RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 SOS2Q07890 1332 aaPredicted RBP15.19■□□□□ 0.02
HDAC1-206ENST00000476391 NCK2O43639 380 aa15.19■□□□□ 0.02
HDAC1-206ENST00000476391 GTPBP6O43824 516 aaPredicted RBP15.19■□□□□ 0.02
HDAC1-206ENST00000476391 ZFYP08048 801 aaPredicted RBP15.19■□□□□ 0.02
HDAC1-206ENST00000476391 GIGYF2Q6Y7W6 1299 aaKnown RBP15.19■□□□□ 0.02
HDAC1-206ENST00000476391 TLCD1Q96CP7 247 aa15.19■□□□□ 0.02
HDAC1-206ENST00000476391 NOX5Q96PH1 765 aa15.19■□□□□ 0.02
HDAC1-206ENST00000476391 GPR108Q9NPR9 543 aa15.19■□□□□ 0.02
HDAC1-206ENST00000476391 ARHGEF3Q9NR81 526 aa15.19■□□□□ 0.02
HDAC1-206ENST00000476391 ADAM22Q9P0K1 906 aa15.19■□□□□ 0.02
HDAC1-206ENST00000476391 MAGEC2Q9UBF1 373 aaPredicted RBP15.19■□□□□ 0.02
HDAC1-206ENST00000476391 PLAGL2Q9UPG8 496 aa15.19■□□□□ 0.02
HDAC1-206ENST00000476391 SPDYE5A6NIY4 337 aa15.18■□□□□ 0.02
HDAC1-206ENST00000476391 IGF2BP3O00425 579 aaKnown RBP eCLIP15.18■□□□□ 0.02
HDAC1-206ENST00000476391 BMP15O95972 392 aa15.18■□□□□ 0.02
HDAC1-206ENST00000476391 IFNAR1P17181 557 aa15.18■□□□□ 0.02
HDAC1-206ENST00000476391 ADRA2BP18089 450 aa15.18■□□□□ 0.02
HDAC1-206ENST00000476391 MSH2P43246 934 aa15.18■□□□□ 0.02
HDAC1-206ENST00000476391 KIF11P52732 1056 aa15.18■□□□□ 0.02
HDAC1-206ENST00000476391 SGMS1Q86VZ5 419 aa15.18■□□□□ 0.02
HDAC1-206ENST00000476391 PRCCQ92733 491 aaPredicted RBP15.18■□□□□ 0.02
HDAC1-206ENST00000476391 NSRP1Q9H0G5 558 aaKnown RBP15.18■□□□□ 0.02
HDAC1-206ENST00000476391 RAB17Q9H0T7 212 aa15.18■□□□□ 0.02
HDAC1-206ENST00000476391 INCENPQ9NQS7 918 aa15.18■□□□□ 0.02
HDAC1-206ENST00000476391 PLEKHG1Q9ULL1 1385 aa15.18■□□□□ 0.02
HDAC1-206ENST00000476391 RAD51CO43502 376 aa15.18■□□□□ 0.02
HDAC1-206ENST00000476391 TRADDQ15628 312 aa15.18■□□□□ 0.02
HDAC1-206ENST00000476391 GALNTL6Q49A17 601 aa15.18■□□□□ 0.02
HDAC1-206ENST00000476391 KLHL29Q96CT2 875 aa15.18■□□□□ 0.02
HDAC1-206ENST00000476391 KRT23Q9C075 422 aa15.18■□□□□ 0.02
HDAC1-206ENST00000476391 CCDC134Q9H6E4 229 aa15.18■□□□□ 0.02
HDAC1-206ENST00000476391 ECT2Q9H8V3 914 aa15.18■□□□□ 0.02
HDAC1-206ENST00000476391 CTNNAL1Q9UBT7 734 aa15.18■□□□□ 0.02
HDAC1-206ENST00000476391 ANAPC4Q9UJX5 808 aa15.18■□□□□ 0.02
HDAC1-206ENST00000476391 TRIM75PA6NK02 468 aa15.17■□□□□ 0.02
HDAC1-206ENST00000476391 HIP1RO75146 1068 aa15.17■□□□□ 0.02
HDAC1-206ENST00000476391 IFIT1P09914 478 aaKnown RBP15.17■□□□□ 0.02
HDAC1-206ENST00000476391 ATP6V1C1P21283 382 aa15.17■□□□□ 0.02
HDAC1-206ENST00000476391 PRCPP42785 496 aa15.17■□□□□ 0.02
HDAC1-206ENST00000476391 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.17■□□□□ 0.02
HDAC1-206ENST00000476391 TRAPPC9Q96Q05 1148 aa15.17■□□□□ 0.02
HDAC1-206ENST00000476391 PIDD1Q9HB75 910 aa15.17■□□□□ 0.02
HDAC1-206ENST00000476391 HEG1Q9ULI3 1381 aa15.17■□□□□ 0.02
HDAC1-206ENST00000476391 SART1O43290 800 aaKnown RBP15.17■□□□□ 0.02
HDAC1-206ENST00000476391 UBOX5O94941 541 aa15.17■□□□□ 0.02
HDAC1-206ENST00000476391 KRT16P08779 473 aa15.17■□□□□ 0.02
HDAC1-206ENST00000476391 EIF3BP55884 814 aaKnown RBP15.17■□□□□ 0.02
HDAC1-206ENST00000476391 ADAM9Q13443 819 aa15.17■□□□□ 0.02
HDAC1-206ENST00000476391 KRT71Q3SY84 523 aa15.17■□□□□ 0.02
HDAC1-206ENST00000476391 RRP12Q5JTH9 1297 aaKnown RBP15.17■□□□□ 0.02
HDAC1-206ENST00000476391 RIC3Q7Z5B4 369 aa15.17■□□□□ 0.02
HDAC1-206ENST00000476391 C14orf37Q86TY3 774 aa15.17■□□□□ 0.02
HDAC1-206ENST00000476391 TRIM22Q8IYM9 498 aa15.17■□□□□ 0.02
HDAC1-206ENST00000476391 LGR6Q9HBX8 967 aa15.17■□□□□ 0.02
HDAC1-206ENST00000476391 DDX21Q9NR30 783 aaKnown RBP eCLIP15.17■□□□□ 0.02
HDAC1-206ENST00000476391 KCNJ14Q9UNX9 436 aa15.17■□□□□ 0.02
HDAC1-206ENST00000476391 DISP2A7MBM2 1401 aa15.17■□□□□ 0.02
HDAC1-206ENST00000476391 DCDC2CA8MYV0 355 aa15.16■□□□□ 0.02
HDAC1-206ENST00000476391 MMEP08473 750 aa15.16■□□□□ 0.02
HDAC1-206ENST00000476391 GBP1P32455 592 aa15.16■□□□□ 0.02
HDAC1-206ENST00000476391 COPS2P61201 443 aa15.16■□□□□ 0.02
HDAC1-206ENST00000476391 ERVK-9P63128 1117 aa15.16■□□□□ 0.02
HDAC1-206ENST00000476391 PPARDQ03181 441 aa15.16■□□□□ 0.02
HDAC1-206ENST00000476391 KLC1Q07866 573 aa15.16■□□□□ 0.02
HDAC1-206ENST00000476391 BNIP1Q12981 228 aa15.16■□□□□ 0.02
HDAC1-206ENST00000476391 TRIM68Q6AZZ1 485 aa15.16■□□□□ 0.02
HDAC1-206ENST00000476391 ADSSL1Q8N142 457 aa15.16■□□□□ 0.02
HDAC1-206ENST00000476391 ZNF526Q8TF50 670 aaPredicted RBP15.16■□□□□ 0.02
HDAC1-206ENST00000476391 UBLCP1Q8WVY7 318 aaPredicted RBP15.16■□□□□ 0.02
HDAC1-206ENST00000476391 NEUROD6Q96NK8 337 aa15.16■□□□□ 0.02
HDAC1-206ENST00000476391 INPP4AQ96PE3 977 aaPredicted RBP15.16■□□□□ 0.02
HDAC1-206ENST00000476391 SYT15Q9BQS2 421 aa15.16■□□□□ 0.02
HDAC1-206ENST00000476391 BLZF1Q9H2G9 400 aa15.16■□□□□ 0.02
HDAC1-206ENST00000476391 VCXQ9H320 206 aa15.16■□□□□ 0.02
HDAC1-206ENST00000476391 ARHGEF10LQ9HCE6 1279 aa15.16■□□□□ 0.02
HDAC1-206ENST00000476391 ABCF3Q9NUQ8 709 aa15.16■□□□□ 0.02
HDAC1-206ENST00000476391 ARHGAP20Q9P2F6 1191 aa15.16■□□□□ 0.02
HDAC1-206ENST00000476391 TMEM59LQ9UK28 342 aa15.16■□□□□ 0.02
HDAC1-206ENST00000476391 BLOC1S6Q9UL45 172 aa15.16■□□□□ 0.02
HDAC1-206ENST00000476391 MYH1P12882 1939 aa15.16■□□□□ 0.02
HDAC1-206ENST00000476391 NRXN3Q9Y4C0 1643 aa15.16■□□□□ 0.02
HDAC1-206ENST00000476391 BHMG1C9JSJ3 638 aaPredicted RBP15.16■□□□□ 0.02
HDAC1-206ENST00000476391 GNAZP19086 355 aa15.16■□□□□ 0.02
HDAC1-206ENST00000476391 MAGEA1P43355 309 aa15.16■□□□□ 0.02
HDAC1-206ENST00000476391 USP4Q13107 963 aa15.16■□□□□ 0.02
HDAC1-206ENST00000476391 NR5A1Q13285 461 aa15.16■□□□□ 0.02
HDAC1-206ENST00000476391 SPDYCQ5MJ68 293 aa15.16■□□□□ 0.02
HDAC1-206ENST00000476391 CYB5R4Q7L1T6 521 aa15.16■□□□□ 0.02
HDAC1-206ENST00000476391 ATXN2LQ8WWM7 1075 aaKnown RBP15.16■□□□□ 0.02
HDAC1-206ENST00000476391 PBKQ96KB5 322 aa15.16■□□□□ 0.02
HDAC1-206ENST00000476391 TUBGCP2Q9BSJ2 902 aa15.16■□□□□ 0.02
HDAC1-206ENST00000476391 CABP5Q9NP86 173 aa15.16■□□□□ 0.02
HDAC1-206ENST00000476391 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.16■□□□□ 0.02
HDAC1-206ENST00000476391 FBXL5Q9UKA1 691 aa15.16■□□□□ 0.02
HDAC1-206ENST00000476391 UBE2Q2LH0YL09 131 aa15.15■□□□□ 0.02
HDAC1-206ENST00000476391 CREB3O43889 395 aa15.15■□□□□ 0.02
HDAC1-206ENST00000476391 AKR1B10O60218 316 aa15.15■□□□□ 0.02
HDAC1-206ENST00000476391 BAG3O95817 575 aa15.15■□□□□ 0.02
HDAC1-206ENST00000476391 RPN1P04843 607 aaKnown RBP15.15■□□□□ 0.02
HDAC1-206ENST00000476391 PLEKP08567 350 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms