RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 SUN2Q9UH99 717 aa4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 POLG2Q9UHN1 485 aa4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 TMEM59LQ9UK28 342 aa4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 MINPP1Q9UNW1 487 aa4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 DIS3Q9Y2L1 958 aaKnown RBP4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 SF3B6Q9Y3B4 125 aaKnown RBP4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 CEP164Q9UPV0 1460 aa4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 TOP2AP11388 1531 aaKnown RBP4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 RAD54L2Q9Y4B4 1467 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 DNAJC25-GNG10A0A024R161 153 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 PABPN1LA6NDY0 278 aaKnown RBP4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 H0Y8X5 98 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 BIN1O00499 593 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 TBX3O15119 743 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 KIF1CO43896 1103 aaKnown RBP4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 PLIN1O60240 522 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 CAND2O75155 1236 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 RNASEH2AO75792 299 aaKnown RBP4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 FOSP01100 380 aaPredicted RBP4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 RPN1P04843 607 aaKnown RBP4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 RBP3P10745 1247 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 KCNA2P16389 499 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 NAT1P18440 290 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 GDNFP39905 211 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 TSPAN7P41732 249 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 CTSKP43235 329 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 RGS3P49796 1198 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 TERF1P54274 439 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 WASHC5Q12768 1159 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 RAB33AQ14088 237 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 DDR2Q16832 855 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 LONRF1Q17RB8 773 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 CCDC93Q567U6 631 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 ODR4Q5SWX8 454 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 OTUD6AQ7L8S5 288 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 ATG4DQ86TL0 474 aaPredicted RBP4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 SMAP1Q8IYB5 467 aaPredicted RBP4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 NDUFAF2Q8N183 169 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 CCDC89Q8N998 374 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 ADCY4Q8NFM4 1077 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 CDHR1Q96JP9 859 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 CFAP53Q96M91 514 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 FGD4Q96M96 766 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 AGAP3Q96P47 875 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 IER2Q9BTL4 223 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 POLR3CQ9BUI4 534 aaPredicted RBP4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 ADAMTS10Q9H324 1103 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 NOL6Q9H6R4 1146 aaKnown RBP4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 CLIC5Q9NZA1 410 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 SUSD2Q9UGT4 822 aa4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 MRPL42Q9Y6G3 142 aaKnown RBP4.2□□□□□ -1.74
FNDC3B-209ENST00000478016 FANCD2Q9BXW9 1451 aa4.19□□□□□ -1.74
FNDC3B-209ENST00000478016 PRDM2Q13029 1718 aa4.19□□□□□ -1.74
FNDC3B-209ENST00000478016 B2RBV5 119 aa4.19□□□□□ -1.74
FNDC3B-209ENST00000478016 IPO5O00410 1097 aaKnown RBP4.19□□□□□ -1.74
FNDC3B-209ENST00000478016 FKTNO75072 461 aa4.19□□□□□ -1.74
FNDC3B-209ENST00000478016 ZNF205O95201 554 aa4.19□□□□□ -1.74
FNDC3B-209ENST00000478016 GJB6O95452 261 aa4.19□□□□□ -1.74
FNDC3B-209ENST00000478016 ZGLP1P0C6A0 271 aa4.19□□□□□ -1.74
FNDC3B-209ENST00000478016 RAC2P15153 192 aa4.19□□□□□ -1.74
FNDC3B-209ENST00000478016 VAV1P15498 845 aa4.19□□□□□ -1.74
FNDC3B-209ENST00000478016 RPL10P27635 214 aaKnown RBP4.19□□□□□ -1.74
FNDC3B-209ENST00000478016 NOP2P46087 812 aaKnown RBP4.19□□□□□ -1.74
FNDC3B-209ENST00000478016 HK2P52789 917 aa4.19□□□□□ -1.74
FNDC3B-209ENST00000478016 POU4F1Q01851 419 aa4.19□□□□□ -1.74
FNDC3B-209ENST00000478016 DUSP4Q13115 394 aa4.19□□□□□ -1.74
FNDC3B-209ENST00000478016 PPP2R5DQ14738 602 aa4.19□□□□□ -1.74
FNDC3B-209ENST00000478016 RALGPS1Q5JS13 557 aa4.19□□□□□ -1.74
FNDC3B-209ENST00000478016 EEPD1Q7L9B9 569 aa4.19□□□□□ -1.74
FNDC3B-209ENST00000478016 WAPLQ7Z5K2 1190 aa4.19□□□□□ -1.74
FNDC3B-209ENST00000478016 UBE2Q1Q7Z7E8 422 aa4.19□□□□□ -1.74
FNDC3B-209ENST00000478016 CELF2-AS1Q8N7Q2 184 aa4.19□□□□□ -1.74
FNDC3B-209ENST00000478016 FLAD1Q8NFF5 587 aa4.19□□□□□ -1.74
FNDC3B-209ENST00000478016 RCC1LQ96I51 464 aaKnown RBP4.19□□□□□ -1.74
FNDC3B-209ENST00000478016 ZDHHC15Q96MV8 337 aa4.19□□□□□ -1.74
FNDC3B-209ENST00000478016 ARNT2Q9HBZ2 717 aa4.19□□□□□ -1.74
FNDC3B-209ENST00000478016 C19orf73Q9NVV2 129 aa4.19□□□□□ -1.74
FNDC3B-209ENST00000478016 CGGBP1Q9UFW8 167 aaPredicted RBP4.19□□□□□ -1.74
FNDC3B-209ENST00000478016 CTNND2Q9UQB3 1225 aa4.19□□□□□ -1.74
FNDC3B-209ENST00000478016 ZNF652Q9Y2D9 606 aa4.19□□□□□ -1.74
FNDC3B-209ENST00000478016 ZNF281Q9Y2X9 895 aa4.19□□□□□ -1.74
FNDC3B-209ENST00000478016 EID1Q9Y6B2 187 aa4.19□□□□□ -1.74
FNDC3B-209ENST00000478016 A0A1W2PRQ8 180 aa4.18□□□□□ -1.74
FNDC3B-209ENST00000478016 TMEM82A0PJX8 343 aa4.18□□□□□ -1.74
FNDC3B-209ENST00000478016 NOP56O00567 594 aaKnown RBP4.18□□□□□ -1.74
FNDC3B-209ENST00000478016 SUSD5O60279 629 aa4.18□□□□□ -1.74
FNDC3B-209ENST00000478016 TCEA3O75764 348 aa4.18□□□□□ -1.74
FNDC3B-209ENST00000478016 RAPGEF3O95398 923 aa4.18□□□□□ -1.74
FNDC3B-209ENST00000478016 CCDC159P0C7I6 412 aa4.18□□□□□ -1.74
FNDC3B-209ENST00000478016 JUNBP17275 347 aaPredicted RBP4.18□□□□□ -1.74
FNDC3B-209ENST00000478016 ITGB5P18084 799 aa4.18□□□□□ -1.74
FNDC3B-209ENST00000478016 AFMP43652 599 aa4.18□□□□□ -1.74
FNDC3B-209ENST00000478016 TRAPPC10P48553 1259 aa4.18□□□□□ -1.74
FNDC3B-209ENST00000478016 CHRNEQ04844 493 aa4.18□□□□□ -1.74
FNDC3B-209ENST00000478016 GRB10Q13322 594 aa4.18□□□□□ -1.74
FNDC3B-209ENST00000478016 INO80DQ53TQ3 878 aaPredicted RBP4.18□□□□□ -1.74
FNDC3B-209ENST00000478016 MRM1Q6IN84 353 aaKnown RBP4.18□□□□□ -1.74
FNDC3B-209ENST00000478016 POMZP3Q6PJE2 187 aa4.18□□□□□ -1.74
FNDC3B-209ENST00000478016 ARHGEF39Q8N4T4 335 aa4.18□□□□□ -1.74
FNDC3B-209ENST00000478016 CRACR2BQ8N4Y2 399 aaPredicted RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms