RNA–Protein interactions for RNA: ENST00000485140.1

VPS50-217, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-217ENST00000485140 FAM26FQ5R3K3 315 aa5.61□□□□□ -1.51
VPS50-217ENST00000485140 BORAQ6PGQ7 559 aa5.61□□□□□ -1.51
VPS50-217ENST00000485140 C6orf15Q6UXA7 325 aaPredicted RBP5.61□□□□□ -1.51
VPS50-217ENST00000485140 FAM126BQ8IXS8 530 aa5.61□□□□□ -1.51
VPS50-217ENST00000485140 CARFQ8N187 725 aa5.61□□□□□ -1.51
VPS50-217ENST00000485140 SMARCC2Q8TAQ2 1214 aa5.61□□□□□ -1.51
VPS50-217ENST00000485140 KCTD13Q8WZ19 329 aa5.61□□□□□ -1.51
VPS50-217ENST00000485140 ZNF669Q96BR6 464 aaPredicted RBP5.61□□□□□ -1.51
VPS50-217ENST00000485140 TRMT2BQ96GJ1 504 aaKnown RBP5.61□□□□□ -1.51
VPS50-217ENST00000485140 DGKIO75912 1065 aa5.6□□□□□ -1.51
VPS50-217ENST00000485140 FGRP09769 529 aa5.6□□□□□ -1.51
VPS50-217ENST00000485140 NKX3-2P78367 333 aa5.6□□□□□ -1.51
VPS50-217ENST00000485140 LSAMPQ13449 338 aa5.6□□□□□ -1.51
VPS50-217ENST00000485140 SURF1Q15526 300 aa5.6□□□□□ -1.51
VPS50-217ENST00000485140 UBXN11Q5T124 520 aa5.6□□□□□ -1.51
VPS50-217ENST00000485140 TRIM48Q8IWZ4 208 aa5.6□□□□□ -1.51
VPS50-217ENST00000485140 KYQ8NBH2 561 aa5.6□□□□□ -1.51
VPS50-217ENST00000485140 TP53I13Q8NBR0 393 aaPredicted RBP5.6□□□□□ -1.51
VPS50-217ENST00000485140 FRS2Q8WU20 508 aa5.6□□□□□ -1.51
VPS50-217ENST00000485140 GMLQ99445 158 aa5.6□□□□□ -1.51
VPS50-217ENST00000485140 EPB41L1Q9H4G0 881 aa5.6□□□□□ -1.51
VPS50-217ENST00000485140 PALD1Q9ULE6 856 aa5.6□□□□□ -1.51
VPS50-217ENST00000485140 KRIT1O00522 736 aa5.59□□□□□ -1.51
VPS50-217ENST00000485140 HGSO14964 777 aaPredicted RBP5.59□□□□□ -1.51
VPS50-217ENST00000485140 ITGAVP06756 1048 aa5.59□□□□□ -1.51
VPS50-217ENST00000485140 RPL13P26373 211 aaKnown RBP5.59□□□□□ -1.51
VPS50-217ENST00000485140 KCNJ6P48051 423 aa5.59□□□□□ -1.51
VPS50-217ENST00000485140 HSP90AA2PQ14568 343 aaPredicted RBP5.59□□□□□ -1.51
VPS50-217ENST00000485140 PLEKHH3Q7Z736 793 aa5.59□□□□□ -1.51
VPS50-217ENST00000485140 PPIL6Q8IXY8 311 aa5.59□□□□□ -1.51
VPS50-217ENST00000485140 FEZF2Q8TBJ5 459 aa5.59□□□□□ -1.51
VPS50-217ENST00000485140 BTN2A2Q8WVV5 523 aa5.59□□□□□ -1.51
VPS50-217ENST00000485140 ZFYVE21Q9BQ24 234 aa5.59□□□□□ -1.51
VPS50-217ENST00000485140 GPRC5CQ9NQ84 441 aa5.59□□□□□ -1.51
VPS50-217ENST00000485140 C9orf118A6NHY6 69 aa5.58□□□□□ -1.52
VPS50-217ENST00000485140 APPP05067 770 aa5.58□□□□□ -1.52
VPS50-217ENST00000485140 ECI1P42126 302 aa5.58□□□□□ -1.52
VPS50-217ENST00000485140 GFRA1P56159 465 aa5.58□□□□□ -1.52
VPS50-217ENST00000485140 EMC4Q5J8M3 183 aa5.58□□□□□ -1.52
VPS50-217ENST00000485140 CEP68Q76N32 757 aa5.58□□□□□ -1.52
VPS50-217ENST00000485140 LRRC47Q8N1G4 583 aaKnown RBP5.58□□□□□ -1.52
VPS50-217ENST00000485140 ST13P5Q8NFI4 369 aaPredicted RBP5.58□□□□□ -1.52
VPS50-217ENST00000485140 ZBTB8AQ96BR9 441 aa5.58□□□□□ -1.52
VPS50-217ENST00000485140 TMEM209Q96SK2 561 aa5.58□□□□□ -1.52
VPS50-217ENST00000485140 GPR27Q9NS67 375 aa5.58□□□□□ -1.52
VPS50-217ENST00000485140 HCFC2Q9Y5Z7 792 aa5.58□□□□□ -1.52
VPS50-217ENST00000485140 PLA2G1BP04054 148 aaKnown RBP5.57□□□□□ -1.52
VPS50-217ENST00000485140 ADRB1P08588 477 aa5.57□□□□□ -1.52
VPS50-217ENST00000485140 PLP2Q04941 152 aa5.57□□□□□ -1.52
VPS50-217ENST00000485140 NT5DC1Q5TFE4 455 aa5.57□□□□□ -1.52
VPS50-217ENST00000485140 MILR1Q7Z6M3 343 aa5.57□□□□□ -1.52
VPS50-217ENST00000485140 LGI4Q8N135 537 aa5.57□□□□□ -1.52
VPS50-217ENST00000485140 DPF3Q92784 378 aa5.57□□□□□ -1.52
VPS50-217ENST00000485140 TINF2Q9BSI4 451 aa5.57□□□□□ -1.52
VPS50-217ENST00000485140 C11orf84Q9BUA3 381 aaPredicted RBP5.57□□□□□ -1.52
VPS50-217ENST00000485140 KRTAP9-3Q9BYQ3 159 aa5.57□□□□□ -1.52
VPS50-217ENST00000485140 ZNF408Q9H9D4 720 aa5.57□□□□□ -1.52
VPS50-217ENST00000485140 BTG4Q9NY30 223 aa5.57□□□□□ -1.52
VPS50-217ENST00000485140 HSPBP1Q9NZL4 362 aa5.57□□□□□ -1.52
VPS50-217ENST00000485140 MRVI1Q9Y6F6 885 aa5.57□□□□□ -1.52
VPS50-217ENST00000485140 K7ESM1 405 aa5.56□□□□□ -1.52
VPS50-217ENST00000485140 U2SURPO15042 1029 aaKnown RBP5.56□□□□□ -1.52
VPS50-217ENST00000485140 NOBOXO60393 691 aa5.56□□□□□ -1.52
VPS50-217ENST00000485140 PPP1R11O60927 126 aaPredicted RBP5.56□□□□□ -1.52
VPS50-217ENST00000485140 NAT1P18440 290 aa5.56□□□□□ -1.52
VPS50-217ENST00000485140 THBS2P35442 1172 aa5.56□□□□□ -1.52
VPS50-217ENST00000485140 VMACQ2NL98 169 aa5.56□□□□□ -1.52
VPS50-217ENST00000485140 SLC10A6Q3KNW5 377 aa5.56□□□□□ -1.52
VPS50-217ENST00000485140 NBPF6Q5VWK0 638 aa5.56□□□□□ -1.52
VPS50-217ENST00000485140 CD300LDQ6UXZ3 194 aa5.56□□□□□ -1.52
VPS50-217ENST00000485140 PRRT2Q7Z6L0 340 aaPredicted RBP5.56□□□□□ -1.52
VPS50-217ENST00000485140 TEX2Q8IWB9 1127 aa5.56□□□□□ -1.52
VPS50-217ENST00000485140 TTC9BQ8N6N2 239 aa5.56□□□□□ -1.52
VPS50-217ENST00000485140 TOE1Q96GM8 510 aaKnown RBP5.56□□□□□ -1.52
VPS50-217ENST00000485140 NBPF4Q96M43 638 aa5.56□□□□□ -1.52
VPS50-217ENST00000485140 CLIC6Q96NY7 704 aa5.56□□□□□ -1.52
VPS50-217ENST00000485140 LNPKQ9C0E8 428 aa5.56□□□□□ -1.52
VPS50-217ENST00000485140 SMOC1Q9H4F8 434 aa5.56□□□□□ -1.52
VPS50-217ENST00000485140 PCDHB4Q9Y5E5 795 aa5.56□□□□□ -1.52
VPS50-217ENST00000485140 NPFFR2Q9Y5X5 522 aa5.56□□□□□ -1.52
VPS50-217ENST00000485140 SGSM2O43147 1006 aa5.55□□□□□ -1.52
VPS50-217ENST00000485140 CHGBP05060 677 aa5.55□□□□□ -1.52
VPS50-217ENST00000485140 C8BP07358 591 aa5.55□□□□□ -1.52
VPS50-217ENST00000485140 ETFBP38117 255 aa5.55□□□□□ -1.52
VPS50-217ENST00000485140 BCL6P41182 706 aa5.55□□□□□ -1.52
VPS50-217ENST00000485140 BUD31P41223 144 aaPredicted RBP5.55□□□□□ -1.52
VPS50-217ENST00000485140 MC3RP41968 323 aa5.55□□□□□ -1.52
VPS50-217ENST00000485140 EFEMP1Q12805 493 aa5.55□□□□□ -1.52
VPS50-217ENST00000485140 DDR2Q16832 855 aa5.55□□□□□ -1.52
VPS50-217ENST00000485140 ZNF827Q17R98 1081 aa5.55□□□□□ -1.52
VPS50-217ENST00000485140 INF2Q27J81 1249 aa5.55□□□□□ -1.52
VPS50-217ENST00000485140 SLC35F1Q5T1Q4 408 aa5.55□□□□□ -1.52
VPS50-217ENST00000485140 STEAP3Q658P3 488 aa5.55□□□□□ -1.52
VPS50-217ENST00000485140 MBLAC2Q68D91 279 aa5.55□□□□□ -1.52
VPS50-217ENST00000485140 ZDHHC14Q8IZN3 488 aa5.55□□□□□ -1.52
VPS50-217ENST00000485140 KREMEN2Q8NCW0 462 aa5.55□□□□□ -1.52
VPS50-217ENST00000485140 TTLL11Q8NHH1 800 aa5.55□□□□□ -1.52
VPS50-217ENST00000485140 ADAMTS17Q8TE56 1095 aa5.55□□□□□ -1.52
VPS50-217ENST00000485140 ZNF526Q8TF50 670 aaPredicted RBP5.55□□□□□ -1.52
VPS50-217ENST00000485140 DCAF4Q8WV16 495 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms