RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 UNC13DQ70J99 1090 aa17.83■□□□□ 0.44
VARS2-207ENST00000476162 ACRBPQ8NEB7 543 aa17.83■□□□□ 0.44
VARS2-207ENST00000476162 PRMT6Q96LA8 375 aaPredicted RBP17.83■□□□□ 0.44
VARS2-207ENST00000476162 UIMC1Q96RL1 719 aa17.83■□□□□ 0.44
VARS2-207ENST00000476162 CARD6Q9BX69 1037 aa17.83■□□□□ 0.44
VARS2-207ENST00000476162 SEMA6BQ9H3T3 888 aa17.83■□□□□ 0.44
VARS2-207ENST00000476162 PCDHA12Q9UN75 941 aa17.83■□□□□ 0.44
VARS2-207ENST00000476162 PVALEFA0A1B0GWK0 134 aa17.82■□□□□ 0.44
VARS2-207ENST00000476162 MMP14P50281 582 aa17.82■□□□□ 0.44
VARS2-207ENST00000476162 DNM2P50570 870 aa17.82■□□□□ 0.44
VARS2-207ENST00000476162 SNAP25P60880 206 aa17.82■□□□□ 0.44
VARS2-207ENST00000476162 JAG1P78504 1218 aa17.82■□□□□ 0.44
VARS2-207ENST00000476162 COBLL1Q53SF7 1204 aa17.82■□□□□ 0.44
VARS2-207ENST00000476162 CNOT6LQ96LI5 555 aaKnown RBP17.82■□□□□ 0.44
VARS2-207ENST00000476162 YDJCA8MPS7 323 aa17.82■□□□□ 0.44
VARS2-207ENST00000476162 MAP3K9P80192 1104 aa17.82■□□□□ 0.44
VARS2-207ENST00000476162 MUM1L1Q5H9M0 696 aa17.82■□□□□ 0.44
VARS2-207ENST00000476162 MNS1Q8NEH6 495 aa17.82■□□□□ 0.44
VARS2-207ENST00000476162 DDX12PQ92771 950 aa17.82■□□□□ 0.44
VARS2-207ENST00000476162 GLT8D2Q9H1C3 349 aa17.82■□□□□ 0.44
VARS2-207ENST00000476162 RSPH14Q9UHP6 348 aa17.82■□□□□ 0.44
VARS2-207ENST00000476162 MYH7BA7E2Y1 1941 aa17.81■□□□□ 0.44
VARS2-207ENST00000476162 IDEP14735 1019 aa17.81■□□□□ 0.44
VARS2-207ENST00000476162 RXRBP28702 533 aa17.81■□□□□ 0.44
VARS2-207ENST00000476162 TNNT3P45378 269 aaPredicted RBP17.81■□□□□ 0.44
VARS2-207ENST00000476162 CENPPQ6IPU0 288 aa17.81■□□□□ 0.44
VARS2-207ENST00000476162 CHP1Q99653 195 aa17.81■□□□□ 0.44
VARS2-207ENST00000476162 PPIP5K2O43314 1243 aa17.8■□□□□ 0.44
VARS2-207ENST00000476162 C21orf2O43822 256 aa17.8■□□□□ 0.44
VARS2-207ENST00000476162 NDUFB10O96000 172 aa17.8■□□□□ 0.44
VARS2-207ENST00000476162 GH2P01242 217 aa17.8■□□□□ 0.44
VARS2-207ENST00000476162 SLC15A2Q16348 729 aa17.8■□□□□ 0.44
VARS2-207ENST00000476162 FAM114A1Q8IWE2 563 aa17.8■□□□□ 0.44
VARS2-207ENST00000476162 OR8K1Q8NGG5 319 aa17.8■□□□□ 0.44
VARS2-207ENST00000476162 ANO3Q9BYT9 981 aa17.8■□□□□ 0.44
VARS2-207ENST00000476162 RASSF4Q9H2L5 321 aa17.8■□□□□ 0.44
VARS2-207ENST00000476162 LUC7L2Q9Y383 392 aaKnown RBP17.8■□□□□ 0.44
VARS2-207ENST00000476162 ZNF646O15015 1829 aaPredicted RBP17.8■□□□□ 0.44
VARS2-207ENST00000476162 MEIS2O14770 477 aa17.8■□□□□ 0.44
VARS2-207ENST00000476162 NKRFO15226 690 aaKnown RBP eCLIP17.8■□□□□ 0.44
VARS2-207ENST00000476162 KIF5CO60282 957 aa17.8■□□□□ 0.44
VARS2-207ENST00000476162 ENTPD3O75355 529 aa17.8■□□□□ 0.44
VARS2-207ENST00000476162 MTIF2P46199 727 aaKnown RBP17.8■□□□□ 0.44
VARS2-207ENST00000476162 TBC1D8BQ0IIM8 1120 aa17.8■□□□□ 0.44
VARS2-207ENST00000476162 RRP1BQ14684 758 aaKnown RBP17.8■□□□□ 0.44
VARS2-207ENST00000476162 GMCL1P1Q8NEA9 526 aa17.8■□□□□ 0.44
VARS2-207ENST00000476162 CAPN11Q9UMQ6 739 aa17.8■□□□□ 0.44
VARS2-207ENST00000476162 MRFAP1Q9Y605 127 aa17.8■□□□□ 0.44
VARS2-207ENST00000476162 FHOD1Q9Y613 1164 aa17.8■□□□□ 0.44
VARS2-207ENST00000476162 ATRNL1Q5VV63 1379 aa17.8■□□□□ 0.44
VARS2-207ENST00000476162 H2AFXP16104 143 aaPredicted RBP17.79■□□□□ 0.44
VARS2-207ENST00000476162 USP11P51784 963 aa17.79■□□□□ 0.44
VARS2-207ENST00000476162 IKQ13123 557 aaPredicted RBP17.79■□□□□ 0.44
VARS2-207ENST00000476162 ARHGAP29Q52LW3 1261 aa17.79■□□□□ 0.44
VARS2-207ENST00000476162 RBM26Q5T8P6 1007 aaKnown RBP17.79■□□□□ 0.44
VARS2-207ENST00000476162 UBXN4Q92575 508 aa17.79■□□□□ 0.44
VARS2-207ENST00000476162 GMCL1Q96IK5 515 aa17.79■□□□□ 0.44
VARS2-207ENST00000476162 CSRNP1Q96S65 589 aa17.79■□□□□ 0.44
VARS2-207ENST00000476162 NAP1L4Q99733 375 aaKnown RBP17.79■□□□□ 0.44
VARS2-207ENST00000476162 NOC4LQ9BVI4 516 aaKnown RBP17.79■□□□□ 0.44
VARS2-207ENST00000476162 TADA3O75528 432 aa17.79■□□□□ 0.44
VARS2-207ENST00000476162 ABL1P00519 1130 aa17.79■□□□□ 0.44
VARS2-207ENST00000476162 KLK7P49862 253 aa17.79■□□□□ 0.44
VARS2-207ENST00000476162 MIIPQ5JXC2 388 aa17.79■□□□□ 0.44
VARS2-207ENST00000476162 CC2D2BQ6DHV5 1058 aa17.79■□□□□ 0.44
VARS2-207ENST00000476162 P2RX7Q99572 595 aaKnown RBP17.79■□□□□ 0.44
VARS2-207ENST00000476162 DNAJC7Q99615 494 aa17.79■□□□□ 0.44
VARS2-207ENST00000476162 SLF1Q9BQI6 1058 aa17.79■□□□□ 0.44
VARS2-207ENST00000476162 AMNQ9BXJ7 453 aa17.79■□□□□ 0.44
VARS2-207ENST00000476162 LRRC27Q9C0I9 530 aa17.79■□□□□ 0.44
VARS2-207ENST00000476162 RASSF10A6NK89 507 aa17.78■□□□□ 0.44
VARS2-207ENST00000476162 EZH2Q15910 746 aaKnown RBP17.78■□□□□ 0.44
VARS2-207ENST00000476162 USH1GQ495M9 461 aa17.78■□□□□ 0.44
VARS2-207ENST00000476162 GUF1Q8N442 669 aaKnown RBP17.78■□□□□ 0.44
VARS2-207ENST00000476162 GLIS3Q8NEA6 775 aa17.78■□□□□ 0.44
VARS2-207ENST00000476162 SUPT20HQ8NEM7 779 aa17.78■□□□□ 0.44
VARS2-207ENST00000476162 KCNMB3Q9NPA1 279 aa17.78■□□□□ 0.44
VARS2-207ENST00000476162 EFCAB8A8MWE9 144 aa17.78■□□□□ 0.44
VARS2-207ENST00000476162 TRIM21P19474 475 aaKnown RBP17.78■□□□□ 0.44
VARS2-207ENST00000476162 EHHADHQ08426 723 aa17.78■□□□□ 0.44
VARS2-207ENST00000476162 ZNF569Q5MCW4 686 aa17.78■□□□□ 0.44
VARS2-207ENST00000476162 FBXO11Q86XK2 927 aa17.78■□□□□ 0.44
VARS2-207ENST00000476162 AGPAT5Q9NUQ2 364 aa17.78■□□□□ 0.44
VARS2-207ENST00000476162 EPN1Q9Y6I3 576 aaPredicted RBP17.78■□□□□ 0.44
VARS2-207ENST00000476162 CYP3A7-CYP3A51PA0A087WV96 503 aa17.77■□□□□ 0.44
VARS2-207ENST00000476162 A0A1W2PRG0 241 aa17.77■□□□□ 0.44
VARS2-207ENST00000476162 SSBP05455 408 aaKnown RBP eCLIP17.77■□□□□ 0.44
VARS2-207ENST00000476162 CYP3A7P24462 503 aa17.77■□□□□ 0.44
VARS2-207ENST00000476162 PLA2G4AP47712 749 aa17.77■□□□□ 0.44
VARS2-207ENST00000476162 PPP2R3AQ06190 1150 aa17.77■□□□□ 0.44
VARS2-207ENST00000476162 AP3B2Q13367 1082 aa17.77■□□□□ 0.44
VARS2-207ENST00000476162 LRRC41Q15345 812 aa17.77■□□□□ 0.44
VARS2-207ENST00000476162 HYIQ5T013 277 aa17.77■□□□□ 0.44
VARS2-207ENST00000476162 SYDE2Q5VT97 1194 aa17.77■□□□□ 0.44
VARS2-207ENST00000476162 WDR59Q6PJI9 974 aa17.77■□□□□ 0.44
VARS2-207ENST00000476162 DNAJC19Q96DA6 116 aa17.77■□□□□ 0.44
VARS2-207ENST00000476162 TTYH3Q9C0H2 523 aa17.77■□□□□ 0.44
VARS2-207ENST00000476162 KIAA1024Q9UPX6 916 aa17.77■□□□□ 0.44
VARS2-207ENST00000476162 TCP10L2B9ZVM9 353 aa17.76■□□□□ 0.43
VARS2-207ENST00000476162 E9PMD0 336 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms