RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 SLC6A14Q9UN76 642 aa5.85□□□□□ -1.47
PTCD3-213ENST00000480102 AGTPBP1Q9UPW5 1226 aa5.85□□□□□ -1.47
PTCD3-213ENST00000480102 USP20Q9Y2K6 914 aa5.85□□□□□ -1.47
PTCD3-213ENST00000480102 STARD13Q9Y3M8 1113 aa5.85□□□□□ -1.47
PTCD3-213ENST00000480102 SUPT16HQ9Y5B9 1047 aaKnown RBP5.85□□□□□ -1.47
PTCD3-213ENST00000480102 ZHX2Q9Y6X8 837 aa5.85□□□□□ -1.47
PTCD3-213ENST00000480102 TRPM7Q96QT4 1865 aa5.85□□□□□ -1.47
PTCD3-213ENST00000480102 PLIN4Q96Q06 1357 aa5.84□□□□□ -1.47
PTCD3-213ENST00000480102 RAD50Q92878 1312 aa5.84□□□□□ -1.47
PTCD3-213ENST00000480102 GSG1L2A8MUP6 293 aa5.84□□□□□ -1.47
PTCD3-213ENST00000480102 PATL2C9JE40 543 aaKnown RBP5.84□□□□□ -1.47
PTCD3-213ENST00000480102 BTBD19C9JJ37 291 aa5.84□□□□□ -1.47
PTCD3-213ENST00000480102 M0R082 166 aa5.84□□□□□ -1.47
PTCD3-213ENST00000480102 TRPA1O75762 1119 aa5.84□□□□□ -1.47
PTCD3-213ENST00000480102 MBD4O95243 580 aa5.84□□□□□ -1.47
PTCD3-213ENST00000480102 MAP3K6O95382 1288 aa5.84□□□□□ -1.47
PTCD3-213ENST00000480102 SHMT1P34896 483 aa5.84□□□□□ -1.47
PTCD3-213ENST00000480102 USP5P45974 858 aa5.84□□□□□ -1.47
PTCD3-213ENST00000480102 RGS19P49795 217 aa5.84□□□□□ -1.47
PTCD3-213ENST00000480102 SP3Q02447 781 aa5.84□□□□□ -1.47
PTCD3-213ENST00000480102 TBC1D8BQ0IIM8 1120 aa5.84□□□□□ -1.47
PTCD3-213ENST00000480102 CRHR2Q13324 411 aa5.84□□□□□ -1.47
PTCD3-213ENST00000480102 PICALMQ13492 652 aa5.84□□□□□ -1.47
PTCD3-213ENST00000480102 CERKLQ49MI3 558 aaPredicted RBP5.84□□□□□ -1.47
PTCD3-213ENST00000480102 COL13A1Q5TAT6 717 aaPredicted RBP5.84□□□□□ -1.47
PTCD3-213ENST00000480102 KRT25Q7Z3Z0 450 aa5.84□□□□□ -1.47
PTCD3-213ENST00000480102 MICALL1Q8N3F8 863 aa5.84□□□□□ -1.47
PTCD3-213ENST00000480102 CRACR2BQ8N4Y2 399 aaPredicted RBP5.84□□□□□ -1.47
PTCD3-213ENST00000480102 MIGA1Q8NAN2 632 aa5.84□□□□□ -1.47
PTCD3-213ENST00000480102 EXOC6Q8TAG9 804 aa5.84□□□□□ -1.47
PTCD3-213ENST00000480102 ZNF417Q8TAU3 575 aa5.84□□□□□ -1.47
PTCD3-213ENST00000480102 ZNF296Q8WUU4 475 aaPredicted RBP5.84□□□□□ -1.47
PTCD3-213ENST00000480102 OSBP2Q969R2 916 aa5.84□□□□□ -1.47
PTCD3-213ENST00000480102 MKL1Q969V6 931 aa5.84□□□□□ -1.47
PTCD3-213ENST00000480102 YTHDC1Q96MU7 727 aaKnown RBP5.84□□□□□ -1.47
PTCD3-213ENST00000480102 ZNF587Q96SQ5 575 aaPredicted RBP5.84□□□□□ -1.47
PTCD3-213ENST00000480102 MAF1Q9H063 256 aa5.84□□□□□ -1.47
PTCD3-213ENST00000480102 PUS7LQ9H0K6 701 aaKnown RBP5.84□□□□□ -1.47
PTCD3-213ENST00000480102 IGFLR1Q9H665 355 aa5.84□□□□□ -1.47
PTCD3-213ENST00000480102 KANSL2Q9H9L4 492 aa5.84□□□□□ -1.47
PTCD3-213ENST00000480102 CABP5Q9NP86 173 aa5.84□□□□□ -1.47
PTCD3-213ENST00000480102 PRDM6Q9NQX0 595 aa5.84□□□□□ -1.47
PTCD3-213ENST00000480102 DNAJB12Q9NXW2 375 aaKnown RBP5.84□□□□□ -1.47
PTCD3-213ENST00000480102 ZFATQ9P243 1243 aa5.84□□□□□ -1.47
PTCD3-213ENST00000480102 MORF4L1Q9UBU8 362 aa5.84□□□□□ -1.47
PTCD3-213ENST00000480102 PALD1Q9ULE6 856 aa5.84□□□□□ -1.47
PTCD3-213ENST00000480102 LAMB1P07942 1786 aa5.84□□□□□ -1.47
PTCD3-213ENST00000480102 MAST2Q6P0Q8 1798 aa5.84□□□□□ -1.47
PTCD3-213ENST00000480102 KRBA1A5PL33 1030 aa5.83□□□□□ -1.48
PTCD3-213ENST00000480102 GPAA1O43292 621 aa5.83□□□□□ -1.48
PTCD3-213ENST00000480102 EPB41L2O43491 1005 aaKnown RBP5.83□□□□□ -1.48
PTCD3-213ENST00000480102 SMARCA5O60264 1052 aaPredicted RBP5.83□□□□□ -1.48
PTCD3-213ENST00000480102 PLA2G6O60733 806 aa5.83□□□□□ -1.48
PTCD3-213ENST00000480102 SASH3O75995 380 aa5.83□□□□□ -1.48
PTCD3-213ENST00000480102 IGHA1P01876 353 aa5.83□□□□□ -1.48
PTCD3-213ENST00000480102 IGHDP01880 384 aa5.83□□□□□ -1.48
PTCD3-213ENST00000480102 ITGB2P05107 769 aa5.83□□□□□ -1.48
PTCD3-213ENST00000480102 SLC3A2P08195 630 aaKnown RBP5.83□□□□□ -1.48
PTCD3-213ENST00000480102 RARAP10276 462 aa5.83□□□□□ -1.48
PTCD3-213ENST00000480102 TARSP26639 723 aaKnown RBP5.83□□□□□ -1.48
PTCD3-213ENST00000480102 PLCD1P51178 756 aa5.83□□□□□ -1.48
PTCD3-213ENST00000480102 DYNLL1P63167 89 aaKnown RBP5.83□□□□□ -1.48
PTCD3-213ENST00000480102 LACTBP83111 547 aaPredicted RBP5.83□□□□□ -1.48
PTCD3-213ENST00000480102 TAF1CQ15572 869 aaPredicted RBP5.83□□□□□ -1.48
PTCD3-213ENST00000480102 RCSD1Q6JBY9 416 aa5.83□□□□□ -1.48
PTCD3-213ENST00000480102 CTR9Q6PD62 1173 aa5.83□□□□□ -1.48
PTCD3-213ENST00000480102 FBXO46Q6PJ61 603 aaPredicted RBP5.83□□□□□ -1.48
PTCD3-213ENST00000480102 C20orf204Q6ZNR8 217 aa5.83□□□□□ -1.48
PTCD3-213ENST00000480102 C8orf86Q6ZUL3 223 aa5.83□□□□□ -1.48
PTCD3-213ENST00000480102 CENPQQ7L2Z9 268 aaPredicted RBP5.83□□□□□ -1.48
PTCD3-213ENST00000480102 DHX32Q7L7V1 743 aaKnown RBP5.83□□□□□ -1.48
PTCD3-213ENST00000480102 MAPKAPK5Q8IW41 473 aa5.83□□□□□ -1.48
PTCD3-213ENST00000480102 CMTR1Q8N1G2 835 aaKnown RBP5.83□□□□□ -1.48
PTCD3-213ENST00000480102 FAM43AQ8N2R8 423 aa5.83□□□□□ -1.48
PTCD3-213ENST00000480102 LCORLQ8N3X6 602 aa5.83□□□□□ -1.48
PTCD3-213ENST00000480102 MB21D1Q8N884 522 aa5.83□□□□□ -1.48
PTCD3-213ENST00000480102 ARMC5Q96C12 935 aa5.83□□□□□ -1.48
PTCD3-213ENST00000480102 MCM9Q9NXL9 1143 aa5.83□□□□□ -1.48
PTCD3-213ENST00000480102 NYAP2Q9P242 653 aa5.83□□□□□ -1.48
PTCD3-213ENST00000480102 STIM2Q9P246 746 aa5.83□□□□□ -1.48
PTCD3-213ENST00000480102 SEPT3Q9UH03 358 aa5.83□□□□□ -1.48
PTCD3-213ENST00000480102 NAGPAQ9UK23 515 aa5.83□□□□□ -1.48
PTCD3-213ENST00000480102 SCAF8Q9UPN6 1271 aaKnown RBP5.83□□□□□ -1.48
PTCD3-213ENST00000480102 TMX2Q9Y320 296 aa5.83□□□□□ -1.48
PTCD3-213ENST00000480102 KCNMB2Q9Y691 235 aa5.83□□□□□ -1.48
PTCD3-213ENST00000480102 ECM29Q5VYK3 1845 aa5.83□□□□□ -1.48
PTCD3-213ENST00000480102 HTTP42858 3142 aa5.82□□□□□ -1.48
PTCD3-213ENST00000480102 AKAP11Q9UKA4 1901 aa5.82□□□□□ -1.48
PTCD3-213ENST00000480102 IGKV6D-41A0A0C4DH26 115 aa5.82□□□□□ -1.48
PTCD3-213ENST00000480102 PDHXO00330 501 aa5.82□□□□□ -1.48
PTCD3-213ENST00000480102 ORC4O43929 436 aa5.82□□□□□ -1.48
PTCD3-213ENST00000480102 XYLBO75191 536 aa5.82□□□□□ -1.48
PTCD3-213ENST00000480102 BRD1O95696 1058 aa5.82□□□□□ -1.48
PTCD3-213ENST00000480102 POLR3DP05423 398 aaPredicted RBP5.82□□□□□ -1.48
PTCD3-213ENST00000480102 HOXD10P28358 340 aa5.82□□□□□ -1.48
PTCD3-213ENST00000480102 PRKG1Q13976 671 aa5.82□□□□□ -1.48
PTCD3-213ENST00000480102 COL9A3Q14050 684 aaPredicted RBP5.82□□□□□ -1.48
PTCD3-213ENST00000480102 RRP1BQ14684 758 aaKnown RBP5.82□□□□□ -1.48
PTCD3-213ENST00000480102 KIF22Q14807 665 aa5.82□□□□□ -1.48
PTCD3-213ENST00000480102 PCSK7Q16549 785 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms