE2D3-216ENST00000503742 NBPF12Q5TAG4 269 aaPredicted RBP23.89■■□□□ 1.42
UBE2D3-216ENST00000503742 LDHDQ86WU2 507 aa23.89■■□□□ 1.42
UBE2D3-216ENST00000503742 ABCB11O95342 1321 aa23.89■■□□□ 1.42
UBE2D3-216ENST00000503742 CFBP00751 764 aa23.89■■□□□ 1.41
UBE2D3-216ENST00000503742 FCER1AP12319 257 aa23.89■■□□□ 1.41
UBE2D3-216ENST00000503742 KRT31Q15323 416 aa23.89■■□□□ 1.41
UBE2D3-216ENST00000503742 TCP11X2Q5H9J9 407 aa23.89■■□□□ 1.41
UBE2D3-216ENST00000503742 TTI2Q6NXR4 508 aa23.89■■□□□ 1.41
UBE2D3-216ENST00000503742 IRF2BP1Q8IU81 584 aa23.89■■□□□ 1.41
UBE2D3-216ENST00000503742 UIMC1Q96RL1 719 aa23.89■■□□□ 1.41
UBE2D3-216ENST00000503742 DICER1Q9UPY3 1922 aaKnown RBP23.88■■□□□ 1.41
UBE2D3-216ENST00000503742 TPM2P07951 284 aa23.88■■□□□ 1.41
UBE2D3-216ENST00000503742 FILIP1LQ4L180 1135 aa23.88■■□□□ 1.41
UBE2D3-216ENST00000503742 FCHSD1Q86WN1 690 aa23.88■■□□□ 1.41
UBE2D3-216ENST00000503742 KIAA0895Q8NCT3 520 aa23.88■■□□□ 1.41
UBE2D3-216ENST00000503742 CCDC112Q8NEF3 446 aa23.88■■□□□ 1.41
UBE2D3-216ENST00000503742 DOCK1Q14185 1865 aa23.88■■□□□ 1.41
UBE2D3-216ENST00000503742 IGLV3-22A0A075B6J6 115 aa23.87■■□□□ 1.41
UBE2D3-216ENST00000503742 MSH4O15457 936 aa23.87■■□□□ 1.41
UBE2D3-216ENST00000503742 ZNF112Q9UJU3 913 aa23.87■■□□□ 1.41
UBE2D3-216ENST00000503742 ZNF536O15090 1300 aa23.87■■□□□ 1.41
UBE2D3-216ENST00000503742 KCNJ18B7U540 433 aa23.87■■□□□ 1.41
UBE2D3-216ENST00000503742 NRDCO43847 1150 aa23.87■■□□□ 1.41
UBE2D3-216ENST00000503742 CCNE1P24864 410 aa23.87■■□□□ 1.41
UBE2D3-216ENST00000503742 STAT3P40763 770 aa23.87■■□□□ 1.41
UBE2D3-216ENST00000503742 EHHADHQ08426 723 aa23.87■■□□□ 1.41
UBE2D3-216ENST00000503742 KCNJ12Q14500 433 aa23.87■■□□□ 1.41
UBE2D3-216ENST00000503742 DCAF15Q66K64 600 aa23.87■■□□□ 1.41
UBE2D3-216ENST00000503742 PRPF38AQ8NAV1 312 aaKnown RBP23.87■■□□□ 1.41
UBE2D3-216ENST00000503742 DDX12PQ92771 950 aa23.87■■□□□ 1.41
UBE2D3-216ENST00000503742 THAP9Q9H5L6 903 aa23.87■■□□□ 1.41
UBE2D3-216ENST00000503742 USP27XA6NNY8 438 aa23.86■■□□□ 1.41
UBE2D3-216ENST00000503742 ICAM1P05362 532 aa23.86■■□□□ 1.41
UBE2D3-216ENST00000503742 HOXA7P31268 230 aaPredicted RBP23.86■■□□□ 1.41
UBE2D3-216ENST00000503742 CCAR2Q8N163 923 aaKnown RBP23.86■■□□□ 1.41
UBE2D3-216ENST00000503742 CYP2W1Q8TAV3 490 aa23.86■■□□□ 1.41
UBE2D3-216ENST00000503742 P2RX5Q93086 422 aa23.86■■□□□ 1.41
UBE2D3-216ENST00000503742 DUSP9Q99956 384 aaKnown RBP23.86■■□□□ 1.41
UBE2D3-216ENST00000503742 SLF1Q9BQI6 1058 aa23.86■■□□□ 1.41
UBE2D3-216ENST00000503742 MED24O75448 989 aa23.85■■□□□ 1.41
UBE2D3-216ENST00000503742 COPB1P53618 953 aaKnown RBP23.85■■□□□ 1.41
UBE2D3-216ENST00000503742 DYMQ7RTS9 669 aa23.85■■□□□ 1.41
UBE2D3-216ENST00000503742 APOBEC3FQ8IUX4 373 aaKnown RBP23.85■■□□□ 1.41
UBE2D3-216ENST00000503742 TMEM139Q8IV31 216 aa23.85■■□□□ 1.41
UBE2D3-216ENST00000503742 TC2NQ8N9U0 490 aa23.85■■□□□ 1.41
UBE2D3-216ENST00000503742 NOC3LQ8WTT2 800 aaKnown RBP23.85■■□□□ 1.41
UBE2D3-216ENST00000503742 DNAJC19Q96DA6 116 aa23.85■■□□□ 1.41
UBE2D3-216ENST00000503742 GPRC5DQ9NZD1 345 aa23.85■■□□□ 1.41
UBE2D3-216ENST00000503742 KIAA1024Q9UPX6 916 aa23.85■■□□□ 1.41
UBE2D3-216ENST00000503742 POTEB3A0JP26 581 aa23.85■■□□□ 1.41
UBE2D3-216ENST00000503742 POTECB2RU33 542 aa23.85■■□□□ 1.41
UBE2D3-216ENST00000503742 GOLGA8FQ08AF8 430 aa23.85■■□□□ 1.41
UBE2D3-216ENST00000503742 GOLGA8DPQ0D2H9 430 aa23.85■■□□□ 1.41
UBE2D3-216ENST00000503742 ANGEL2Q5VTE6 544 aaKnown RBP23.85■■□□□ 1.41
UBE2D3-216ENST00000503742 E4F1Q66K89 784 aaPredicted RBP23.85■■□□□ 1.41
UBE2D3-216ENST00000503742 HAUS3Q68CZ6 603 aa23.85■■□□□ 1.41
UBE2D3-216ENST00000503742 POTEBQ6S5H4 581 aa23.85■■□□□ 1.41
UBE2D3-216ENST00000503742 ANKRD20A12PQ8NF67 263 aa23.85■■□□□ 1.41
UBE2D3-216ENST00000503742 TRPM4Q8TD43 1214 aa23.85■■□□□ 1.41
UBE2D3-216ENST00000503742 VAV3Q9UKW4 847 aa23.85■■□□□ 1.41
UBE2D3-216ENST00000503742 BICDL2A1A5D9 508 aa23.84■■□□□ 1.41
UBE2D3-216ENST00000503742 ZNF76P36508 570 aa23.84■■□□□ 1.41
UBE2D3-216ENST00000503742 SAMD1Q6SPF0 538 aaPredicted RBP23.84■■□□□ 1.41
UBE2D3-216ENST00000503742 HPS3Q969F9 1004 aa23.84■■□□□ 1.41
UBE2D3-216ENST00000503742 TRIM47Q96LD4 638 aa23.84■■□□□ 1.41
UBE2D3-216ENST00000503742 AGBL1Q96MI9 1066 aa23.84■■□□□ 1.41
UBE2D3-216ENST00000503742 STK24Q9Y6E0 443 aa23.84■■□□□ 1.41
UBE2D3-216ENST00000503742 ITIH6Q6UXX5 1313 aa23.84■■□□□ 1.41
UBE2D3-216ENST00000503742 E9PMD0 336 aa23.83■■□□□ 1.41
UBE2D3-216ENST00000503742 EEF1GP26641 437 aaKnown RBP23.83■■□□□ 1.41
UBE2D3-216ENST00000503742 PSMD2Q13200 908 aa23.83■■□□□ 1.41
UBE2D3-216ENST00000503742 WDR18Q9BV38 432 aa23.83■■□□□ 1.41
UBE2D3-216ENST00000503742 SRRTQ9BXP5 876 aaKnown RBP23.83■■□□□ 1.41
UBE2D3-216ENST00000503742 EHMT1Q9H9B1 1298 aa23.83■■□□□ 1.41
UBE2D3-216ENST00000503742 SLC39A2Q9NP94 309 aa23.83■■□□□ 1.41
UBE2D3-216ENST00000503742 EMILIN3Q9NT22 766 aa23.83■■□□□ 1.41
UBE2D3-216ENST00000503742 CCPG1Q9ULG6 757 aa23.83■■□□□ 1.41
UBE2D3-216ENST00000503742 N4BP3O15049 544 aa23.83■■□□□ 1.41
UBE2D3-216ENST00000503742 LMNB1P20700 586 aa23.83■■□□□ 1.41
UBE2D3-216ENST00000503742 RPA1P27694 616 aa23.83■■□□□ 1.41
UBE2D3-216ENST00000503742 HSD17B4P51659 736 aa23.83■■□□□ 1.41
UBE2D3-216ENST00000503742 DGKZQ13574 1117 aa23.83■■□□□ 1.41
UBE2D3-216ENST00000503742 ANKRD40Q6AI12 368 aa23.83■■□□□ 1.41
UBE2D3-216ENST00000503742 CATSPER3Q86XQ3 398 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms