RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 KAT2BQ92831 832 aa24.18■■□□□ 1.46
CLIP2-208ENST00000491075 IWS1Q96ST2 819 aa24.18■■□□□ 1.46
CLIP2-208ENST00000491075 LRFN3Q9BTN0 628 aa24.18■■□□□ 1.46
CLIP2-208ENST00000491075 EPHX3Q9H6B9 360 aa24.18■■□□□ 1.46
CLIP2-208ENST00000491075 GTF2IRD1Q9UHL9 959 aa24.18■■□□□ 1.46
CLIP2-208ENST00000491075 MYH7BA7E2Y1 1941 aa24.18■■□□□ 1.46
CLIP2-208ENST00000491075 CCDC171Q6TFL3 1326 aa24.17■■□□□ 1.46
CLIP2-208ENST00000491075 EFCAB14O75071 495 aa24.17■■□□□ 1.46
CLIP2-208ENST00000491075 GOLGA8HP0CJ92 632 aa24.17■■□□□ 1.46
CLIP2-208ENST00000491075 DEFB103AP81534 67 aa24.17■■□□□ 1.46
CLIP2-208ENST00000491075 STXBP2Q15833 593 aa24.17■■□□□ 1.46
CLIP2-208ENST00000491075 CDC37Q16543 378 aaPredicted RBP24.17■■□□□ 1.46
CLIP2-208ENST00000491075 DGKDQ16760 1214 aa24.17■■□□□ 1.46
CLIP2-208ENST00000491075 ANKRD45Q5TZF3 282 aa24.17■■□□□ 1.46
CLIP2-208ENST00000491075 TBC1D10CQ8IV04 446 aa24.17■■□□□ 1.46
CLIP2-208ENST00000491075 GDPD5Q8WTR4 605 aa24.17■■□□□ 1.46
CLIP2-208ENST00000491075 ESR2Q92731 530 aa24.17■■□□□ 1.46
CLIP2-208ENST00000491075 KATNAL1Q9BW62 490 aa24.17■■□□□ 1.46
CLIP2-208ENST00000491075 ABHD14A-ACY1A0A1B0GW23 586 aa24.16■■□□□ 1.46
CLIP2-208ENST00000491075 CKBP12277 381 aa24.16■■□□□ 1.46
CLIP2-208ENST00000491075 NT5C2P49902 561 aa24.16■■□□□ 1.46
CLIP2-208ENST00000491075 TMEM31Q5JXX7 168 aa24.16■■□□□ 1.46
CLIP2-208ENST00000491075 CHST3Q7LGC8 479 aa24.16■■□□□ 1.46
CLIP2-208ENST00000491075 DGKHQ86XP1 1220 aa24.16■■□□□ 1.46
CLIP2-208ENST00000491075 MCF2L2Q86YR7 1114 aa24.16■■□□□ 1.46
CLIP2-208ENST00000491075 C7orf31Q8N865 590 aa24.16■■□□□ 1.46
CLIP2-208ENST00000491075 SYTL5Q8TDW5 730 aaPredicted RBP24.16■■□□□ 1.46
CLIP2-208ENST00000491075 EMID1Q96A84 441 aaPredicted RBP24.16■■□□□ 1.46
CLIP2-208ENST00000491075 TAAR1Q96RJ0 339 aa24.16■■□□□ 1.46
CLIP2-208ENST00000491075 RAD9AQ99638 391 aa24.16■■□□□ 1.46
CLIP2-208ENST00000491075 UBA5Q9GZZ9 404 aa24.16■■□□□ 1.46
CLIP2-208ENST00000491075 CPVLQ9H3G5 476 aa24.16■■□□□ 1.46
CLIP2-208ENST00000491075 NBNO60934 754 aa24.15■■□□□ 1.46
CLIP2-208ENST00000491075 GJB5O95377 273 aa24.15■■□□□ 1.46
CLIP2-208ENST00000491075 NMIQ13287 307 aaPredicted RBP24.15■■□□□ 1.46
CLIP2-208ENST00000491075 TMCO2Q7Z6W1 182 aaPredicted RBP24.15■■□□□ 1.46
CLIP2-208ENST00000491075 RMDN3Q96TC7 470 aa24.15■■□□□ 1.46
CLIP2-208ENST00000491075 COL20A1Q9P218 1284 aa24.15■■□□□ 1.46
CLIP2-208ENST00000491075 NEDD4P46934 1319 aa24.14■■□□□ 1.46
CLIP2-208ENST00000491075 MFAP1P55081 439 aaKnown RBP24.14■■□□□ 1.45
CLIP2-208ENST00000491075 ERVK-21P61565 698 aa24.14■■□□□ 1.45
CLIP2-208ENST00000491075 CCDC178Q5BJE1 867 aa24.14■■□□□ 1.45
CLIP2-208ENST00000491075 PNMA1Q8ND90 353 aa24.14■■□□□ 1.45
CLIP2-208ENST00000491075 TBC1D5Q92609 795 aa24.14■■□□□ 1.45
CLIP2-208ENST00000491075 TGS1Q96RS0 853 aaKnown RBP24.14■■□□□ 1.45
CLIP2-208ENST00000491075 ZKSCAN3Q9BRR0 538 aa24.14■■□□□ 1.45
CLIP2-208ENST00000491075 HDAC6Q9UBN7 1215 aa24.14■■□□□ 1.45
CLIP2-208ENST00000491075 MICAL3Q7RTP6 2002 aa24.13■■□□□ 1.45
CLIP2-208ENST00000491075 F2P00734 622 aa24.13■■□□□ 1.45
CLIP2-208ENST00000491075 HOXD11P31277 338 aaPredicted RBP24.13■■□□□ 1.45
CLIP2-208ENST00000491075 PSEN2P49810 448 aa24.13■■□□□ 1.45
CLIP2-208ENST00000491075 PTK7Q13308 1070 aa24.13■■□□□ 1.45
CLIP2-208ENST00000491075 IKBKEQ14164 716 aa24.13■■□□□ 1.45
CLIP2-208ENST00000491075 ASPRV1Q53RT3 343 aa24.13■■□□□ 1.45
CLIP2-208ENST00000491075 IQCA1Q86XH1 822 aa24.13■■□□□ 1.45
CLIP2-208ENST00000491075 ADGRF4Q8IZF3 695 aa24.13■■□□□ 1.45
CLIP2-208ENST00000491075 SUGCTQ9HAC7 445 aa24.13■■□□□ 1.45
CLIP2-208ENST00000491075 DDX41Q9UJV9 622 aaKnown RBP24.13■■□□□ 1.45
CLIP2-208ENST00000491075 MRPL11Q9Y3B7 192 aaKnown RBP24.13■■□□□ 1.45
CLIP2-208ENST00000491075 EIF3JO75822 258 aaKnown RBP24.12■■□□□ 1.45
CLIP2-208ENST00000491075 LAMC2Q13753 1193 aa24.12■■□□□ 1.45
CLIP2-208ENST00000491075 MFSD10Q14728 455 aa24.12■■□□□ 1.45
CLIP2-208ENST00000491075 ARHGEF16Q5VV41 709 aa24.12■■□□□ 1.45
CLIP2-208ENST00000491075 PPTC7Q8NI37 304 aa24.12■■□□□ 1.45
CLIP2-208ENST00000491075 KAT14Q9H8E8 782 aa24.12■■□□□ 1.45
CLIP2-208ENST00000491075 MTUS1Q9ULD2 1270 aa24.12■■□□□ 1.45
CLIP2-208ENST00000491075 MRVI1Q9Y6F6 885 aa24.12■■□□□ 1.45
CLIP2-208ENST00000491075 LINC01553A4QN01 128 aa24.11■■□□□ 1.45
CLIP2-208ENST00000491075 HAS3O00219 553 aa24.11■■□□□ 1.45
CLIP2-208ENST00000491075 KIAA0753Q2KHM9 967 aa24.11■■□□□ 1.45
CLIP2-208ENST00000491075 TCTN1Q2MV58 587 aa24.11■■□□□ 1.45
CLIP2-208ENST00000491075 QRICH1Q2TAL8 776 aa24.11■■□□□ 1.45
CLIP2-208ENST00000491075 FBXO11Q86XK2 927 aa24.11■■□□□ 1.45
CLIP2-208ENST00000491075 CRBNQ96SW2 442 aa24.11■■□□□ 1.45
CLIP2-208ENST00000491075 ALG1Q9BT22 464 aa24.11■■□□□ 1.45
CLIP2-208ENST00000491075 TRIM6-TRIM34B2RNG4 842 aa24.1■■□□□ 1.45
CLIP2-208ENST00000491075 ZNF213O14771 459 aa24.1■■□□□ 1.45
CLIP2-208ENST00000491075 GPR37L1O60883 481 aa24.1■■□□□ 1.45
CLIP2-208ENST00000491075 ZNF286BP0CG31 522 aa24.1■■□□□ 1.45
CLIP2-208ENST00000491075 EIF2AK2P19525 551 aaKnown RBP24.1■■□□□ 1.45
CLIP2-208ENST00000491075 TRIM71Q2Q1W2 868 aaKnown RBP24.1■■□□□ 1.45
CLIP2-208ENST00000491075 KHSRPQ92945 711 aaKnown RBP eCLIP24.1■■□□□ 1.45
CLIP2-208ENST00000491075 UBE2ZQ9H832 354 aaPredicted RBP24.1■■□□□ 1.45
CLIP2-208ENST00000491075 PXMP2Q9NR77 195 aa24.1■■□□□ 1.45
CLIP2-208ENST00000491075 EMSYQ7Z589 1322 aa24.1■■□□□ 1.45
CLIP2-208ENST00000491075 DHX16O60231 1041 aaKnown RBP24.09■■□□□ 1.45
CLIP2-208ENST00000491075 NR3C2P08235 984 aa24.09■■□□□ 1.45
CLIP2-208ENST00000491075 ZNF618Q5T7W0 954 aa24.09■■□□□ 1.45
CLIP2-208ENST00000491075 TRAF7Q6Q0C0 670 aa24.09■■□□□ 1.45
CLIP2-208ENST00000491075 DHX37Q8IY37 1157 aaKnown RBP24.09■■□□□ 1.45
CLIP2-208ENST00000491075 ANKS1AQ92625 1134 aa24.09■■□□□ 1.45
CLIP2-208ENST00000491075 INSL6Q9Y581 213 aa24.09■■□□□ 1.45
CLIP2-208ENST00000491075 KDM4AO75164 1064 aa24.08■■□□□ 1.45
CLIP2-208ENST00000491075 LGR5O75473 907 aa24.08■■□□□ 1.45
CLIP2-208ENST00000491075 HOXD8P13378 290 aaPredicted RBP24.08■■□□□ 1.45
CLIP2-208ENST00000491075 C11orf16Q9NQ32 467 aa24.08■■□□□ 1.45
CLIP2-208ENST00000491075 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.07■■□□□ 1.44
CLIP2-208ENST00000491075 PI4K2BG5E9Z4 385 aa24.07■■□□□ 1.44
CLIP2-208ENST00000491075 CFBP00751 764 aa24.07■■□□□ 1.44
CLIP2-208ENST00000491075 PARP1P09874 1014 aaKnown RBP24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms