RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 TRMT13Q9NUP7 481 aaKnown RBP9.92□□□□□ -0.82
LRCH3-219ENST00000494069 SH2B2O14492 632 aaPredicted RBP9.91□□□□□ -0.82
LRCH3-219ENST00000494069 TLR3O15455 904 aaKnown RBP9.91□□□□□ -0.82
LRCH3-219ENST00000494069 SORBS3O60504 671 aa9.91□□□□□ -0.82
LRCH3-219ENST00000494069 RGS20O76081 388 aa9.91□□□□□ -0.82
LRCH3-219ENST00000494069 NR3C2P08235 984 aa9.91□□□□□ -0.82
LRCH3-219ENST00000494069 CHRM1P11229 460 aaPredicted RBP9.91□□□□□ -0.82
LRCH3-219ENST00000494069 CYP2C9P11712 490 aa9.91□□□□□ -0.82
LRCH3-219ENST00000494069 CCL23P55773 120 aa9.91□□□□□ -0.82
LRCH3-219ENST00000494069 GHRHRQ02643 423 aa9.91□□□□□ -0.82
LRCH3-219ENST00000494069 TTLL4Q14679 1199 aa9.91□□□□□ -0.82
LRCH3-219ENST00000494069 SART3Q15020 963 aaKnown RBP9.91□□□□□ -0.82
LRCH3-219ENST00000494069 STXBP2Q15833 593 aa9.91□□□□□ -0.82
LRCH3-219ENST00000494069 BMP2KLQ5H9B9 411 aa9.91□□□□□ -0.82
LRCH3-219ENST00000494069 TMEM240Q5SV17 173 aa9.91□□□□□ -0.82
LRCH3-219ENST00000494069 FCHSD1Q86WN1 690 aa9.91□□□□□ -0.82
LRCH3-219ENST00000494069 ZNF654Q8IZM8 581 aa9.91□□□□□ -0.82
LRCH3-219ENST00000494069 CMTR1Q8N1G2 835 aaKnown RBP9.91□□□□□ -0.82
LRCH3-219ENST00000494069 AFG1LQ8WV93 481 aa9.91□□□□□ -0.82
LRCH3-219ENST00000494069 GUCD1Q96NT3 240 aa9.91□□□□□ -0.82
LRCH3-219ENST00000494069 MTG1Q9BT17 334 aaPredicted RBP9.91□□□□□ -0.82
LRCH3-219ENST00000494069 ALDH8A1Q9H2A2 487 aaPredicted RBP9.91□□□□□ -0.82
LRCH3-219ENST00000494069 HIPK3Q9H422 1215 aa9.91□□□□□ -0.82
LRCH3-219ENST00000494069 MYH6P13533 1939 aa9.9□□□□□ -0.82
LRCH3-219ENST00000494069 PNMA6FA0A0J9YX94 578 aa9.9□□□□□ -0.82
LRCH3-219ENST00000494069 A6NJR5 290 aa9.9□□□□□ -0.82
LRCH3-219ENST00000494069 GRXCR1A8MXD5 290 aa9.9□□□□□ -0.82
LRCH3-219ENST00000494069 B4DLN1 442 aa9.9□□□□□ -0.82
LRCH3-219ENST00000494069 NKRFO15226 690 aaKnown RBP eCLIP9.9□□□□□ -0.82
LRCH3-219ENST00000494069 PLEKHA8P1O95397 391 aa9.9□□□□□ -0.82
LRCH3-219ENST00000494069 C7P10643 843 aa9.9□□□□□ -0.82
LRCH3-219ENST00000494069 MYCLP12524 364 aaPredicted RBP9.9□□□□□ -0.82
LRCH3-219ENST00000494069 CPT1AP50416 773 aa9.9□□□□□ -0.82
LRCH3-219ENST00000494069 MRPL12P52815 198 aaKnown RBP9.9□□□□□ -0.82
LRCH3-219ENST00000494069 CHMP4BP1P59074 171 aa9.9□□□□□ -0.82
LRCH3-219ENST00000494069 ARHGAP1Q07960 439 aa9.9□□□□□ -0.82
LRCH3-219ENST00000494069 NBPF20Q3BBV1 942 aa9.9□□□□□ -0.82
LRCH3-219ENST00000494069 CASC1Q6TDU7 716 aa9.9□□□□□ -0.82
LRCH3-219ENST00000494069 ZNF365Q70YC5 407 aa9.9□□□□□ -0.82
LRCH3-219ENST00000494069 SRBD1Q8N5C6 995 aaKnown RBP9.9□□□□□ -0.82
LRCH3-219ENST00000494069 GPKOWQ92917 476 aaPredicted RBP eCLIP9.9□□□□□ -0.82
LRCH3-219ENST00000494069 VWCEQ96DN2 955 aa9.9□□□□□ -0.82
LRCH3-219ENST00000494069 TCEANC2Q96MN5 208 aa9.9□□□□□ -0.82
LRCH3-219ENST00000494069 IWS1Q96ST2 819 aa9.9□□□□□ -0.82
LRCH3-219ENST00000494069 MPHOSPH6Q99547 160 aaKnown RBP9.9□□□□□ -0.82
LRCH3-219ENST00000494069 PDCD2LQ9BRP1 358 aa9.9□□□□□ -0.82
LRCH3-219ENST00000494069 NOC4LQ9BVI4 516 aaKnown RBP9.9□□□□□ -0.82
LRCH3-219ENST00000494069 WNT8AQ9H1J5 351 aa9.9□□□□□ -0.82
LRCH3-219ENST00000494069 TTYH1Q9H313 450 aaPredicted RBP9.9□□□□□ -0.82
LRCH3-219ENST00000494069 POLR3EQ9NVU0 708 aa9.9□□□□□ -0.82
LRCH3-219ENST00000494069 DDX41Q9UJV9 622 aaKnown RBP9.9□□□□□ -0.82
LRCH3-219ENST00000494069 hCG_1642624A0A1W2PR95 340 aa9.89□□□□□ -0.83
LRCH3-219ENST00000494069 GCOM1H8Y6P7 765 aaPredicted RBP9.89□□□□□ -0.83
LRCH3-219ENST00000494069 EIF3JO75822 258 aaKnown RBP9.89□□□□□ -0.83
LRCH3-219ENST00000494069 MMP3P08254 477 aa9.89□□□□□ -0.83
LRCH3-219ENST00000494069 POLR2MP0CAP2 368 aa9.89□□□□□ -0.83
LRCH3-219ENST00000494069 MCM5P33992 734 aa9.89□□□□□ -0.83
LRCH3-219ENST00000494069 SMAD3P84022 425 aaKnown RBP9.89□□□□□ -0.83
LRCH3-219ENST00000494069 SP2Q02086 613 aa9.89□□□□□ -0.83
LRCH3-219ENST00000494069 PPIGQ13427 754 aaKnown RBP eCLIP9.89□□□□□ -0.832e-7■□□□□ 9.8
LRCH3-219ENST00000494069 PGM5Q15124 567 aa9.89□□□□□ -0.83
LRCH3-219ENST00000494069 FAM47CQ5HY64 1035 aa9.89□□□□□ -0.83
LRCH3-219ENST00000494069 NFXL1Q6ZNB6 911 aa9.89□□□□□ -0.83
LRCH3-219ENST00000494069 VSIG10LQ86VR7 867 aa9.89□□□□□ -0.83
LRCH3-219ENST00000494069 TMEM199Q8N511 208 aa9.89□□□□□ -0.83
LRCH3-219ENST00000494069 KAT2BQ92831 832 aa9.89□□□□□ -0.83
LRCH3-219ENST00000494069 SCLYQ96I15 445 aa9.89□□□□□ -0.83
LRCH3-219ENST00000494069 MAF1Q9H063 256 aa9.89□□□□□ -0.83
LRCH3-219ENST00000494069 SEMA6BQ9H3T3 888 aa9.89□□□□□ -0.83
LRCH3-219ENST00000494069 BCAS3Q9H6U6 928 aa9.89□□□□□ -0.83
LRCH3-219ENST00000494069 CXXC1Q9P0U4 656 aaPredicted RBP9.89□□□□□ -0.83
LRCH3-219ENST00000494069 CCDC69A6NI79 296 aa9.88□□□□□ -0.83
LRCH3-219ENST00000494069 DDAH1O94760 285 aa9.88□□□□□ -0.83
LRCH3-219ENST00000494069 GH1P01241 217 aa9.88□□□□□ -0.83
LRCH3-219ENST00000494069 PBX2P40425 430 aa9.88□□□□□ -0.83
LRCH3-219ENST00000494069 ADCK5Q3MIX3 580 aa9.88□□□□□ -0.83
LRCH3-219ENST00000494069 BRDTQ58F21 947 aaPredicted RBP9.88□□□□□ -0.83
LRCH3-219ENST00000494069 ZNF697Q5TEC3 545 aa9.88□□□□□ -0.83
LRCH3-219ENST00000494069 RASIP1Q5U651 963 aa9.88□□□□□ -0.83
LRCH3-219ENST00000494069 CCDC82Q8N4S0 544 aa9.88□□□□□ -0.83
LRCH3-219ENST00000494069 CTCFLQ8NI51 663 aaPredicted RBP9.88□□□□□ -0.83
LRCH3-219ENST00000494069 TMEM87BQ96K49 555 aa9.88□□□□□ -0.83
LRCH3-219ENST00000494069 CTAGE1Q96RT6 745 aa9.88□□□□□ -0.83
LRCH3-219ENST00000494069 MAP3K14Q99558 947 aa9.88□□□□□ -0.83
LRCH3-219ENST00000494069 CDX2Q99626 313 aaPredicted RBP9.88□□□□□ -0.83
LRCH3-219ENST00000494069 SPZ1Q9BXG8 430 aa9.88□□□□□ -0.83
LRCH3-219ENST00000494069 IL23AQ9NPF7 189 aa9.88□□□□□ -0.83
LRCH3-219ENST00000494069 STXBP5LQ9Y2K9 1186 aa9.88□□□□□ -0.83
LRCH3-219ENST00000494069 TELO2Q9Y4R8 837 aa9.88□□□□□ -0.83
LRCH3-219ENST00000494069 MRVI1Q9Y6F6 885 aa9.88□□□□□ -0.83
LRCH3-219ENST00000494069 SCN10AQ9Y5Y9 1956 aa9.87□□□□□ -0.83
LRCH3-219ENST00000494069 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.87□□□□□ -0.83
LRCH3-219ENST00000494069 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.87□□□□□ -0.83
LRCH3-219ENST00000494069 KPNA6O60684 536 aa9.87□□□□□ -0.83
LRCH3-219ENST00000494069 CDC45O75419 566 aa9.87□□□□□ -0.83
LRCH3-219ENST00000494069 CPA1P15085 419 aa9.87□□□□□ -0.83
LRCH3-219ENST00000494069 LIFRP42702 1097 aa9.87□□□□□ -0.83
LRCH3-219ENST00000494069 MRPS9P82933 396 aaKnown RBP9.87□□□□□ -0.83
LRCH3-219ENST00000494069 HSDL1Q3SXM5 330 aa9.87□□□□□ -0.83
LRCH3-219ENST00000494069 GDF6Q6KF10 455 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms