RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 NKX2-4Q9H2Z4 354 aa5.77□□□□□ -1.49
VTA1-204ENST00000491881 ARHGEF4Q9NR80 690 aa5.77□□□□□ -1.49
VTA1-204ENST00000491881 CNOT11Q9UKZ1 510 aaKnown RBP5.77□□□□□ -1.49
VTA1-204ENST00000491881 BACE2Q9Y5Z0 518 aa5.77□□□□□ -1.49
VTA1-204ENST00000491881 IRS2Q9Y4H2 1338 aa5.76□□□□□ -1.49
VTA1-204ENST00000491881 AURKAO14965 403 aa5.76□□□□□ -1.49
VTA1-204ENST00000491881 PRODHO43272 600 aa5.76□□□□□ -1.49
VTA1-204ENST00000491881 ADCY3O60266 1144 aa5.76□□□□□ -1.49
VTA1-204ENST00000491881 FAM153BP0C7A2 387 aa5.76□□□□□ -1.49
VTA1-204ENST00000491881 IFNGR1P15260 489 aa5.76□□□□□ -1.49
VTA1-204ENST00000491881 HOXC12P31275 282 aa5.76□□□□□ -1.49
VTA1-204ENST00000491881 GRIA2P42262 883 aa5.76□□□□□ -1.49
VTA1-204ENST00000491881 SCRN1Q12765 414 aa5.76□□□□□ -1.49
VTA1-204ENST00000491881 TARBP2Q15633 366 aaKnown RBP5.76□□□□□ -1.49
VTA1-204ENST00000491881 ZNF827Q17R98 1081 aa5.76□□□□□ -1.49
VTA1-204ENST00000491881 ZC3H12BQ5HYM0 836 aaKnown RBP5.76□□□□□ -1.49
VTA1-204ENST00000491881 NT5DC1Q5TFE4 455 aa5.76□□□□□ -1.49
VTA1-204ENST00000491881 EEF1DP3Q658K8 133 aa5.76□□□□□ -1.49
VTA1-204ENST00000491881 RNPC3Q96LT9 517 aaKnown RBP5.76□□□□□ -1.49
VTA1-204ENST00000491881 FCRL3Q96P31 734 aaPredicted RBP5.76□□□□□ -1.49
VTA1-204ENST00000491881 JMJD8Q96S16 334 aa5.76□□□□□ -1.49
VTA1-204ENST00000491881 CYP26B1Q9NR63 512 aa5.76□□□□□ -1.49
VTA1-204ENST00000491881 AP5S1Q9NUS5 200 aa5.76□□□□□ -1.49
VTA1-204ENST00000491881 TBX22Q9Y458 520 aa5.76□□□□□ -1.49
VTA1-204ENST00000491881 PTCH2Q9Y6C5 1203 aa5.76□□□□□ -1.49
VTA1-204ENST00000491881 C2orf71A6NGG8 1288 aa5.75□□□□□ -1.49
VTA1-204ENST00000491881 CPP00450 1065 aa5.75□□□□□ -1.49
VTA1-204ENST00000491881 MSL3P1P0C860 447 aa5.75□□□□□ -1.49
VTA1-204ENST00000491881 FGFR1P11362 822 aa5.75□□□□□ -1.49
VTA1-204ENST00000491881 PABPC1P11940 636 aaKnown RBP5.75□□□□□ -1.49
VTA1-204ENST00000491881 ECI1P42126 302 aa5.75□□□□□ -1.49
VTA1-204ENST00000491881 YOD1Q5VVQ6 348 aaPredicted RBP5.75□□□□□ -1.49
VTA1-204ENST00000491881 NSMFQ6X4W1 530 aa5.75□□□□□ -1.49
VTA1-204ENST00000491881 ADGRG2Q8IZP9 1017 aa5.75□□□□□ -1.49
VTA1-204ENST00000491881 KCTD13Q8WZ19 329 aa5.75□□□□□ -1.49
VTA1-204ENST00000491881 MCMBPQ9BTE3 642 aa5.75□□□□□ -1.49
VTA1-204ENST00000491881 TRBV23-1A0A0A0MS06 115 aa5.74□□□□□ -1.49
VTA1-204ENST00000491881 A0A1B0GTL3 188 aa5.74□□□□□ -1.49
VTA1-204ENST00000491881 A0A1W2PQJ5 194 aa5.74□□□□□ -1.49
VTA1-204ENST00000491881 CDC45O75419 566 aa5.74□□□□□ -1.49
VTA1-204ENST00000491881 GFRA1P56159 465 aa5.74□□□□□ -1.49
VTA1-204ENST00000491881 FOXO4P98177 505 aa5.74□□□□□ -1.49
VTA1-204ENST00000491881 VWA3BQ502W6 1294 aa5.74□□□□□ -1.49
VTA1-204ENST00000491881 RTP2Q5QGT7 225 aa5.74□□□□□ -1.49
VTA1-204ENST00000491881 SDE2Q6IQ49 451 aa5.74□□□□□ -1.49
VTA1-204ENST00000491881 RCSD1Q6JBY9 416 aa5.74□□□□□ -1.49
VTA1-204ENST00000491881 LIPIQ6XZB0 460 aa5.74□□□□□ -1.49
VTA1-204ENST00000491881 FERMT3Q86UX7 667 aa5.74□□□□□ -1.49
VTA1-204ENST00000491881 HOMER1Q86YM7 354 aa5.74□□□□□ -1.49
VTA1-204ENST00000491881 SCUBE1Q8IWY4 988 aa5.74□□□□□ -1.49
VTA1-204ENST00000491881 JMYQ8N9B5 988 aa5.74□□□□□ -1.49
VTA1-204ENST00000491881 TMEM145Q8NBT3 493 aa5.74□□□□□ -1.49
VTA1-204ENST00000491881 APPBP2Q92624 585 aa5.74□□□□□ -1.49
VTA1-204ENST00000491881 SPATA25Q9BR10 227 aa5.74□□□□□ -1.49
VTA1-204ENST00000491881 FANCLQ9NW38 375 aa5.74□□□□□ -1.49
VTA1-204ENST00000491881 FAN1Q9Y2M0 1017 aa5.74□□□□□ -1.49
VTA1-204ENST00000491881 TRBV23OR9-2A0A075B6M9 112 aa5.73□□□□□ -1.49
VTA1-204ENST00000491881 ESYT3A0FGR9 886 aa5.73□□□□□ -1.49
VTA1-204ENST00000491881 TBC1D8O95759 1140 aa5.73□□□□□ -1.49
VTA1-204ENST00000491881 SCG5P05408 212 aa5.73□□□□□ -1.49
VTA1-204ENST00000491881 THBDP07204 575 aa5.73□□□□□ -1.49
VTA1-204ENST00000491881 L1CAMP32004 1257 aa5.73□□□□□ -1.49
VTA1-204ENST00000491881 CEBPAP49715 358 aaPredicted RBP5.73□□□□□ -1.49
VTA1-204ENST00000491881 SUMO1P63165 101 aaKnown RBP5.73□□□□□ -1.49
VTA1-204ENST00000491881 MVKQ03426 396 aa5.73□□□□□ -1.49
VTA1-204ENST00000491881 MAP4K2Q12851 820 aa5.73□□□□□ -1.49
VTA1-204ENST00000491881 SQSTM1Q13501 440 aa5.73□□□□□ -1.49
VTA1-204ENST00000491881 SF1Q15637 639 aaKnown RBP5.73□□□□□ -1.49
VTA1-204ENST00000491881 FAM209AQ5JX71 171 aa5.73□□□□□ -1.49
VTA1-204ENST00000491881 PAQR3Q6TCH7 311 aa5.73□□□□□ -1.49
VTA1-204ENST00000491881 CYP2R1Q6VVX0 501 aa5.73□□□□□ -1.49
VTA1-204ENST00000491881 JAMLQ86YT9 394 aa5.73□□□□□ -1.49
VTA1-204ENST00000491881 TMEM52Q8NDY8 209 aa5.73□□□□□ -1.49
VTA1-204ENST00000491881 FNIP1Q8TF40 1166 aa5.73□□□□□ -1.49
VTA1-204ENST00000491881 COPS5Q92905 334 aa5.73□□□□□ -1.49
VTA1-204ENST00000491881 PTCHD1Q96NR3 888 aa5.73□□□□□ -1.49
VTA1-204ENST00000491881 DHRS4Q9BTZ2 278 aa5.73□□□□□ -1.49
VTA1-204ENST00000491881 KANSL2Q9H9L4 492 aa5.73□□□□□ -1.49
VTA1-204ENST00000491881 GPRC5CQ9NQ84 441 aa5.73□□□□□ -1.49
VTA1-204ENST00000491881 TMEM260Q9NX78 707 aa5.73□□□□□ -1.49
VTA1-204ENST00000491881 PMF1-BGLAPU3KQ54 211 aa5.73□□□□□ -1.49
VTA1-204ENST00000491881 CCDC163A0A0D9SF12 145 aa5.72□□□□□ -1.49
VTA1-204ENST00000491881 NPHP3-ACAD11A0A0J9YXS1 232 aa5.72□□□□□ -1.49
VTA1-204ENST00000491881 FGF10O15520 208 aaPredicted RBP5.72□□□□□ -1.49
VTA1-204ENST00000491881 DLX3O60479 287 aa5.72□□□□□ -1.49
VTA1-204ENST00000491881 PLA2G1BP04054 148 aaKnown RBP5.72□□□□□ -1.49
VTA1-204ENST00000491881 CYBBP04839 570 aa5.72□□□□□ -1.49
VTA1-204ENST00000491881 DBHP09172 617 aa5.72□□□□□ -1.49
VTA1-204ENST00000491881 PAMP19021 973 aa5.72□□□□□ -1.49
VTA1-204ENST00000491881 MAGEA10P43363 369 aaPredicted RBP5.72□□□□□ -1.49
VTA1-204ENST00000491881 PRSS53Q2L4Q9 553 aa5.72□□□□□ -1.49
VTA1-204ENST00000491881 FOXB2Q5VYV0 432 aa5.72□□□□□ -1.49
VTA1-204ENST00000491881 HLA-DQA1Q5Y7H0 255 aa5.72□□□□□ -1.49
VTA1-204ENST00000491881 PPIL6Q8IXY8 311 aa5.72□□□□□ -1.49
VTA1-204ENST00000491881 OSBP2Q969R2 916 aa5.72□□□□□ -1.49
VTA1-204ENST00000491881 EXOC2Q96KP1 924 aa5.72□□□□□ -1.49
VTA1-204ENST00000491881 CLEC1BQ9P126 229 aa5.72□□□□□ -1.49
VTA1-204ENST00000491881 MRPS23Q9Y3D9 190 aaKnown RBP5.72□□□□□ -1.49
VTA1-204ENST00000491881 ENPP3O14638 875 aa5.71□□□□□ -1.5
VTA1-204ENST00000491881 MEFVO15553 781 aaPredicted RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms