RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 KHSRPQ92945 711 aaKnown RBP eCLIP7.83□□□□□ -1.16
RTFDC1-206ENST00000477485 TGS1Q96RS0 853 aaKnown RBP7.83□□□□□ -1.16
RTFDC1-206ENST00000477485 CPVLQ9H3G5 476 aa7.83□□□□□ -1.16
RTFDC1-206ENST00000477485 PNMA2Q9UL42 364 aa7.83□□□□□ -1.16
RTFDC1-206ENST00000477485 TRIM6-TRIM34B2RNG4 842 aa7.82□□□□□ -1.16
RTFDC1-206ENST00000477485 FOXP2O15409 715 aa7.82□□□□□ -1.16
RTFDC1-206ENST00000477485 LPXNO60711 386 aa7.82□□□□□ -1.16
RTFDC1-206ENST00000477485 CKBP12277 381 aa7.82□□□□□ -1.16
RTFDC1-206ENST00000477485 EIF2AK2P19525 551 aaKnown RBP7.82□□□□□ -1.16
RTFDC1-206ENST00000477485 PSEN2P49810 448 aa7.82□□□□□ -1.16
RTFDC1-206ENST00000477485 ZNF543Q08ER8 600 aa7.82□□□□□ -1.16
RTFDC1-206ENST00000477485 IKBKEQ14164 716 aa7.82□□□□□ -1.16
RTFDC1-206ENST00000477485 CDC37Q16543 378 aaPredicted RBP7.82□□□□□ -1.16
RTFDC1-206ENST00000477485 DGKDQ16760 1214 aa7.82□□□□□ -1.16
RTFDC1-206ENST00000477485 ANKRD45Q5TZF3 282 aa7.82□□□□□ -1.16
RTFDC1-206ENST00000477485 ARHGEF16Q5VV41 709 aa7.82□□□□□ -1.16
RTFDC1-206ENST00000477485 MFSD6Q6ZSS7 791 aa7.82□□□□□ -1.16
RTFDC1-206ENST00000477485 FBXO22Q8NEZ5 403 aa7.82□□□□□ -1.16
RTFDC1-206ENST00000477485 KATNAL1Q9BW62 490 aa7.82□□□□□ -1.16
RTFDC1-206ENST00000477485 UBA5Q9GZZ9 404 aa7.82□□□□□ -1.16
RTFDC1-206ENST00000477485 UBE2ZQ9H832 354 aaPredicted RBP7.82□□□□□ -1.16
RTFDC1-206ENST00000477485 VAT1LQ9HCJ6 419 aa7.82□□□□□ -1.16
RTFDC1-206ENST00000477485 HDAC6Q9UBN7 1215 aa7.82□□□□□ -1.16
RTFDC1-206ENST00000477485 ANAPC4Q9UJX5 808 aa7.82□□□□□ -1.16
RTFDC1-206ENST00000477485 MRVI1Q9Y6F6 885 aa7.82□□□□□ -1.16
RTFDC1-206ENST00000477485 ABCB11O95342 1321 aa7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 WDR19Q8NEZ3 1342 aa7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 A0A0D9SFI3 127 aa7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 LINC01553A4QN01 128 aa7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 NBNO60934 754 aa7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 CSPG5O95196 566 aa7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 GJB5O95377 273 aa7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 CFBP00751 764 aa7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 FGAP02671 866 aa7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 AMHP03971 560 aa7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 MYCLP12524 364 aaPredicted RBP7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 IL9P15248 144 aa7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 EDNRBP24530 442 aa7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 ARHGAP1Q07960 439 aa7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 MFSD10Q14728 455 aa7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 STXBP2Q15833 593 aa7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 KIAA0753Q2KHM9 967 aa7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 MCMDC2Q4G0Z9 681 aa7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 MYOCDQ8IZQ8 938 aa7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 NSUN6Q8TEA1 469 aaKnown RBP7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 TBC1D5Q92609 795 aa7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 DHX38Q92620 1227 aaKnown RBP7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 RILPL2Q969X0 211 aa7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 EVI5LQ96CN4 794 aa7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 FAM227BQ96M60 508 aa7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 TAAR1Q96RJ0 339 aa7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 RMDN3Q96TC7 470 aa7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 RAD9AQ99638 391 aa7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 C17orf80Q9BSJ5 609 aa7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 KAT14Q9H8E8 782 aa7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 SUGCTQ9HAC7 445 aa7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 HELLSQ9NRZ9 838 aa7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 GTF2IRD1Q9UHL9 959 aa7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 LOXHD1Q8IVV2 1947 aa7.81□□□□□ -1.16
RTFDC1-206ENST00000477485 KIAA1671Q9BY89 1806 aa7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 ABHD14A-ACY1A0A1B0GW23 586 aa7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 H3BQ06 376 aaPredicted RBP7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 GPR37L1O60883 481 aa7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 EFCAB14O75071 495 aa7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 UPP2O95045 317 aa7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 PARNO95453 639 aaKnown RBP7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 HSPD1P10809 573 aaKnown RBP7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 THPOP40225 353 aa7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 ERVK-21P61565 698 aa7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 ZNF200P98182 395 aaPredicted RBP7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 NMIQ13287 307 aaPredicted RBP7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 TCTN1Q2MV58 587 aa7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 GPATCH4Q5T3I0 446 aaKnown RBP7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 ZNF618Q5T7W0 954 aa7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 PTCRAQ6ISU1 281 aaPredicted RBP7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 CCDC62Q6P9F0 684 aa7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 ALYREFQ86V81 257 aaKnown RBP7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 FBXO11Q86XK2 927 aa7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 MCF2L2Q86YR7 1114 aa7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 TBC1D10CQ8IV04 446 aa7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 ADGRF4Q8IZF3 695 aa7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 GJD3Q8N144 294 aa7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 PNMA1Q8ND90 353 aa7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 SYTL5Q8TDW5 730 aaPredicted RBP7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 ESR2Q92731 530 aa7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 KAT2BQ92831 832 aa7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 YME1L1Q96TA2 773 aa7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 RNF41Q9H4P4 317 aaPredicted RBP7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 CD320Q9NPF0 282 aa7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 TCP11L1Q9NUJ3 509 aa7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 LMCD1Q9NZU5 365 aa7.8□□□□□ -1.16
RTFDC1-206ENST00000477485 NEDD4P46934 1319 aa7.79□□□□□ -1.16
RTFDC1-206ENST00000477485 CCDC171Q6TFL3 1326 aa7.79□□□□□ -1.16
RTFDC1-206ENST00000477485 BAZ2BQ9UIF8 2168 aaKnown RBP7.79□□□□□ -1.16
RTFDC1-206ENST00000477485 PI4K2BG5E9Z4 385 aa7.79□□□□□ -1.16
RTFDC1-206ENST00000477485 ZNF213O14771 459 aa7.79□□□□□ -1.16
RTFDC1-206ENST00000477485 KDM4AO75164 1064 aa7.79□□□□□ -1.16
RTFDC1-206ENST00000477485 LGR5O75473 907 aa7.79□□□□□ -1.16
RTFDC1-206ENST00000477485 CXCL10P02778 98 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms