RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 SPRED1Q7Z699 444 aa4.4□□□□□ -1.71
R3HDM1-219ENST00000488035 ZFPM1Q8IX07 1006 aa4.4□□□□□ -1.71
R3HDM1-219ENST00000488035 CCDC144CPQ8IYA2 1237 aa4.4□□□□□ -1.71
R3HDM1-219ENST00000488035 DEPDC7Q96QD5 511 aa4.4□□□□□ -1.71
R3HDM1-219ENST00000488035 HAUS7Q99871 368 aa4.4□□□□□ -1.71
R3HDM1-219ENST00000488035 SLC12A9Q9BXP2 914 aa4.4□□□□□ -1.71
R3HDM1-219ENST00000488035 WDR26Q9H7D7 661 aa4.4□□□□□ -1.71
R3HDM1-219ENST00000488035 PCDH18Q9HCL0 1135 aa4.4□□□□□ -1.71
R3HDM1-219ENST00000488035 SIRPGQ9P1W8 387 aa4.4□□□□□ -1.71
R3HDM1-219ENST00000488035 APEX2Q9UBZ4 518 aa4.4□□□□□ -1.71
R3HDM1-219ENST00000488035 NUDT5Q9UKK9 219 aa4.4□□□□□ -1.71
R3HDM1-219ENST00000488035 PLA2G2DQ9UNK4 145 aa4.4□□□□□ -1.71
R3HDM1-219ENST00000488035 ZNF451Q9Y4E5 1061 aa4.4□□□□□ -1.71
R3HDM1-219ENST00000488035 SLC12A7Q9Y666 1083 aa4.4□□□□□ -1.71
R3HDM1-219ENST00000488035 ZNF536O15090 1300 aa4.4□□□□□ -1.71
R3HDM1-219ENST00000488035 U2SURPO15042 1029 aaKnown RBP4.39□□□□□ -1.71
R3HDM1-219ENST00000488035 SUSD5O60279 629 aa4.39□□□□□ -1.71
R3HDM1-219ENST00000488035 PMLP29590 882 aa4.39□□□□□ -1.71
R3HDM1-219ENST00000488035 RBM10P98175 930 aaKnown RBP4.39□□□□□ -1.71
R3HDM1-219ENST00000488035 SPATC1Q76KD6 591 aa4.39□□□□□ -1.71
R3HDM1-219ENST00000488035 ZNF513Q8N8E2 541 aaPredicted RBP4.39□□□□□ -1.71
R3HDM1-219ENST00000488035 SMARCC2Q8TAQ2 1214 aa4.39□□□□□ -1.71
R3HDM1-219ENST00000488035 ZBTB8AQ96BR9 441 aa4.39□□□□□ -1.71
R3HDM1-219ENST00000488035 PEX11GQ96HA9 241 aa4.39□□□□□ -1.71
R3HDM1-219ENST00000488035 DHRS1Q96LJ7 313 aa4.39□□□□□ -1.71
R3HDM1-219ENST00000488035 FGD4Q96M96 766 aa4.39□□□□□ -1.71
R3HDM1-219ENST00000488035 SRPK1Q96SB4 655 aaKnown RBP4.39□□□□□ -1.71
R3HDM1-219ENST00000488035 KLHL25Q9H0H3 589 aa4.39□□□□□ -1.71
R3HDM1-219ENST00000488035 KANSL2Q9H9L4 492 aa4.39□□□□□ -1.71
R3HDM1-219ENST00000488035 SPATA6Q9NWH7 488 aaPredicted RBP4.39□□□□□ -1.71
R3HDM1-219ENST00000488035 FGF10O15520 208 aaPredicted RBP4.38□□□□□ -1.71
R3HDM1-219ENST00000488035 PDPK1O15530 556 aa4.38□□□□□ -1.71
R3HDM1-219ENST00000488035 DIAPH1O60610 1272 aaKnown RBP4.38□□□□□ -1.71
R3HDM1-219ENST00000488035 GLI4P10075 376 aa4.38□□□□□ -1.71
R3HDM1-219ENST00000488035 TACR1P25103 407 aa4.38□□□□□ -1.71
R3HDM1-219ENST00000488035 L1CAMP32004 1257 aa4.38□□□□□ -1.71
R3HDM1-219ENST00000488035 CACNB2Q08289 660 aaPredicted RBP4.38□□□□□ -1.71
R3HDM1-219ENST00000488035 NCAPHQ15003 741 aa4.38□□□□□ -1.71
R3HDM1-219ENST00000488035 SURF1Q15526 300 aa4.38□□□□□ -1.71
R3HDM1-219ENST00000488035 SLC10A6Q3KNW5 377 aa4.38□□□□□ -1.71
R3HDM1-219ENST00000488035 RGL3Q3MIN7 710 aa4.38□□□□□ -1.71
R3HDM1-219ENST00000488035 CRB2Q5IJ48 1285 aa4.38□□□□□ -1.71
R3HDM1-219ENST00000488035 FAM26FQ5R3K3 315 aa4.38□□□□□ -1.71
R3HDM1-219ENST00000488035 SOGA3Q5TF21 947 aa4.38□□□□□ -1.71
R3HDM1-219ENST00000488035 JAZF1Q86VZ6 243 aa4.38□□□□□ -1.71
R3HDM1-219ENST00000488035 LINC00482Q8N8I6 264 aa4.38□□□□□ -1.71
R3HDM1-219ENST00000488035 BRF1Q92994 677 aa4.38□□□□□ -1.71
R3HDM1-219ENST00000488035 GP6Q9HCN6 339 aa4.38□□□□□ -1.71
R3HDM1-219ENST00000488035 PFDN2Q9UHV9 154 aa4.38□□□□□ -1.71
R3HDM1-219ENST00000488035 ST6GALNAC2Q9UJ37 374 aa4.38□□□□□ -1.71
R3HDM1-219ENST00000488035 INVSQ9Y283 1065 aa4.38□□□□□ -1.71
R3HDM1-219ENST00000488035 TBX1O43435 398 aa4.37□□□□□ -1.71
R3HDM1-219ENST00000488035 ZBTB7AO95365 584 aa4.37□□□□□ -1.71
R3HDM1-219ENST00000488035 CD247P20963 164 aa4.37□□□□□ -1.71
R3HDM1-219ENST00000488035 ZNF445P59923 1031 aa4.37□□□□□ -1.71
R3HDM1-219ENST00000488035 RASGRF1Q13972 1273 aa4.37□□□□□ -1.71
R3HDM1-219ENST00000488035 HEATR6Q6AI08 1181 aaKnown RBP4.37□□□□□ -1.71
R3HDM1-219ENST00000488035 C7orf61Q8IZ16 206 aa4.37□□□□□ -1.71
R3HDM1-219ENST00000488035 LILRB2Q8N423 598 aa4.37□□□□□ -1.71
R3HDM1-219ENST00000488035 ADCY4Q8NFM4 1077 aa4.37□□□□□ -1.71
R3HDM1-219ENST00000488035 SMARCC1Q92922 1105 aaPredicted RBP4.37□□□□□ -1.71
R3HDM1-219ENST00000488035 MKL1Q969V6 931 aa4.37□□□□□ -1.71
R3HDM1-219ENST00000488035 PTCHD1Q96NR3 888 aa4.37□□□□□ -1.71
R3HDM1-219ENST00000488035 NOX5Q96PH1 765 aa4.37□□□□□ -1.71
R3HDM1-219ENST00000488035 DNAJC7Q99615 494 aa4.37□□□□□ -1.71
R3HDM1-219ENST00000488035 CCDC113Q9H0I3 377 aa4.37□□□□□ -1.71
R3HDM1-219ENST00000488035 VPS11Q9H270 941 aa4.37□□□□□ -1.71
R3HDM1-219ENST00000488035 ANKRD34BA5PLL1 514 aa4.36□□□□□ -1.71
R3HDM1-219ENST00000488035 MROH6A6NGR9 719 aa4.36□□□□□ -1.71
R3HDM1-219ENST00000488035 CYP2C8P10632 490 aa4.36□□□□□ -1.71
R3HDM1-219ENST00000488035 RPL13P26373 211 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-219ENST00000488035 ANKRD39Q53RE8 183 aa4.36□□□□□ -1.71
R3HDM1-219ENST00000488035 NOL9Q5SY16 702 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-219ENST00000488035 EEPD1Q7L9B9 569 aa4.36□□□□□ -1.71
R3HDM1-219ENST00000488035 NETO2Q8NC67 525 aa4.36□□□□□ -1.71
R3HDM1-219ENST00000488035 ZNF747Q9BV97 191 aa4.36□□□□□ -1.71
R3HDM1-219ENST00000488035 SSBP3Q9BWW4 388 aaPredicted RBP4.36□□□□□ -1.71
R3HDM1-219ENST00000488035 GRIA2P42262 883 aa4.35□□□□□ -1.71
R3HDM1-219ENST00000488035 SMAD4Q13485 552 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-219ENST00000488035 NFE2L2Q16236 605 aa4.35□□□□□ -1.71
R3HDM1-219ENST00000488035 MTERF2Q49AM1 385 aa4.35□□□□□ -1.71
R3HDM1-219ENST00000488035 ADAT2Q7Z6V5 191 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-219ENST00000488035 PLEKHH3Q7Z736 793 aa4.35□□□□□ -1.71
R3HDM1-219ENST00000488035 MRFAP1L1Q96HT8 127 aa4.35□□□□□ -1.71
R3HDM1-219ENST00000488035 KLC2Q9H0B6 622 aa4.35□□□□□ -1.71
R3HDM1-219ENST00000488035 PCED1AQ9H1Q7 454 aa4.35□□□□□ -1.71
R3HDM1-219ENST00000488035 NOL6Q9H6R4 1146 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-219ENST00000488035 SF3B6Q9Y3B4 125 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-219ENST00000488035 TBX22Q9Y458 520 aa4.35□□□□□ -1.71
R3HDM1-219ENST00000488035 MRPL42Q9Y6G3 142 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-219ENST00000488035 A0A1W2PQU0 124 aa4.34□□□□□ -1.71
R3HDM1-219ENST00000488035 H0Y8X5 98 aa4.34□□□□□ -1.71
R3HDM1-219ENST00000488035 LAMTOR5O43504 91 aa4.34□□□□□ -1.71
R3HDM1-219ENST00000488035 ADCY3O60266 1144 aa4.34□□□□□ -1.71
R3HDM1-219ENST00000488035 ITGAVP06756 1048 aa4.34□□□□□ -1.71
R3HDM1-219ENST00000488035 THBS2P35442 1172 aa4.34□□□□□ -1.71
R3HDM1-219ENST00000488035 PPP2R5DQ14738 602 aa4.34□□□□□ -1.71
R3HDM1-219ENST00000488035 CDSNQ15517 529 aa4.34□□□□□ -1.71
R3HDM1-219ENST00000488035 SV2CQ496J9 727 aa4.34□□□□□ -1.71
R3HDM1-219ENST00000488035 YOD1Q5VVQ6 348 aaPredicted RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms