RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 TM6SF1Q9BZW5 370 aa11.84□□□□□ -0.51
RAB11FIP3-211ENST00000495663 ALG2Q9H553 416 aa11.84□□□□□ -0.51
RAB11FIP3-211ENST00000495663 TMOD4Q9NZQ9 345 aa11.84□□□□□ -0.51
RAB11FIP3-211ENST00000495663 PCNTO95613 3336 aa11.84□□□□□ -0.51
RAB11FIP3-211ENST00000495663 CCL15-CCL14A0A0B4J2E2 113 aa11.83□□□□□ -0.52
RAB11FIP3-211ENST00000495663 ATXN7O15265 892 aaPredicted RBP11.83□□□□□ -0.52
RAB11FIP3-211ENST00000495663 AOC2O75106 756 aa11.83□□□□□ -0.52
RAB11FIP3-211ENST00000495663 TOP1P11387 765 aaKnown RBP11.83□□□□□ -0.52
RAB11FIP3-211ENST00000495663 MAP2K2P36507 400 aa11.83□□□□□ -0.52
RAB11FIP3-211ENST00000495663 EXOSC10Q01780 885 aaKnown RBP11.83□□□□□ -0.52
RAB11FIP3-211ENST00000495663 KIF23Q02241 960 aaPredicted RBP11.83□□□□□ -0.52
RAB11FIP3-211ENST00000495663 NCOA4Q13772 614 aa11.83□□□□□ -0.52
RAB11FIP3-211ENST00000495663 WTAPQ15007 396 aa11.83□□□□□ -0.52
RAB11FIP3-211ENST00000495663 MTFR1Q15390 333 aa11.83□□□□□ -0.52
RAB11FIP3-211ENST00000495663 SEC23AQ15436 765 aa11.83□□□□□ -0.52
RAB11FIP3-211ENST00000495663 CCL15Q16663 113 aa11.83□□□□□ -0.52
RAB11FIP3-211ENST00000495663 TMEM67Q5HYA8 995 aa11.83□□□□□ -0.52
RAB11FIP3-211ENST00000495663 IFIT1BQ5T764 474 aaKnown RBP11.83□□□□□ -0.52
RAB11FIP3-211ENST00000495663 RCSD1Q6JBY9 416 aa11.83□□□□□ -0.52
RAB11FIP3-211ENST00000495663 GADL1Q6ZQY3 521 aa11.83□□□□□ -0.52
RAB11FIP3-211ENST00000495663 RUFY3Q7L099 469 aa11.83□□□□□ -0.52
RAB11FIP3-211ENST00000495663 ENAHQ8N8S7 591 aaPredicted RBP11.83□□□□□ -0.52
RAB11FIP3-211ENST00000495663 ANKS1AQ92625 1134 aa11.83□□□□□ -0.52
RAB11FIP3-211ENST00000495663 IL17RAQ96F46 866 aa11.83□□□□□ -0.52
RAB11FIP3-211ENST00000495663 C12orf42Q96LP6 360 aa11.83□□□□□ -0.52
RAB11FIP3-211ENST00000495663 VCPKMTQ9H867 229 aa11.83□□□□□ -0.52
RAB11FIP3-211ENST00000495663 KAT14Q9H8E8 782 aa11.83□□□□□ -0.52
RAB11FIP3-211ENST00000495663 NOD1Q9Y239 953 aa11.83□□□□□ -0.52
RAB11FIP3-211ENST00000495663 CYP46A1Q9Y6A2 500 aa11.83□□□□□ -0.52
RAB11FIP3-211ENST00000495663 CDK2AP1O14519 115 aa11.82□□□□□ -0.52
RAB11FIP3-211ENST00000495663 RAD21O60216 631 aa11.82□□□□□ -0.52
RAB11FIP3-211ENST00000495663 CD33P20138 364 aa11.82□□□□□ -0.52
RAB11FIP3-211ENST00000495663 RPS6KB1P23443 525 aa11.82□□□□□ -0.52
RAB11FIP3-211ENST00000495663 FGD1P98174 961 aa11.82□□□□□ -0.52
RAB11FIP3-211ENST00000495663 COL9A3Q14050 684 aaPredicted RBP11.82□□□□□ -0.52
RAB11FIP3-211ENST00000495663 SLCO4C1Q6ZQN7 724 aa11.82□□□□□ -0.52
RAB11FIP3-211ENST00000495663 NLRP8Q86W28 1048 aa11.82□□□□□ -0.52
RAB11FIP3-211ENST00000495663 LRRC47Q8N1G4 583 aaKnown RBP11.82□□□□□ -0.52
RAB11FIP3-211ENST00000495663 TMTC2Q8N394 836 aa11.82□□□□□ -0.52
RAB11FIP3-211ENST00000495663 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.82□□□□□ -0.52
RAB11FIP3-211ENST00000495663 GMCL1P1Q8NEA9 526 aa11.82□□□□□ -0.52
RAB11FIP3-211ENST00000495663 IGDCC4Q8TDY8 1250 aa11.82□□□□□ -0.52
RAB11FIP3-211ENST00000495663 LPAR1Q92633 364 aa11.82□□□□□ -0.52
RAB11FIP3-211ENST00000495663 TBC1D32Q96NH3 1257 aa11.82□□□□□ -0.52
RAB11FIP3-211ENST00000495663 SPOCK3Q9BQ16 436 aa11.82□□□□□ -0.52
RAB11FIP3-211ENST00000495663 TMEM47Q9BQJ4 181 aa11.82□□□□□ -0.52
RAB11FIP3-211ENST00000495663 HCN2Q9UL51 889 aa11.82□□□□□ -0.52
RAB11FIP3-211ENST00000495663 MKL2Q9ULH7 1088 aa11.82□□□□□ -0.52
RAB11FIP3-211ENST00000495663 PARP14Q460N5 1801 aa11.81□□□□□ -0.52
RAB11FIP3-211ENST00000495663 F5H6K3 240 aa11.81□□□□□ -0.52
RAB11FIP3-211ENST00000495663 SH2B2O14492 632 aaPredicted RBP11.81□□□□□ -0.52
RAB11FIP3-211ENST00000495663 MSTNO14793 375 aa11.81□□□□□ -0.52
RAB11FIP3-211ENST00000495663 CPA1P15085 419 aa11.81□□□□□ -0.52
RAB11FIP3-211ENST00000495663 LIFRP42702 1097 aa11.81□□□□□ -0.52
RAB11FIP3-211ENST00000495663 TM4SF4P48230 202 aa11.81□□□□□ -0.52
RAB11FIP3-211ENST00000495663 KLRC3Q07444 240 aa11.81□□□□□ -0.52
RAB11FIP3-211ENST00000495663 PABPC4Q13310 644 aaKnown RBP eCLIP11.81□□□□□ -0.52
RAB11FIP3-211ENST00000495663 DGKZQ13574 1117 aa11.81□□□□□ -0.52
RAB11FIP3-211ENST00000495663 OTUD7BQ6GQQ9 843 aa11.81□□□□□ -0.52
RAB11FIP3-211ENST00000495663 BRI3BPQ8WY22 251 aa11.81□□□□□ -0.52
RAB11FIP3-211ENST00000495663 TCEANC2Q96MN5 208 aa11.81□□□□□ -0.52
RAB11FIP3-211ENST00000495663 ZIC5Q96T25 663 aa11.81□□□□□ -0.52
RAB11FIP3-211ENST00000495663 LRRC2Q9BYS8 371 aa11.81□□□□□ -0.52
RAB11FIP3-211ENST00000495663 UPF3BQ9BZI7 483 aaKnown RBP11.81□□□□□ -0.52
RAB11FIP3-211ENST00000495663 LY9Q9HBG7 655 aa11.81□□□□□ -0.52
RAB11FIP3-211ENST00000495663 AGTPBP1Q9UPW5 1226 aa11.81□□□□□ -0.52
RAB11FIP3-211ENST00000495663 CCDC69A6NI79 296 aa11.8□□□□□ -0.52
RAB11FIP3-211ENST00000495663 POM121CA8CG34 1229 aa11.8□□□□□ -0.52
RAB11FIP3-211ENST00000495663 KHNYNO15037 678 aaKnown RBP11.8□□□□□ -0.52
RAB11FIP3-211ENST00000495663 WDR46O15213 610 aaKnown RBP11.8□□□□□ -0.52
RAB11FIP3-211ENST00000495663 NDUFB10O96000 172 aa11.8□□□□□ -0.52
RAB11FIP3-211ENST00000495663 MAPTP10636 758 aaKnown RBP11.8□□□□□ -0.52
RAB11FIP3-211ENST00000495663 VCAM1P19320 739 aa11.8□□□□□ -0.52
RAB11FIP3-211ENST00000495663 MOGSQ13724 837 aa11.8□□□□□ -0.52
RAB11FIP3-211ENST00000495663 SLFN13Q68D06 897 aa11.8□□□□□ -0.52
RAB11FIP3-211ENST00000495663 NFXL1Q6ZNB6 911 aa11.8□□□□□ -0.52
RAB11FIP3-211ENST00000495663 Q6ZUG5 572 aa11.8□□□□□ -0.52
RAB11FIP3-211ENST00000495663 ANKRD23Q86SG2 305 aa11.8□□□□□ -0.52
RAB11FIP3-211ENST00000495663 SPICE1Q8N0Z3 855 aa11.8□□□□□ -0.52
RAB11FIP3-211ENST00000495663 ZCCHC17Q9NP64 241 aaKnown RBP11.8□□□□□ -0.52
RAB11FIP3-211ENST00000495663 ZNF358Q9NW07 568 aa11.8□□□□□ -0.52
RAB11FIP3-211ENST00000495663 MTMR7Q9Y216 660 aa11.8□□□□□ -0.52
RAB11FIP3-211ENST00000495663 USP17L15C9J2P7 530 aa11.79□□□□□ -0.52
RAB11FIP3-211ENST00000495663 BTBD19C9JJ37 291 aa11.79□□□□□ -0.52
RAB11FIP3-211ENST00000495663 USP17L13C9JLJ4 530 aa11.79□□□□□ -0.52
RAB11FIP3-211ENST00000495663 USP17L11C9JVI0 530 aa11.79□□□□□ -0.52
RAB11FIP3-211ENST00000495663 USP17L18D6R9N7 530 aa11.79□□□□□ -0.52
RAB11FIP3-211ENST00000495663 USP17L22D6RA61 530 aa11.79□□□□□ -0.52
RAB11FIP3-211ENST00000495663 USP17L17D6RBQ6 530 aa11.79□□□□□ -0.52
RAB11FIP3-211ENST00000495663 USP17L19D6RCP7 530 aa11.79□□□□□ -0.52
RAB11FIP3-211ENST00000495663 USP17L20D6RJB6 530 aa11.79□□□□□ -0.52
RAB11FIP3-211ENST00000495663 SLC1A4P43007 532 aa11.79□□□□□ -0.52
RAB11FIP3-211ENST00000495663 USP17L24Q0WX57 530 aa11.79□□□□□ -0.52
RAB11FIP3-211ENST00000495663 KIAA1755Q5JYT7 1200 aa11.79□□□□□ -0.52
RAB11FIP3-211ENST00000495663 TBCELQ5QJ74 424 aa11.79□□□□□ -0.52
RAB11FIP3-211ENST00000495663 TREML2Q5T2D2 321 aa11.79□□□□□ -0.52
RAB11FIP3-211ENST00000495663 SYNE3Q6ZMZ3 975 aa11.79□□□□□ -0.52
RAB11FIP3-211ENST00000495663 CATIPQ7Z7H3 387 aa11.79□□□□□ -0.52
RAB11FIP3-211ENST00000495663 SGMS1Q86VZ5 419 aa11.79□□□□□ -0.52
RAB11FIP3-211ENST00000495663 FBXL16Q8N461 479 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms