RNA–Protein interactions for RNA: ENST00000486441.1

SDCCAG3-211, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 5

Gene SDCCAG3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-211ENST00000486441 USH1GQ495M9 461 aa16.75■□□□□ 0.27
SDCCAG3-211ENST00000486441 LMCD1Q9NZU5 365 aa16.75■□□□□ 0.27
SDCCAG3-211ENST00000486441 DDX41Q9UJV9 622 aaKnown RBP16.75■□□□□ 0.27
SDCCAG3-211ENST00000486441 RAD50Q92878 1312 aa16.74■□□□□ 0.27
SDCCAG3-211ENST00000486441 HAS3O00219 553 aa16.74■□□□□ 0.27
SDCCAG3-211ENST00000486441 GJB5O95377 273 aa16.74■□□□□ 0.27
SDCCAG3-211ENST00000486441 CKBP12277 381 aa16.74■□□□□ 0.27
SDCCAG3-211ENST00000486441 ERVK-21P61565 698 aa16.74■□□□□ 0.27
SDCCAG3-211ENST00000486441 SEPT14Q6ZU15 432 aa16.74■□□□□ 0.27
SDCCAG3-211ENST00000486441 LRRC8DQ7L1W4 858 aa16.74■□□□□ 0.27
SDCCAG3-211ENST00000486441 GDPD5Q8WTR4 605 aa16.74■□□□□ 0.27
SDCCAG3-211ENST00000486441 ANKS1AQ92625 1134 aa16.74■□□□□ 0.27
SDCCAG3-211ENST00000486441 ZKSCAN3Q9BRR0 538 aa16.74■□□□□ 0.27
SDCCAG3-211ENST00000486441 HDAC6Q9UBN7 1215 aa16.74■□□□□ 0.27
SDCCAG3-211ENST00000486441 GTF2IRD1Q9UHL9 959 aa16.74■□□□□ 0.27
SDCCAG3-211ENST00000486441 ARIH1Q9Y4X5 557 aaPredicted RBP16.74■□□□□ 0.27
SDCCAG3-211ENST00000486441 NEDD4P46934 1319 aa16.73■□□□□ 0.27
SDCCAG3-211ENST00000486441 LINC01553A4QN01 128 aa16.73■□□□□ 0.27
SDCCAG3-211ENST00000486441 OPLAHO14841 1288 aa16.73■□□□□ 0.27
SDCCAG3-211ENST00000486441 RGS20O76081 388 aa16.73■□□□□ 0.27
SDCCAG3-211ENST00000486441 GH1P01241 217 aa16.73■□□□□ 0.27
SDCCAG3-211ENST00000486441 HOXD8P13378 290 aaPredicted RBP16.73■□□□□ 0.27
SDCCAG3-211ENST00000486441 CHMP4BP1P59074 171 aa16.73■□□□□ 0.27
SDCCAG3-211ENST00000486441 ZNF200P98182 395 aaPredicted RBP16.73■□□□□ 0.27
SDCCAG3-211ENST00000486441 ANKRD45Q5TZF3 282 aa16.73■□□□□ 0.27
SDCCAG3-211ENST00000486441 CNKSR3Q6P9H4 555 aa16.73■□□□□ 0.27
SDCCAG3-211ENST00000486441 ADGRF4Q8IZF3 695 aa16.73■□□□□ 0.27
SDCCAG3-211ENST00000486441 EMID1Q96A84 441 aaPredicted RBP16.73■□□□□ 0.27
SDCCAG3-211ENST00000486441 MAF1Q9H063 256 aa16.73■□□□□ 0.27
SDCCAG3-211ENST00000486441 NOD1Q9Y239 953 aa16.73■□□□□ 0.27
SDCCAG3-211ENST00000486441 WDFY4Q6ZS81 3184 aa16.72■□□□□ 0.27
SDCCAG3-211ENST00000486441 GPR37L1O60883 481 aa16.72■□□□□ 0.27
SDCCAG3-211ENST00000486441 CDC37Q16543 378 aaPredicted RBP16.72■□□□□ 0.27
SDCCAG3-211ENST00000486441 GPATCH4Q5T3I0 446 aaKnown RBP16.72■□□□□ 0.27
SDCCAG3-211ENST00000486441 MFSD6Q6ZSS7 791 aa16.72■□□□□ 0.27
SDCCAG3-211ENST00000486441 CHST3Q7LGC8 479 aa16.72■□□□□ 0.27
SDCCAG3-211ENST00000486441 DGKHQ86XP1 1220 aa16.72■□□□□ 0.27
SDCCAG3-211ENST00000486441 TICAM2Q86XR7 235 aa16.72■□□□□ 0.27
SDCCAG3-211ENST00000486441 NSUN6Q8TEA1 469 aaKnown RBP16.72■□□□□ 0.27
SDCCAG3-211ENST00000486441 RAD9AQ99638 391 aa16.72■□□□□ 0.27
SDCCAG3-211ENST00000486441 KIAA1217Q5T5P2 1943 aa16.71■□□□□ 0.27
SDCCAG3-211ENST00000486441 PI4K2BG5E9Z4 385 aa16.71■□□□□ 0.27
SDCCAG3-211ENST00000486441 F2P00734 622 aa16.71■□□□□ 0.27
SDCCAG3-211ENST00000486441 PCP11498 1178 aaKnown RBP16.71■□□□□ 0.27
SDCCAG3-211ENST00000486441 CASTP20810 708 aaKnown RBP16.71■□□□□ 0.27
SDCCAG3-211ENST00000486441 KCNJ6P48051 423 aa16.71■□□□□ 0.27
SDCCAG3-211ENST00000486441 PSEN2P49810 448 aa16.71■□□□□ 0.27
SDCCAG3-211ENST00000486441 QRICH1Q2TAL8 776 aa16.71■□□□□ 0.27
SDCCAG3-211ENST00000486441 ZNF618Q5T7W0 954 aa16.71■□□□□ 0.27
SDCCAG3-211ENST00000486441 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.71■□□□□ 0.27
SDCCAG3-211ENST00000486441 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.71■□□□□ 0.27
SDCCAG3-211ENST00000486441 IWS1Q96ST2 819 aa16.71■□□□□ 0.27
SDCCAG3-211ENST00000486441 RMDN3Q96TC7 470 aa16.71■□□□□ 0.27
SDCCAG3-211ENST00000486441 MPHOSPH6Q99547 160 aaKnown RBP16.71■□□□□ 0.27
SDCCAG3-211ENST00000486441 OSBPL7Q9BZF2 842 aa16.71■□□□□ 0.27
SDCCAG3-211ENST00000486441 JMJD4Q9H9V9 463 aa16.71■□□□□ 0.27
SDCCAG3-211ENST00000486441 C5orf42Q9H799 3197 aa16.71■□□□□ 0.27
SDCCAG3-211ENST00000486441 COL4A4P53420 1690 aaPredicted RBP16.71■□□□□ 0.27
SDCCAG3-211ENST00000486441 ABCB11O95342 1321 aa16.7■□□□□ 0.26
SDCCAG3-211ENST00000486441 CCDC171Q6TFL3 1326 aa16.7■□□□□ 0.26
SDCCAG3-211ENST00000486441 ABHD14A-ACY1A0A1B0GW23 586 aa16.7■□□□□ 0.26
SDCCAG3-211ENST00000486441 B4DLN1 442 aa16.7■□□□□ 0.26
SDCCAG3-211ENST00000486441 MRPL12P52815 198 aaKnown RBP16.7■□□□□ 0.26
SDCCAG3-211ENST00000486441 GHRHRQ02643 423 aa16.7■□□□□ 0.26
SDCCAG3-211ENST00000486441 PTK7Q13308 1070 aa16.7■□□□□ 0.26
SDCCAG3-211ENST00000486441 STXBP2Q15833 593 aa16.7■□□□□ 0.26
SDCCAG3-211ENST00000486441 TMEM31Q5JXX7 168 aa16.7■□□□□ 0.26
SDCCAG3-211ENST00000486441 PNMA1Q8ND90 353 aa16.7■□□□□ 0.26
SDCCAG3-211ENST00000486441 MTUS1Q9ULD2 1270 aa16.7■□□□□ 0.26
SDCCAG3-211ENST00000486441 FAM86C2PA6NEL3 165 aa16.69■□□□□ 0.26
SDCCAG3-211ENST00000486441 EIF3JO75822 258 aaKnown RBP16.69■□□□□ 0.26
SDCCAG3-211ENST00000486441 PARNO95453 639 aaKnown RBP16.69■□□□□ 0.26
SDCCAG3-211ENST00000486441 NR3C2P08235 984 aa16.69■□□□□ 0.26
SDCCAG3-211ENST00000486441 SP2Q02086 613 aa16.69■□□□□ 0.26
SDCCAG3-211ENST00000486441 DGKDQ16760 1214 aa16.69■□□□□ 0.26
SDCCAG3-211ENST00000486441 KIAA0753Q2KHM9 967 aa16.69■□□□□ 0.26
SDCCAG3-211ENST00000486441 SLC35G1Q2M3R5 365 aa16.69■□□□□ 0.26
SDCCAG3-211ENST00000486441 MYSM1Q5VVJ2 828 aa16.69■□□□□ 0.26
SDCCAG3-211ENST00000486441 FAM178BQ8IXR5 827 aa16.69■□□□□ 0.26
SDCCAG3-211ENST00000486441 CCDC155Q8N6L0 562 aa16.69■□□□□ 0.26
SDCCAG3-211ENST00000486441 TGS1Q96RS0 853 aaKnown RBP16.69■□□□□ 0.26
SDCCAG3-211ENST00000486441 C17orf80Q9BSJ5 609 aa16.69■□□□□ 0.26
SDCCAG3-211ENST00000486441 ALG1Q9BT22 464 aa16.69■□□□□ 0.26
SDCCAG3-211ENST00000486441 BCAS3Q9H6U6 928 aa16.69■□□□□ 0.26
SDCCAG3-211ENST00000486441 UBE2ZQ9H832 354 aaPredicted RBP16.69■□□□□ 0.26
SDCCAG3-211ENST00000486441 PXMP2Q9NR77 195 aa16.69■□□□□ 0.26
SDCCAG3-211ENST00000486441 PPP1R11O60927 126 aaPredicted RBP16.68■□□□□ 0.26
SDCCAG3-211ENST00000486441 ZNF286BP0CG31 522 aa16.68■□□□□ 0.26
SDCCAG3-211ENST00000486441 EIF2AK2P19525 551 aaKnown RBP16.68■□□□□ 0.26
SDCCAG3-211ENST00000486441 HSD17B4P51659 736 aa16.68■□□□□ 0.26
SDCCAG3-211ENST00000486441 HTRA4P83105 476 aaPredicted RBP16.68■□□□□ 0.26
SDCCAG3-211ENST00000486441 LAMC2Q13753 1193 aa16.68■□□□□ 0.26
SDCCAG3-211ENST00000486441 MFSD10Q14728 455 aa16.68■□□□□ 0.26
SDCCAG3-211ENST00000486441 LEXMQ3ZCV2 418 aa16.68■□□□□ 0.26
SDCCAG3-211ENST00000486441 FAM117BQ6P1L5 589 aa16.68■□□□□ 0.26
SDCCAG3-211ENST00000486441 ENAHQ8N8S7 591 aaPredicted RBP16.68■□□□□ 0.26
SDCCAG3-211ENST00000486441 PPTC7Q8NI37 304 aa16.68■□□□□ 0.26
SDCCAG3-211ENST00000486441 SP7Q8TDD2 431 aaPredicted RBP16.68■□□□□ 0.26
SDCCAG3-211ENST00000486441 ESR2Q92731 530 aa16.68■□□□□ 0.26
SDCCAG3-211ENST00000486441 ZBED2Q9BTP6 218 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 182.4 ms