RNA–Protein interactions for RNA: ENST00000494569.5

ZIC4-216, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,317 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-216ENST00000494569 GIMAP8Q8ND71 665 aaPredicted RBP12.37□□□□□ -0.43
ZIC4-216ENST00000494569 STAMQ92783 540 aa12.37□□□□□ -0.43
ZIC4-216ENST00000494569 RMND1Q9NWS8 449 aa12.37□□□□□ -0.43
ZIC4-216ENST00000494569 PCDHA1Q9Y5I3 950 aa12.37□□□□□ -0.43
ZIC4-216ENST00000494569 EGFRP00533 1210 aa12.37□□□□□ -0.43
ZIC4-216ENST00000494569 CYP3A4P08684 503 aa12.37□□□□□ -0.43
ZIC4-216ENST00000494569 CIITAP33076 1130 aa12.37□□□□□ -0.43
ZIC4-216ENST00000494569 ATP2B2Q01814 1243 aa12.37□□□□□ -0.43
ZIC4-216ENST00000494569 SPIRE1Q08AE8 756 aa12.37□□□□□ -0.43
ZIC4-216ENST00000494569 TRMT44Q8IYL2 757 aaKnown RBP12.37□□□□□ -0.43
ZIC4-216ENST00000494569 ETNPPLQ8TBG4 499 aa12.37□□□□□ -0.43
ZIC4-216ENST00000494569 AMNQ9BXJ7 453 aa12.37□□□□□ -0.43
ZIC4-216ENST00000494569 SIP14410 1827 aa12.37□□□□□ -0.43
ZIC4-216ENST00000494569 SYNRGQ9UMZ2 1314 aa12.36□□□□□ -0.43
ZIC4-216ENST00000494569 TECP42680 631 aa12.36□□□□□ -0.43
ZIC4-216ENST00000494569 UBASH3AP57075 661 aa12.36□□□□□ -0.43
ZIC4-216ENST00000494569 GHRHRQ02643 423 aa12.36□□□□□ -0.43
ZIC4-216ENST00000494569 DHX8Q14562 1220 aaKnown RBP12.36□□□□□ -0.43
ZIC4-216ENST00000494569 TNIP1Q15025 636 aa12.36□□□□□ -0.43
ZIC4-216ENST00000494569 C16orf45Q96MC5 204 aaPredicted RBP12.36□□□□□ -0.43
ZIC4-216ENST00000494569 TRIM9Q9C026 710 aa12.36□□□□□ -0.43
ZIC4-216ENST00000494569 VCPKMTQ9H867 229 aa12.36□□□□□ -0.43
ZIC4-216ENST00000494569 LIMA1Q9UHB6 759 aaKnown RBP12.36□□□□□ -0.43
ZIC4-216ENST00000494569 OTOFQ9HC10 1997 aa12.36□□□□□ -0.43
ZIC4-216ENST00000494569 SREBF1P36956 1147 aa12.36□□□□□ -0.43
ZIC4-216ENST00000494569 UBA7P41226 1012 aa12.36□□□□□ -0.43
ZIC4-216ENST00000494569 KMT5BQ4FZB7 885 aa12.36□□□□□ -0.43
ZIC4-216ENST00000494569 DRC7Q8IY82 874 aa12.36□□□□□ -0.43
ZIC4-216ENST00000494569 SMYD4Q8IYR2 804 aaPredicted RBP12.36□□□□□ -0.43
ZIC4-216ENST00000494569 ANO3Q9BYT9 981 aa12.36□□□□□ -0.43
ZIC4-216ENST00000494569 GINM1Q9NU53 330 aa12.36□□□□□ -0.43
ZIC4-216ENST00000494569 STK17AQ9UEE5 414 aa12.36□□□□□ -0.43
ZIC4-216ENST00000494569 ZHX1Q9UKY1 873 aaPredicted RBP12.36□□□□□ -0.43
ZIC4-216ENST00000494569 PTPRFP10586 1907 aa12.36□□□□□ -0.43
ZIC4-216ENST00000494569 USP17L15C9J2P7 530 aa12.36□□□□□ -0.43
ZIC4-216ENST00000494569 USP17L13C9JLJ4 530 aa12.36□□□□□ -0.43
ZIC4-216ENST00000494569 USP17L11C9JVI0 530 aa12.36□□□□□ -0.43
ZIC4-216ENST00000494569 USP17L18D6R9N7 530 aa12.36□□□□□ -0.43
ZIC4-216ENST00000494569 USP17L22D6RA61 530 aa12.36□□□□□ -0.43
ZIC4-216ENST00000494569 USP17L17D6RBQ6 530 aa12.36□□□□□ -0.43
ZIC4-216ENST00000494569 USP17L19D6RCP7 530 aa12.36□□□□□ -0.43
ZIC4-216ENST00000494569 USP17L20D6RJB6 530 aa12.36□□□□□ -0.43
ZIC4-216ENST00000494569 USP17L24Q0WX57 530 aa12.36□□□□□ -0.43
ZIC4-216ENST00000494569 ECM1Q16610 540 aa12.36□□□□□ -0.43
ZIC4-216ENST00000494569 USP17L6PQ6QN14 398 aa12.36□□□□□ -0.43
ZIC4-216ENST00000494569 FBXO11Q86XK2 927 aa12.36□□□□□ -0.43
ZIC4-216ENST00000494569 CCAR2Q8N163 923 aaKnown RBP12.36□□□□□ -0.43
ZIC4-216ENST00000494569 CCDC150Q8NCX0 1101 aa12.36□□□□□ -0.43
ZIC4-216ENST00000494569 NUDT12Q9BQG2 462 aa12.36□□□□□ -0.43
ZIC4-216ENST00000494569 ARHGEF10LQ9HCE6 1279 aa12.36□□□□□ -0.43
ZIC4-216ENST00000494569 ADD3Q9UEY8 706 aaKnown RBP12.36□□□□□ -0.43
ZIC4-216ENST00000494569 DDX25Q9UHL0 483 aaKnown RBP12.36□□□□□ -0.43
ZIC4-216ENST00000494569 PRCPP42785 496 aa12.35□□□□□ -0.43
ZIC4-216ENST00000494569 TRIM65Q6PJ69 517 aa12.35□□□□□ -0.43
ZIC4-216ENST00000494569 TC2NQ8N9U0 490 aa12.35□□□□□ -0.43
ZIC4-216ENST00000494569 ANKRD7Q92527 254 aa12.35□□□□□ -0.43
ZIC4-216ENST00000494569 CCDC94Q9BW85 323 aaPredicted RBP12.35□□□□□ -0.43
ZIC4-216ENST00000494569 GOPCQ9HD26 462 aa12.35□□□□□ -0.43
ZIC4-216ENST00000494569 TBX3O15119 743 aa12.34□□□□□ -0.43
ZIC4-216ENST00000494569 TMC6Q7Z403 805 aa12.34□□□□□ -0.43
ZIC4-216ENST00000494569 REXO1L1PQ8IX06 675 aa12.34□□□□□ -0.43
ZIC4-216ENST00000494569 GDAQ9Y2T3 454 aa12.34□□□□□ -0.43
ZIC4-216ENST00000494569 ITIH6Q6UXX5 1313 aa12.34□□□□□ -0.43
ZIC4-216ENST00000494569 TXKP42681 527 aa12.34□□□□□ -0.43
ZIC4-216ENST00000494569 TNNI2P48788 182 aa12.34□□□□□ -0.43
ZIC4-216ENST00000494569 EAPPQ56P03 285 aaPredicted RBP12.34□□□□□ -0.43
ZIC4-216ENST00000494569 MTERF4Q7Z6M4 381 aaKnown RBP12.34□□□□□ -0.43
ZIC4-216ENST00000494569 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.34□□□□□ -0.43
ZIC4-216ENST00000494569 ZNF112Q9UJU3 913 aa12.34□□□□□ -0.43
ZIC4-216ENST00000494569 SSC5DA1L4H1 1573 aa12.34□□□□□ -0.43
ZIC4-216ENST00000494569 HOXA7P31268 230 aaPredicted RBP12.34□□□□□ -0.43
ZIC4-216ENST00000494569 STAT2P52630 851 aa12.34□□□□□ -0.43
ZIC4-216ENST00000494569 SNAP25P60880 206 aa12.34□□□□□ -0.43
ZIC4-216ENST00000494569 MLLT1Q03111 559 aaPredicted RBP12.34□□□□□ -0.43
ZIC4-216ENST00000494569 PLCD3Q8N3E9 789 aa12.34□□□□□ -0.43
ZIC4-216ENST00000494569 RAD54LQ92698 747 aa12.34□□□□□ -0.43
ZIC4-216ENST00000494569 GLIS2Q9BZE0 524 aaPredicted RBP12.34□□□□□ -0.43
ZIC4-216ENST00000494569 LRWD1Q9UFC0 647 aa12.34□□□□□ -0.43
ZIC4-216ENST00000494569 CLEC11AQ9Y240 323 aa12.34□□□□□ -0.43
ZIC4-216ENST00000494569 IGLV3-22A0A075B6J6 115 aa12.33□□□□□ -0.44
ZIC4-216ENST00000494569 FOSP01100 380 aaPredicted RBP12.33□□□□□ -0.44
ZIC4-216ENST00000494569 NAA30Q147X3 362 aaPredicted RBP12.33□□□□□ -0.44
ZIC4-216ENST00000494569 TTI2Q6NXR4 508 aa12.33□□□□□ -0.44
ZIC4-216ENST00000494569 FOXR2Q6PJQ5 311 aa12.33□□□□□ -0.44
ZIC4-216ENST00000494569 KCNK18Q7Z418 384 aa12.33□□□□□ -0.44
ZIC4-216ENST00000494569 CTNND2Q9UQB3 1225 aa12.33□□□□□ -0.44
ZIC4-216ENST00000494569 ZNF536O15090 1300 aa12.33□□□□□ -0.44
ZIC4-216ENST00000494569 CA12O43570 354 aa12.33□□□□□ -0.44
ZIC4-216ENST00000494569 PMS1P54277 932 aaKnown RBP12.33□□□□□ -0.44
ZIC4-216ENST00000494569 PAK1Q13153 545 aa12.33□□□□□ -0.44
ZIC4-216ENST00000494569 MAPK8IP2Q13387 824 aaPredicted RBP12.33□□□□□ -0.44
ZIC4-216ENST00000494569 RASA3Q14644 834 aa12.33□□□□□ -0.44
ZIC4-216ENST00000494569 SYCP1Q15431 976 aa12.33□□□□□ -0.44
ZIC4-216ENST00000494569 FAM83BQ5T0W9 1011 aa12.33□□□□□ -0.44
ZIC4-216ENST00000494569 HHIPL1Q96JK4 782 aa12.33□□□□□ -0.44
ZIC4-216ENST00000494569 DUSP9Q99956 384 aaKnown RBP12.33□□□□□ -0.44
ZIC4-216ENST00000494569 GTPBP4Q9BZE4 634 aaKnown RBP12.33□□□□□ -0.44
ZIC4-216ENST00000494569 POTEMA6NI47 508 aa12.32□□□□□ -0.44
ZIC4-216ENST00000494569 TAL1P17542 331 aaPredicted RBP12.32□□□□□ -0.44
ZIC4-216ENST00000494569 MAP2K2P36507 400 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms