RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 IMPACTQ9P2X3 320 aa5.65□□□□□ -1.5
COPA-204ENST00000481522 EMC9Q9Y3B6 208 aa5.65□□□□□ -1.5
COPA-204ENST00000481522 TRBV23OR9-2A0A075B6M9 112 aa5.64□□□□□ -1.51
COPA-204ENST00000481522 A0A1W2PQJ5 194 aa5.64□□□□□ -1.51
COPA-204ENST00000481522 C2orf71A6NGG8 1288 aa5.64□□□□□ -1.51
COPA-204ENST00000481522 U2SURPO15042 1029 aaKnown RBP5.64□□□□□ -1.51
COPA-204ENST00000481522 GJB6O95452 261 aa5.64□□□□□ -1.51
COPA-204ENST00000481522 YY1P25490 414 aa5.64□□□□□ -1.51
COPA-204ENST00000481522 JMJD8Q96S16 334 aa5.64□□□□□ -1.51
COPA-204ENST00000481522 ST7Q9NRC1 585 aa5.64□□□□□ -1.51
COPA-204ENST00000481522 NUDT19A8MXV4 375 aa5.63□□□□□ -1.51
COPA-204ENST00000481522 ZNF20P17024 532 aa5.63□□□□□ -1.51
COPA-204ENST00000481522 PFKLP17858 780 aa5.63□□□□□ -1.51
COPA-204ENST00000481522 IGFBP6P24592 240 aaPredicted RBP5.63□□□□□ -1.51
COPA-204ENST00000481522 L1CAMP32004 1257 aa5.63□□□□□ -1.51
COPA-204ENST00000481522 RBM10P98175 930 aaKnown RBP5.63□□□□□ -1.51
COPA-204ENST00000481522 CYP4F8P98187 520 aa5.63□□□□□ -1.51
COPA-204ENST00000481522 CBX2Q14781 532 aaPredicted RBP5.63□□□□□ -1.51
COPA-204ENST00000481522 KIR3DS1Q14943 382 aa5.63□□□□□ -1.51
COPA-204ENST00000481522 MRM1Q6IN84 353 aaKnown RBP5.63□□□□□ -1.51
COPA-204ENST00000481522 FERMT3Q86UX7 667 aa5.63□□□□□ -1.51
COPA-204ENST00000481522 TRIM59Q8IWR1 403 aa5.63□□□□□ -1.51
COPA-204ENST00000481522 CELF2-AS1Q8N7Q2 184 aa5.63□□□□□ -1.51
COPA-204ENST00000481522 ZNF513Q8N8E2 541 aaPredicted RBP5.63□□□□□ -1.51
COPA-204ENST00000481522 TMEM52Q8NDY8 209 aa5.63□□□□□ -1.51
COPA-204ENST00000481522 MICAL1Q8TDZ2 1067 aa5.63□□□□□ -1.51
COPA-204ENST00000481522 DRC1Q96MC2 740 aa5.63□□□□□ -1.51
COPA-204ENST00000481522 MCMBPQ9BTE3 642 aa5.63□□□□□ -1.51
COPA-204ENST00000481522 EPN3Q9H201 632 aa5.63□□□□□ -1.51
COPA-204ENST00000481522 TOP2BQ02880 1626 aa5.63□□□□□ -1.51
COPA-204ENST00000481522 NPHP3-ACAD11A0A0J9YXS1 232 aa5.62□□□□□ -1.51
COPA-204ENST00000481522 KLF4O43474 513 aa5.62□□□□□ -1.51
COPA-204ENST00000481522 PAMP19021 973 aa5.62□□□□□ -1.51
COPA-204ENST00000481522 LIMS1P48059 325 aa5.62□□□□□ -1.51
COPA-204ENST00000481522 CORO7P57737 925 aa5.62□□□□□ -1.51
COPA-204ENST00000481522 SCRN1Q12765 414 aa5.62□□□□□ -1.51
COPA-204ENST00000481522 RAB33AQ14088 237 aa5.62□□□□□ -1.51
COPA-204ENST00000481522 NT5DC1Q5TFE4 455 aa5.62□□□□□ -1.51
COPA-204ENST00000481522 NBPF6Q5VWK0 638 aa5.62□□□□□ -1.51
COPA-204ENST00000481522 GTF2IRD2BQ6EKJ0 949 aa5.62□□□□□ -1.51
COPA-204ENST00000481522 GTF2IRD2Q86UP8 949 aa5.62□□□□□ -1.51
COPA-204ENST00000481522 ZNF227Q86WZ6 799 aa5.62□□□□□ -1.51
COPA-204ENST00000481522 NBPF4Q96M43 638 aa5.62□□□□□ -1.51
COPA-204ENST00000481522 TNFRSF12AQ9NP84 129 aa5.62□□□□□ -1.51
COPA-204ENST00000481522 ACSL6Q9UKU0 697 aa5.62□□□□□ -1.51
COPA-204ENST00000481522 IRS2Q9Y4H2 1338 aa5.62□□□□□ -1.51
COPA-204ENST00000481522 ITGAVP06756 1048 aa5.61□□□□□ -1.51
COPA-204ENST00000481522 HSPA1LP34931 641 aa5.61□□□□□ -1.51
COPA-204ENST00000481522 ATXN1P54253 815 aaKnown RBP5.61□□□□□ -1.51
COPA-204ENST00000481522 SLC10A6Q3KNW5 377 aa5.61□□□□□ -1.51
COPA-204ENST00000481522 SOGA3Q5TF21 947 aa5.61□□□□□ -1.51
COPA-204ENST00000481522 LIPIQ6XZB0 460 aa5.61□□□□□ -1.51
COPA-204ENST00000481522 CABP7Q86V35 215 aa5.61□□□□□ -1.51
COPA-204ENST00000481522 BTN2A2Q8WVV5 523 aa5.61□□□□□ -1.51
COPA-204ENST00000481522 LGR4Q9BXB1 951 aa5.61□□□□□ -1.51
COPA-204ENST00000481522 NKX2-4Q9H2Z4 354 aa5.61□□□□□ -1.51
COPA-204ENST00000481522 MRC2Q9UBG0 1479 aa5.6□□□□□ -1.51
COPA-204ENST00000481522 SNRPB2P08579 225 aaKnown RBP5.6□□□□□ -1.51
COPA-204ENST00000481522 TACR1P25103 407 aa5.6□□□□□ -1.51
COPA-204ENST00000481522 CEBPAP49715 358 aaPredicted RBP5.6□□□□□ -1.51
COPA-204ENST00000481522 KRTAP10-7P60409 375 aaPredicted RBP5.6□□□□□ -1.51
COPA-204ENST00000481522 PLEKHN1Q494U1 663 aaPredicted RBP5.6□□□□□ -1.51
COPA-204ENST00000481522 VWA3BQ502W6 1294 aa5.6□□□□□ -1.51
COPA-204ENST00000481522 LRCH2Q5VUJ6 765 aa5.6□□□□□ -1.51
COPA-204ENST00000481522 BICRALQ6AI39 1079 aa5.6□□□□□ -1.51
COPA-204ENST00000481522 RPTNQ6XPR3 784 aa5.6□□□□□ -1.51
COPA-204ENST00000481522 UBXN4Q92575 508 aa5.6□□□□□ -1.51
COPA-204ENST00000481522 MRGPRX3Q96LB0 322 aa5.6□□□□□ -1.51
COPA-204ENST00000481522 SPATA25Q9BR10 227 aa5.6□□□□□ -1.51
COPA-204ENST00000481522 PDLIM7Q9NR12 457 aa5.6□□□□□ -1.51
COPA-204ENST00000481522 CYP26B1Q9NR63 512 aa5.6□□□□□ -1.51
COPA-204ENST00000481522 CLEC1BQ9P126 229 aa5.6□□□□□ -1.51
COPA-204ENST00000481522 TBX1O43435 398 aa5.59□□□□□ -1.51
COPA-204ENST00000481522 ITGB3P05106 788 aa5.59□□□□□ -1.51
COPA-204ENST00000481522 THBDP07204 575 aa5.59□□□□□ -1.51
COPA-204ENST00000481522 MSL3P1P0C860 447 aa5.59□□□□□ -1.51
COPA-204ENST00000481522 PLS3P13797 630 aa5.59□□□□□ -1.51
COPA-204ENST00000481522 KCNJ6P48051 423 aa5.59□□□□□ -1.51
COPA-204ENST00000481522 ZNF200P98182 395 aaPredicted RBP5.59□□□□□ -1.51
COPA-204ENST00000481522 MVKQ03426 396 aa5.59□□□□□ -1.51
COPA-204ENST00000481522 RBL2Q08999 1139 aa5.59□□□□□ -1.51
COPA-204ENST00000481522 NR1I3Q14994 352 aa5.59□□□□□ -1.51
COPA-204ENST00000481522 TARBP2Q15633 366 aaKnown RBP5.59□□□□□ -1.51
COPA-204ENST00000481522 ZC3H14Q6PJT7 736 aaKnown RBP5.59□□□□□ -1.51
COPA-204ENST00000481522 CPNE8Q86YQ8 564 aa5.59□□□□□ -1.51
COPA-204ENST00000481522 COPS5Q92905 334 aa5.59□□□□□ -1.51
COPA-204ENST00000481522 DNAJC2Q99543 621 aaKnown RBP5.59□□□□□ -1.51
COPA-204ENST00000481522 A0A1B0GTL3 188 aa5.58□□□□□ -1.52
COPA-204ENST00000481522 IQCA1LA6NCM1 817 aa5.58□□□□□ -1.52
COPA-204ENST00000481522 CPP00450 1065 aa5.58□□□□□ -1.52
COPA-204ENST00000481522 HOXC12P31275 282 aa5.58□□□□□ -1.52
COPA-204ENST00000481522 ECI1P42126 302 aa5.58□□□□□ -1.52
COPA-204ENST00000481522 MAPKAPK2P49137 400 aa5.58□□□□□ -1.52
COPA-204ENST00000481522 ADGRG2Q8IZP9 1017 aa5.58□□□□□ -1.52
COPA-204ENST00000481522 ST13P5Q8NFI4 369 aaPredicted RBP5.58□□□□□ -1.52
COPA-204ENST00000481522 FNIP1Q8TF40 1166 aa5.58□□□□□ -1.52
COPA-204ENST00000481522 GPRC5CQ9NQ84 441 aa5.58□□□□□ -1.52
COPA-204ENST00000481522 SIRPGQ9P1W8 387 aa5.58□□□□□ -1.52
COPA-204ENST00000481522 RWDD3Q9Y3V2 267 aa5.58□□□□□ -1.52
COPA-204ENST00000481522 CCDC85CA6NKD9 419 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms