RNA–Protein interactions for RNA: ENST00000476466.1

SLC6A8-209, Transcript of solute carrier family 6 member 8, humanhuman

TSL 3

Gene SLC6A8, Length 470 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-209ENST00000476466 HSPA4P34932 840 aa16.32■□□□□ 0.2
SLC6A8-209ENST00000476466 MRPS9P82933 396 aaKnown RBP16.32■□□□□ 0.2
SLC6A8-209ENST00000476466 SP2Q02086 613 aa16.32■□□□□ 0.2
SLC6A8-209ENST00000476466 TTLL4Q14679 1199 aa16.32■□□□□ 0.2
SLC6A8-209ENST00000476466 MROH7Q68CQ1 1323 aa16.32■□□□□ 0.2
SLC6A8-209ENST00000476466 C16orf59Q7L2K0 433 aa16.32■□□□□ 0.2
SLC6A8-209ENST00000476466 DHX32Q7L7V1 743 aaKnown RBP16.32■□□□□ 0.2
SLC6A8-209ENST00000476466 FANCBQ8NB91 859 aa16.32■□□□□ 0.2
SLC6A8-209ENST00000476466 VWCEQ96DN2 955 aa16.32■□□□□ 0.2
SLC6A8-209ENST00000476466 BCAS3Q9H6U6 928 aa16.32■□□□□ 0.2
SLC6A8-209ENST00000476466 TRMT13Q9NUP7 481 aaKnown RBP16.32■□□□□ 0.2
SLC6A8-209ENST00000476466 CABYRO75952 493 aa16.31■□□□□ 0.2
SLC6A8-209ENST00000476466 TIMP1P01033 207 aa16.31■□□□□ 0.2
SLC6A8-209ENST00000476466 MMP3P08254 477 aa16.31■□□□□ 0.2
SLC6A8-209ENST00000476466 MYCLP12524 364 aaPredicted RBP16.31■□□□□ 0.2
SLC6A8-209ENST00000476466 CDC27P30260 824 aa16.31■□□□□ 0.2
SLC6A8-209ENST00000476466 CYP2C18P33260 490 aa16.31■□□□□ 0.2
SLC6A8-209ENST00000476466 CPT1AP50416 773 aa16.31■□□□□ 0.2
SLC6A8-209ENST00000476466 SEMA3FQ13275 785 aa16.31■□□□□ 0.2
SLC6A8-209ENST00000476466 TYW1BQ6NUM6 668 aa16.31■□□□□ 0.2
SLC6A8-209ENST00000476466 VSIG10LQ86VR7 867 aa16.31■□□□□ 0.2
SLC6A8-209ENST00000476466 TMTC2Q8N394 836 aa16.31■□□□□ 0.2
SLC6A8-209ENST00000476466 RRP36Q96EU6 259 aaKnown RBP16.31■□□□□ 0.2
SLC6A8-209ENST00000476466 MPHOSPH6Q99547 160 aaKnown RBP16.31■□□□□ 0.2
SLC6A8-209ENST00000476466 WNT8AQ9H1J5 351 aa16.31■□□□□ 0.2
SLC6A8-209ENST00000476466 ALDH8A1Q9H2A2 487 aaPredicted RBP16.31■□□□□ 0.2
SLC6A8-209ENST00000476466 TELO2Q9Y4R8 837 aa16.31■□□□□ 0.2
SLC6A8-209ENST00000476466 VCANP13611 3396 aa16.3■□□□□ 0.2
SLC6A8-209ENST00000476466 ZEB2O60315 1214 aa16.3■□□□□ 0.2
SLC6A8-209ENST00000476466 EIF3JO75822 258 aaKnown RBP16.3■□□□□ 0.2
SLC6A8-209ENST00000476466 SMARCA1P28370 1054 aa16.3■□□□□ 0.2
SLC6A8-209ENST00000476466 NBPF20Q3BBV1 942 aa16.3■□□□□ 0.2
SLC6A8-209ENST00000476466 KAT2BQ92831 832 aa16.3■□□□□ 0.2
SLC6A8-209ENST00000476466 JAKMIP1Q96N16 626 aaKnown RBP16.3■□□□□ 0.2
SLC6A8-209ENST00000476466 CTAGE1Q96RT6 745 aa16.3■□□□□ 0.2
SLC6A8-209ENST00000476466 MTG1Q9BT17 334 aaPredicted RBP16.3■□□□□ 0.2
SLC6A8-209ENST00000476466 NOC4LQ9BVI4 516 aaKnown RBP16.3■□□□□ 0.2
SLC6A8-209ENST00000476466 POLR3EQ9NVU0 708 aa16.3■□□□□ 0.2
SLC6A8-209ENST00000476466 MRVI1Q9Y6F6 885 aa16.3■□□□□ 0.2
SLC6A8-209ENST00000476466 DOCK5Q9H7D0 1870 aa16.29■□□□□ 0.2
SLC6A8-209ENST00000476466 KLF18A0A0U1RQI7 1052 aa16.29■□□□□ 0.2
SLC6A8-209ENST00000476466 B4DLN1 442 aa16.29■□□□□ 0.2
SLC6A8-209ENST00000476466 GH1P01241 217 aa16.29■□□□□ 0.2
SLC6A8-209ENST00000476466 CALM1P0DP23 149 aa16.29■□□□□ 0.2
SLC6A8-209ENST00000476466 CALM2P0DP24 149 aa16.29■□□□□ 0.2
SLC6A8-209ENST00000476466 CALM3P0DP25 149 aa16.29■□□□□ 0.2
SLC6A8-209ENST00000476466 CYP2C9P11712 490 aa16.29■□□□□ 0.2
SLC6A8-209ENST00000476466 CSF2RAP15509 400 aa16.29■□□□□ 0.2
SLC6A8-209ENST00000476466 UBA1P22314 1058 aaKnown RBP16.29■□□□□ 0.2
SLC6A8-209ENST00000476466 GNAQP50148 359 aa16.29■□□□□ 0.2
SLC6A8-209ENST00000476466 MRPL12P52815 198 aaKnown RBP16.29■□□□□ 0.2
SLC6A8-209ENST00000476466 FPGSQ05932 587 aa16.29■□□□□ 0.2
SLC6A8-209ENST00000476466 UBE2SQ16763 222 aa16.29■□□□□ 0.2
SLC6A8-209ENST00000476466 WWC2Q6AWC2 1192 aa16.29■□□□□ 0.2
SLC6A8-209ENST00000476466 MFSD5Q6N075 450 aa16.29■□□□□ 0.2
SLC6A8-209ENST00000476466 LZTS2Q9BRK4 669 aa16.29■□□□□ 0.2
SLC6A8-209ENST00000476466 MAP3K20Q9NYL2 800 aaKnown RBP16.29■□□□□ 0.2
SLC6A8-209ENST00000476466 REV3LO60673 3130 aa16.28■□□□□ 0.2
SLC6A8-209ENST00000476466 ZNF286BP0CG31 522 aa16.28■□□□□ 0.2
SLC6A8-209ENST00000476466 ACRP10323 421 aa16.28■□□□□ 0.2
SLC6A8-209ENST00000476466 APOBRQ0VD83 1088 aa16.28■□□□□ 0.2
SLC6A8-209ENST00000476466 KRT32Q14532 448 aa16.28■□□□□ 0.2
SLC6A8-209ENST00000476466 FAM109BQ6ICB4 259 aaPredicted RBP16.28■□□□□ 0.2
SLC6A8-209ENST00000476466 SAMD3Q8N6K7 520 aa16.28■□□□□ 0.2
SLC6A8-209ENST00000476466 EMID1Q96A84 441 aaPredicted RBP16.28■□□□□ 0.2
SLC6A8-209ENST00000476466 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.28■□□□□ 0.28e-20■■■■□ 22
SLC6A8-209ENST00000476466 HIPK3Q9H422 1215 aa16.28■□□□□ 0.2
SLC6A8-209ENST00000476466 PPP4R2Q9NY27 417 aa16.28■□□□□ 0.2
SLC6A8-209ENST00000476466 SEC63Q9UGP8 760 aaKnown RBP16.28■□□□□ 0.2
SLC6A8-209ENST00000476466 MYH7BA7E2Y1 1941 aa16.27■□□□□ 0.2
SLC6A8-209ENST00000476466 GOLGA8AA7E2F4 631 aa16.27■□□□□ 0.2
SLC6A8-209ENST00000476466 GOLGA8BA8MQT2 603 aa16.27■□□□□ 0.2
SLC6A8-209ENST00000476466 PIK3CDO00329 1044 aa16.27■□□□□ 0.2
SLC6A8-209ENST00000476466 ADAMTS3O15072 1205 aa16.27■□□□□ 0.2
SLC6A8-209ENST00000476466 ZBTB43O43298 467 aa16.27■□□□□ 0.2
SLC6A8-209ENST00000476466 HOXD8P13378 290 aaPredicted RBP16.27■□□□□ 0.2
SLC6A8-209ENST00000476466 CCND2P30279 289 aa16.27■□□□□ 0.2
SLC6A8-209ENST00000476466 RTN1Q16799 776 aa16.27■□□□□ 0.2
SLC6A8-209ENST00000476466 HSDL1Q3SXM5 330 aa16.27■□□□□ 0.2
SLC6A8-209ENST00000476466 Q6ZUG5 572 aa16.27■□□□□ 0.2
SLC6A8-209ENST00000476466 INPP4AQ96PE3 977 aaPredicted RBP16.27■□□□□ 0.2
SLC6A8-209ENST00000476466 NID2Q14112 1375 aa16.26■□□□□ 0.19
SLC6A8-209ENST00000476466 SCN5AQ14524 2016 aa16.26■□□□□ 0.19
SLC6A8-209ENST00000476466 TLR3O15455 904 aaKnown RBP16.26■□□□□ 0.19
SLC6A8-209ENST00000476466 GGPS1O95749 300 aa16.26■□□□□ 0.19
SLC6A8-209ENST00000476466 RPS6KB1P23443 525 aa16.26■□□□□ 0.19
SLC6A8-209ENST00000476466 ADD1P35611 737 aaKnown RBP16.26■□□□□ 0.19
SLC6A8-209ENST00000476466 CCL23P55773 120 aa16.26■□□□□ 0.19
SLC6A8-209ENST00000476466 HIC1Q14526 733 aa16.26■□□□□ 0.19
SLC6A8-209ENST00000476466 FAM47CQ5HY64 1035 aa16.26■□□□□ 0.19
SLC6A8-209ENST00000476466 TMEM240Q5SV17 173 aa16.26■□□□□ 0.19
SLC6A8-209ENST00000476466 CELF3Q5SZQ8 465 aaKnown RBP16.26■□□□□ 0.19
SLC6A8-209ENST00000476466 MYSM1Q5VVJ2 828 aa16.26■□□□□ 0.19
SLC6A8-209ENST00000476466 HEATR3Q7Z4Q2 680 aa16.26■□□□□ 0.19
SLC6A8-209ENST00000476466 DEFB123Q8N688 67 aa16.26■□□□□ 0.19
SLC6A8-209ENST00000476466 BRF1Q92994 677 aa16.26■□□□□ 0.19
SLC6A8-209ENST00000476466 SCLYQ96I15 445 aa16.26■□□□□ 0.19
SLC6A8-209ENST00000476466 RNPC3Q96LT9 517 aaKnown RBP16.26■□□□□ 0.19
SLC6A8-209ENST00000476466 AGXT2Q9BYV1 514 aa16.26■□□□□ 0.19
SLC6A8-209ENST00000476466 RTEL1Q9NZ71 1219 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms