RNA–Protein interactions for RNA: ENST00000493486.1

LCOR-208, Transcript of ligand dependent nuclear receptor corepressor, human

TSL 3

Gene LCOR, Length 245 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LCOR-208	ENST00000493486	CAVIN4	Q5BKX8	364 aa		4.28	□□□□□ -1.72
LCOR-208	ENST00000493486	TTC39B	Q5VTQ0	682 aa	Predicted RBP	4.28	□□□□□ -1.72
LCOR-208	ENST00000493486	OGFOD2	Q6N063	350 aa		4.28	□□□□□ -1.72
LCOR-208	ENST00000493486	VPS37D	Q86XT2	251 aa		4.28	□□□□□ -1.72
LCOR-208	ENST00000493486	ITPRIP	Q8IWB1	547 aa		4.28	□□□□□ -1.72
LCOR-208	ENST00000493486	FAM43A	Q8N2R8	423 aa		4.28	□□□□□ -1.72
LCOR-208	ENST00000493486	FBXL6	Q8N531	539 aa		4.28	□□□□□ -1.72
LCOR-208	ENST00000493486	KLHL23	Q8NBE8	558 aa		4.28	□□□□□ -1.72
LCOR-208	ENST00000493486	FAM200A	Q8TCP9	573 aa		4.28	□□□□□ -1.72
LCOR-208	ENST00000493486	TEKT1	Q969V4	418 aa		4.28	□□□□□ -1.72
LCOR-208	ENST00000493486	NSUN4	Q96CB9	384 aa	Known RBP	4.28	□□□□□ -1.72
LCOR-208	ENST00000493486	OPTN	Q96CV9	577 aa		4.28	□□□□□ -1.72
LCOR-208	ENST00000493486	MRI	Q9BWK5	157 aa		4.28	□□□□□ -1.72
LCOR-208	ENST00000493486	PBX4	Q9BYU1	374 aa		4.28	□□□□□ -1.72
LCOR-208	ENST00000493486	CCDC8	Q9H0W5	538 aa	Predicted RBP	4.28	□□□□□ -1.72
LCOR-208	ENST00000493486	ANTXR1	Q9H6X2	564 aa		4.28	□□□□□ -1.72
LCOR-208	ENST00000493486	ZBTB40	Q9NUA8	1239 aa		4.28	□□□□□ -1.72
LCOR-208	ENST00000493486	SAGE1	Q9NXZ1	904 aa		4.28	□□□□□ -1.72
LCOR-208	ENST00000493486	EXOC6B	Q9Y2D4	811 aa		4.28	□□□□□ -1.72
LCOR-208	ENST00000493486	NOP58	Q9Y2X3	529 aa	Known RBP	4.28	□□□□□ -1.72
LCOR-208	ENST00000493486	PPP2R3B	Q9Y5P8	575 aa		4.28	□□□□□ -1.72
LCOR-208	ENST00000493486	FPGT-TNNI3K	V9GXZ4	949 aa		4.28	□□□□□ -1.72
LCOR-208	ENST00000493486	PDE4DIP	Q5VU43	2346 aa		4.28	□□□□□ -1.72
LCOR-208	ENST00000493486	RPAP1	Q9BWH6	1393 aa	Predicted RBP	4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	PDS5A	Q29RF7	1337 aa	Known RBP	4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	ADGRA2	Q96PE1	1338 aa		4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	CEP290	O15078	2479 aa		4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	GPR75-ASB3	A0A0A6YYF3	556 aa		4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	IPO8	O15397	1037 aa	Known RBP	4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	PRMT3	O60678	531 aa		4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	SURF6	O75683	361 aa	Known RBP	4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	BTD	P43251	543 aa		4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	ZAP70	P43403	619 aa		4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	RGS3	P49796	1198 aa		4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	MMP14	P50281	582 aa		4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	DYNLL1	P63167	89 aa	Known RBP	4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	CRHR2	Q13324	411 aa		4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	FKBP1C	Q5VVH2	108 aa		4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	CAPN12	Q6ZSI9	719 aa		4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	FAM83A	Q86UY5	434 aa		4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	NCAPG2	Q86XI2	1143 aa		4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	SHISA5	Q8N114	240 aa		4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	SPATA5	Q8NB90	893 aa		4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	WDR66	Q8TBY9	1149 aa		4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	TBC1D22A	Q8WUA7	517 aa		4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	PIK3R5	Q8WYR1	880 aa		4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	EDC3	Q96F86	508 aa	Known RBP	4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	NEUROD6	Q96NK8	337 aa		4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	POP1	Q99575	1024 aa	Known RBP	4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	IDI2	Q9BXS1	227 aa		4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	ARHGAP39	Q9C0H5	1083 aa		4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	DNAJC18	Q9H819	358 aa		4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	IL1RAPL2	Q9NP60	686 aa		4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	USP40	Q9NVE5	1235 aa		4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	ABCF2	Q9UG63	623 aa		4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	ZNF112	Q9UJU3	913 aa		4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	SUGT1	Q9Y2Z0	365 aa		4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	LOC285556	D6RIA3	1793 aa		4.27	□□□□□ -1.73
LCOR-208	ENST00000493486	MGAM	O43451	1857 aa		4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	MROH7-TTC4	A0A0A0MT08	1334 aa		4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	DOCK3	Q8IZD9	2030 aa		4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	PLXNB2	O15031	1838 aa		4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	TNFRSF10B	O14763	440 aa		4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	CA12	O43570	354 aa		4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	MYO1B	O43795	1136 aa		4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	GAS2	O43903	313 aa	Known RBP	4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	SMARCA5	O60264	1052 aa	Predicted RBP	4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	PEX10	O60683	326 aa		4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	FRAT2	O75474	233 aa	Predicted RBP	4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	LDHB	P07195	334 aa	Known RBP	4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	ZBTB48	P10074	688 aa	Predicted RBP	4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	ACPP	P15309	386 aa		4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	PTPRA	P18433	802 aa		4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	BRD2	P25440	801 aa	Known RBP	4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	MAP4	P27816	1152 aa	Known RBP	4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	MVP	Q14764	893 aa	Known RBP	4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	NAA30	Q147X3	362 aa	Predicted RBP	4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	SUPT20HL1	Q3ZLR7	823 aa		4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	SGO2	Q562F6	1265 aa		4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	ANKRD34A	Q69YU3	496 aa		4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	C16orf46	Q6P387	395 aa		4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	FDX2	Q6P4F2	183 aa		4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	ARMC9	Q7Z3E5	817 aa		4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	ANKRD13A	Q8IZ07	590 aa		4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	CEP120	Q8N960	986 aa		4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	GPR152	Q8TDT2	470 aa		4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	FAM151A	Q8WW52	585 aa		4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	SLC7A3	Q8WY07	619 aa		4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	WRNIP1	Q96S55	665 aa		4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	MKNK1	Q9BUB5	465 aa		4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	RUSC1	Q9BVN2	902 aa		4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	ZMYND15	Q9H091	742 aa		4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	RNF208	Q9H0X6	261 aa		4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	GPR108	Q9NPR9	543 aa		4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	KANSL3	Q9P2N6	904 aa		4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	RCAN3	Q9UKA8	241 aa		4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	DENND2A	Q9ULE3	1009 aa		4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	RBBP6	Q7Z6E9	1792 aa	Known RBP	4.26	□□□□□ -1.73
LCOR-208	ENST00000493486	MYH1	P12882	1939 aa		4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms