RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 JMYQ8N9B5 988 aa7.19□□□□□ -1.26
TMEM39A-212ENST00000497993 NXPE3Q969Y0 559 aa7.19□□□□□ -1.26
TMEM39A-212ENST00000497993 IL17RAQ96F46 866 aa7.19□□□□□ -1.26
TMEM39A-212ENST00000497993 MPHOSPH6Q99547 160 aaKnown RBP7.19□□□□□ -1.26
TMEM39A-212ENST00000497993 ADAM19Q9H013 955 aa7.19□□□□□ -1.26
TMEM39A-212ENST00000497993 PNMA2Q9UL42 364 aa7.19□□□□□ -1.26
TMEM39A-212ENST00000497993 TRIM33Q9UPN9 1127 aa7.19□□□□□ -1.26
TMEM39A-212ENST00000497993 MAP3K2Q9Y2U5 619 aa7.19□□□□□ -1.26
TMEM39A-212ENST00000497993 PTPRCP08575 1304 aa7.19□□□□□ -1.26
TMEM39A-212ENST00000497993 A0A1W2PP55 124 aa7.18□□□□□ -1.26
TMEM39A-212ENST00000497993 LDHAP00338 332 aaKnown RBP7.18□□□□□ -1.26
TMEM39A-212ENST00000497993 CSF1RP07333 972 aa7.18□□□□□ -1.26
TMEM39A-212ENST00000497993 ACPPP15309 386 aa7.18□□□□□ -1.26
TMEM39A-212ENST00000497993 CDC27P30260 824 aa7.18□□□□□ -1.26
TMEM39A-212ENST00000497993 SOX5P35711 763 aa7.18□□□□□ -1.26
TMEM39A-212ENST00000497993 CTSWP56202 376 aa7.18□□□□□ -1.26
TMEM39A-212ENST00000497993 RAC1P63000 192 aa7.18□□□□□ -1.26
TMEM39A-212ENST00000497993 KIAA2012Q0VF49 1180 aa7.18□□□□□ -1.26
TMEM39A-212ENST00000497993 NEXNQ0ZGT2 675 aa7.18□□□□□ -1.26
TMEM39A-212ENST00000497993 GCKRQ14397 625 aa7.18□□□□□ -1.26
TMEM39A-212ENST00000497993 TTF1Q15361 905 aaPredicted RBP7.18□□□□□ -1.26
TMEM39A-212ENST00000497993 FOXD4L6Q3SYB3 417 aaPredicted RBP7.18□□□□□ -1.26
TMEM39A-212ENST00000497993 BEND3Q5T5X7 828 aa7.18□□□□□ -1.26
TMEM39A-212ENST00000497993 FOXD4L3Q6VB84 417 aaPredicted RBP7.18□□□□□ -1.26
TMEM39A-212ENST00000497993 DDX46Q7L014 1031 aaKnown RBP7.18□□□□□ -1.26
TMEM39A-212ENST00000497993 SV2BQ7L1I2 683 aa7.18□□□□□ -1.26
TMEM39A-212ENST00000497993 DMRTC2Q8IXT2 367 aaPredicted RBP7.18□□□□□ -1.26
TMEM39A-212ENST00000497993 NME8Q8N427 588 aa7.18□□□□□ -1.26
TMEM39A-212ENST00000497993 SUPT20HQ8NEM7 779 aa7.18□□□□□ -1.26
TMEM39A-212ENST00000497993 MFSD3Q96ES6 412 aa7.18□□□□□ -1.26
TMEM39A-212ENST00000497993 FAM89AQ96GI7 184 aa7.18□□□□□ -1.26
TMEM39A-212ENST00000497993 RHOVQ96L33 236 aa7.18□□□□□ -1.26
TMEM39A-212ENST00000497993 NAP1L4Q99733 375 aaKnown RBP7.18□□□□□ -1.26
TMEM39A-212ENST00000497993 MYD88Q99836 296 aa7.18□□□□□ -1.26
TMEM39A-212ENST00000497993 BHLHE41Q9C0J9 482 aaPredicted RBP7.18□□□□□ -1.26
TMEM39A-212ENST00000497993 CAAP1Q9H8G2 361 aa7.18□□□□□ -1.26
TMEM39A-212ENST00000497993 ARNT2Q9HBZ2 717 aa7.18□□□□□ -1.26
TMEM39A-212ENST00000497993 NMRK2Q9NPI5 230 aa7.18□□□□□ -1.26
TMEM39A-212ENST00000497993 LATS2Q9NRM7 1088 aa7.18□□□□□ -1.26
TMEM39A-212ENST00000497993 PTCH2Q9Y6C5 1203 aa7.18□□□□□ -1.26
TMEM39A-212ENST00000497993 CCDC189A1A4V9 331 aa7.17□□□□□ -1.26
TMEM39A-212ENST00000497993 F6X3S4 739 aa7.17□□□□□ -1.26
TMEM39A-212ENST00000497993 SPATA31C1P0DKV0 1188 aa7.17□□□□□ -1.26
TMEM39A-212ENST00000497993 VEGFAP15692 232 aaPredicted RBP7.17□□□□□ -1.26
TMEM39A-212ENST00000497993 COL8A1P27658 744 aa7.17□□□□□ -1.26
TMEM39A-212ENST00000497993 STAT3P40763 770 aa7.17□□□□□ -1.26
TMEM39A-212ENST00000497993 GRM2Q14416 872 aa7.17□□□□□ -1.26
TMEM39A-212ENST00000497993 DHX8Q14562 1220 aaKnown RBP7.17□□□□□ -1.26
TMEM39A-212ENST00000497993 CCDC152Q4G0S7 254 aa7.17□□□□□ -1.26
TMEM39A-212ENST00000497993 CCDC81Q6ZN84 652 aa7.17□□□□□ -1.26
TMEM39A-212ENST00000497993 MAP4K3Q8IVH8 894 aa7.17□□□□□ -1.26
TMEM39A-212ENST00000497993 SLITRK4Q8IW52 837 aa7.17□□□□□ -1.26
TMEM39A-212ENST00000497993 RAVER1Q8IY67 606 aaKnown RBP7.17□□□□□ -1.26
TMEM39A-212ENST00000497993 GPC2Q8N158 579 aa7.17□□□□□ -1.26
TMEM39A-212ENST00000497993 PHC3Q8NDX5 983 aa7.17□□□□□ -1.26
TMEM39A-212ENST00000497993 ZSWIM2Q8NEG5 633 aa7.17□□□□□ -1.26
TMEM39A-212ENST00000497993 TTLL11Q8NHH1 800 aa7.17□□□□□ -1.26
TMEM39A-212ENST00000497993 UBP1Q9NZI7 540 aa7.17□□□□□ -1.26
TMEM39A-212ENST00000497993 A0A0A0MRY4 1105 aa7.16□□□□□ -1.26
TMEM39A-212ENST00000497993 IQCA1LA6NCM1 817 aa7.16□□□□□ -1.26
TMEM39A-212ENST00000497993 IFRD1O00458 451 aaPredicted RBP7.16□□□□□ -1.26
TMEM39A-212ENST00000497993 TRPA1O75762 1119 aa7.16□□□□□ -1.26
TMEM39A-212ENST00000497993 HSPA6P17066 643 aa7.16□□□□□ -1.26
TMEM39A-212ENST00000497993 GIPRP48546 466 aa7.16□□□□□ -1.26
TMEM39A-212ENST00000497993 GSK3AP49840 483 aa7.16□□□□□ -1.26
TMEM39A-212ENST00000497993 RPS8P62241 208 aaKnown RBP7.16□□□□□ -1.26
TMEM39A-212ENST00000497993 CWF19L2Q2TBE0 894 aaKnown RBP7.16□□□□□ -1.26
TMEM39A-212ENST00000497993 RABL6Q3YEC7 729 aaPredicted RBP7.16□□□□□ -1.26
TMEM39A-212ENST00000497993 TM4SF20Q53R12 229 aa7.16□□□□□ -1.26
TMEM39A-212ENST00000497993 WWC2Q6AWC2 1192 aa7.16□□□□□ -1.26
TMEM39A-212ENST00000497993 OLFM4Q6UX06 510 aa7.16□□□□□ -1.26
TMEM39A-212ENST00000497993 DDX42Q86XP3 938 aaKnown RBP eCLIP7.16□□□□□ -1.26
TMEM39A-212ENST00000497993 CCNJLQ8IV13 435 aa7.16□□□□□ -1.26
TMEM39A-212ENST00000497993 C3orf58Q8NDZ4 430 aa7.16□□□□□ -1.26
TMEM39A-212ENST00000497993 BSNDQ8WZ55 320 aa7.16□□□□□ -1.26
TMEM39A-212ENST00000497993 CELF1Q92879 486 aaKnown RBP7.16□□□□□ -1.26
TMEM39A-212ENST00000497993 ZNF669Q96BR6 464 aaPredicted RBP7.16□□□□□ -1.26
TMEM39A-212ENST00000497993 LACRTQ9GZZ8 138 aa7.16□□□□□ -1.26
TMEM39A-212ENST00000497993 ZNF700Q9H0M5 742 aa7.16□□□□□ -1.26
TMEM39A-212ENST00000497993 EHD4Q9H223 541 aa7.16□□□□□ -1.26
TMEM39A-212ENST00000497993 LIN7BQ9HAP6 207 aa7.16□□□□□ -1.26
TMEM39A-212ENST00000497993 ZNF541Q9H0D2 1346 aa7.16□□□□□ -1.26
TMEM39A-212ENST00000497993 IRS2Q9Y4H2 1338 aa7.16□□□□□ -1.26
TMEM39A-212ENST00000497993 MED23Q9ULK4 1368 aa7.16□□□□□ -1.26
TMEM39A-212ENST00000497993 MYCLP1P12525 358 aaPredicted RBP7.15□□□□□ -1.26
TMEM39A-212ENST00000497993 NFKB2Q00653 900 aa7.15□□□□□ -1.26
TMEM39A-212ENST00000497993 LMNB2Q03252 620 aa7.15□□□□□ -1.26
TMEM39A-212ENST00000497993 FAM160A1Q05DH4 1040 aa7.15□□□□□ -1.26
TMEM39A-212ENST00000497993 SSRP1Q08945 709 aaKnown RBP7.15□□□□□ -1.26
TMEM39A-212ENST00000497993 MAP3K11Q16584 847 aa7.15□□□□□ -1.26
TMEM39A-212ENST00000497993 LARP1BQ659C4 914 aaKnown RBP7.15□□□□□ -1.26
TMEM39A-212ENST00000497993 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.15□□□□□ -1.26
TMEM39A-212ENST00000497993 C15orf52Q6ZUT6 534 aaKnown RBP7.15□□□□□ -1.26
TMEM39A-212ENST00000497993 SLC51AQ86UW1 340 aa7.15□□□□□ -1.26
TMEM39A-212ENST00000497993 FBXO11Q86XK2 927 aa7.15□□□□□ -1.26
TMEM39A-212ENST00000497993 THNSL2Q86YJ6 484 aa7.15□□□□□ -1.26
TMEM39A-212ENST00000497993 NIM1KQ8IY84 436 aa7.15□□□□□ -1.26
TMEM39A-212ENST00000497993 FMR1NBQ8N0W7 255 aaPredicted RBP7.15□□□□□ -1.26
TMEM39A-212ENST00000497993 TMEM151AQ8N4L1 468 aa7.15□□□□□ -1.26
TMEM39A-212ENST00000497993 FAM169BQ8N8A8 192 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms