RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 C7P10643 843 aa9.45□□□□□ -0.9
HDAC6-234ENST00000493923 CSF2RAP15509 400 aa9.45□□□□□ -0.9
HDAC6-234ENST00000493923 EDNRBP24530 442 aa9.45□□□□□ -0.9
HDAC6-234ENST00000493923 CHMLP26374 656 aa9.45□□□□□ -0.9
HDAC6-234ENST00000493923 FPGSQ05932 587 aa9.45□□□□□ -0.9
HDAC6-234ENST00000493923 SEC23AQ15436 765 aa9.45□□□□□ -0.9
HDAC6-234ENST00000493923 QRICH1Q2TAL8 776 aa9.45□□□□□ -0.9
HDAC6-234ENST00000493923 TMEM240Q5SV17 173 aa9.45□□□□□ -0.9
HDAC6-234ENST00000493923 IQSEC1Q6DN90 963 aa9.45□□□□□ -0.9
HDAC6-234ENST00000493923 STOX1Q6ZVD7 989 aa9.45□□□□□ -0.9
HDAC6-234ENST00000493923 DGKHQ86XP1 1220 aa9.45□□□□□ -0.9
HDAC6-234ENST00000493923 ADGRF4Q8IZF3 695 aa9.45□□□□□ -0.9
HDAC6-234ENST00000493923 PCSK9Q8NBP7 692 aaKnown RBP9.45□□□□□ -0.9
HDAC6-234ENST00000493923 SLC39A7Q92504 469 aa9.45□□□□□ -0.9
HDAC6-234ENST00000493923 ESR2Q92731 530 aa9.45□□□□□ -0.9
HDAC6-234ENST00000493923 RNPC3Q96LT9 517 aaKnown RBP9.45□□□□□ -0.9
HDAC6-234ENST00000493923 GLT1D1Q96MS3 346 aa9.45□□□□□ -0.9
HDAC6-234ENST00000493923 ZSCAN10Q96SZ4 725 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-234ENST00000493923 CDX2Q99626 313 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-234ENST00000493923 SEMA6BQ9H3T3 888 aa9.45□□□□□ -0.9
HDAC6-234ENST00000493923 JMJD4Q9H9V9 463 aa9.45□□□□□ -0.9
HDAC6-234ENST00000493923 VTA1Q9NP79 307 aa9.45□□□□□ -0.9
HDAC6-234ENST00000493923 TNKSO95271 1327 aa9.45□□□□□ -0.9
HDAC6-234ENST00000493923 TRIP12Q14669 1992 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-234ENST00000493923 REV3LO60673 3130 aa9.44□□□□□ -0.9
HDAC6-234ENST00000493923 CHRM1P11229 460 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-234ENST00000493923 PBX2P40425 430 aa9.44□□□□□ -0.9
HDAC6-234ENST00000493923 ITGA7Q13683 1181 aa9.44□□□□□ -0.9
HDAC6-234ENST00000493923 CDC37Q16543 378 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-234ENST00000493923 DUSP28Q4G0W2 176 aa9.44□□□□□ -0.9
HDAC6-234ENST00000493923 MFSD5Q6N075 450 aa9.44□□□□□ -0.9
HDAC6-234ENST00000493923 RNF207Q6ZRF8 634 aa9.44□□□□□ -0.9
HDAC6-234ENST00000493923 SYTL5Q8TDW5 730 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-234ENST00000493923 MYLIPQ8WY64 445 aa9.44□□□□□ -0.9
HDAC6-234ENST00000493923 TAAR1Q96RJ0 339 aa9.44□□□□□ -0.9
HDAC6-234ENST00000493923 WDR11Q9BZH6 1224 aa9.44□□□□□ -0.9
HDAC6-234ENST00000493923 AP5M1Q9H0R1 490 aa9.44□□□□□ -0.9
HDAC6-234ENST00000493923 WNT8AQ9H1J5 351 aa9.44□□□□□ -0.9
HDAC6-234ENST00000493923 RNF41Q9H4P4 317 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-234ENST00000493923 SPC25Q9HBM1 224 aa9.44□□□□□ -0.9
HDAC6-234ENST00000493923 VAT1LQ9HCJ6 419 aa9.44□□□□□ -0.9
HDAC6-234ENST00000493923 GPHNQ9NQX3 736 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-234ENST00000493923 CXXC1Q9P0U4 656 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-234ENST00000493923 WDR19Q8NEZ3 1342 aa9.44□□□□□ -0.9
HDAC6-234ENST00000493923 MYH7BA7E2Y1 1941 aa9.44□□□□□ -0.9
HDAC6-234ENST00000493923 KIAA1217Q5T5P2 1943 aa9.44□□□□□ -0.9
HDAC6-234ENST00000493923 B4GALT4O60513 344 aa9.43□□□□□ -0.9
HDAC6-234ENST00000493923 MYL3P08590 195 aa9.43□□□□□ -0.9
HDAC6-234ENST00000493923 CYP21A2P08686 494 aa9.43□□□□□ -0.9
HDAC6-234ENST00000493923 PCP11498 1178 aaKnown RBP9.43□□□□□ -0.9
HDAC6-234ENST00000493923 DDIT3P35638 169 aa9.43□□□□□ -0.9
HDAC6-234ENST00000493923 MFAP1P55081 439 aaKnown RBP9.43□□□□□ -0.9
HDAC6-234ENST00000493923 CCL23P55773 120 aa9.43□□□□□ -0.9
HDAC6-234ENST00000493923 ANTXR2P58335 489 aa9.43□□□□□ -0.9
HDAC6-234ENST00000493923 SMAD3P84022 425 aaKnown RBP9.43□□□□□ -0.9
HDAC6-234ENST00000493923 RASIP1Q5U651 963 aa9.43□□□□□ -0.9
HDAC6-234ENST00000493923 ZNF365Q70YC5 407 aa9.43□□□□□ -0.9
HDAC6-234ENST00000493923 CHST3Q7LGC8 479 aa9.43□□□□□ -0.9
HDAC6-234ENST00000493923 SCLYQ96I15 445 aa9.43□□□□□ -0.9
HDAC6-234ENST00000493923 ZFP91Q96JP5 570 aaPredicted RBP9.43□□□□□ -0.9
HDAC6-234ENST00000493923 NOC4LQ9BVI4 516 aaKnown RBP9.43□□□□□ -0.9
HDAC6-234ENST00000493923 KAT14Q9H8E8 782 aa9.43□□□□□ -0.9
HDAC6-234ENST00000493923 TRMT13Q9NUP7 481 aaKnown RBP9.43□□□□□ -0.9
HDAC6-234ENST00000493923 MAD2L2Q9UI95 211 aa9.43□□□□□ -0.9
HDAC6-234ENST00000493923 HIP1O00291 1037 aa9.42□□□□□ -0.9
HDAC6-234ENST00000493923 CYP2C9P11712 490 aa9.42□□□□□ -0.9
HDAC6-234ENST00000493923 PURAQ00577 322 aaKnown RBP9.42□□□□□ -0.9
HDAC6-234ENST00000493923 PDE4DQ08499 809 aa9.42□□□□□ -0.9
HDAC6-234ENST00000493923 GRIN2CQ14957 1233 aa9.42□□□□□ -0.9
HDAC6-234ENST00000493923 IMMTQ16891 758 aaKnown RBP9.42□□□□□ -0.9
HDAC6-234ENST00000493923 GPATCH4Q5T3I0 446 aaKnown RBP9.42□□□□□ -0.9
HDAC6-234ENST00000493923 ZNF697Q5TEC3 545 aa9.42□□□□□ -0.9
HDAC6-234ENST00000493923 CCDC62Q6P9F0 684 aa9.42□□□□□ -0.9
HDAC6-234ENST00000493923 OR6J1Q8NGC5 347 aa9.42□□□□□ -0.9
HDAC6-234ENST00000493923 IL31RAQ8NI17 732 aa9.42□□□□□ -0.9
HDAC6-234ENST00000493923 CTAGE1Q96RT6 745 aa9.42□□□□□ -0.9
HDAC6-234ENST00000493923 C22orf23Q9BZE7 217 aa9.42□□□□□ -0.9
HDAC6-234ENST00000493923 ADD3Q9UEY8 706 aaKnown RBP9.42□□□□□ -0.9
HDAC6-234ENST00000493923 METRNQ9UJH8 293 aa9.42□□□□□ -0.9
HDAC6-234ENST00000493923 Q9Y3F1 56 aa9.42□□□□□ -0.9
HDAC6-234ENST00000493923 TRANK1O15050 2925 aa9.42□□□□□ -0.9
HDAC6-234ENST00000493923 NCOR1O75376 2440 aa9.41□□□□□ -0.9
HDAC6-234ENST00000493923 DOCK5Q9H7D0 1870 aa9.41□□□□□ -0.9
HDAC6-234ENST00000493923 PALM3A6NDB9 673 aaPredicted RBP9.41□□□□□ -0.9
HDAC6-234ENST00000493923 E7EWF7 191 aa9.41□□□□□ -0.9
HDAC6-234ENST00000493923 DLL1O00548 723 aa9.41□□□□□ -0.9
HDAC6-234ENST00000493923 SGSM2O43147 1006 aa9.41□□□□□ -0.9
HDAC6-234ENST00000493923 MAP3K13O43283 966 aa9.41□□□□□ -0.9
HDAC6-234ENST00000493923 CYTH3O43739 400 aa9.41□□□□□ -0.9
HDAC6-234ENST00000493923 SORBS3O60504 671 aa9.41□□□□□ -0.9
HDAC6-234ENST00000493923 RGS20O76081 388 aa9.41□□□□□ -0.9
HDAC6-234ENST00000493923 PARP1P09874 1014 aaKnown RBP9.41□□□□□ -0.9
HDAC6-234ENST00000493923 EIF2AK2P19525 551 aaKnown RBP9.41□□□□□ -0.9
HDAC6-234ENST00000493923 DNAJB2P25686 324 aa9.41□□□□□ -0.9
HDAC6-234ENST00000493923 ARHGAP1Q07960 439 aa9.41□□□□□ -0.9
HDAC6-234ENST00000493923 PPIGQ13427 754 aaKnown RBP eCLIP9.41□□□□□ -0.99e-16■■■□□ 17.9
HDAC6-234ENST00000493923 SYCP1Q15431 976 aa9.41□□□□□ -0.9
HDAC6-234ENST00000493923 LY6KQ17RY6 165 aa9.41□□□□□ -0.9
HDAC6-234ENST00000493923 NBPF20Q3BBV1 942 aa9.41□□□□□ -0.9
HDAC6-234ENST00000493923 ASPRV1Q53RT3 343 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms