RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 SETQ01105 290 aaPredicted RBP15.48■□□□□ 0.07
TRAF4-210ENST00000475329 MOGSQ13724 837 aa15.48■□□□□ 0.07
TRAF4-210ENST00000475329 PLS1Q14651 629 aa15.48■□□□□ 0.07
TRAF4-210ENST00000475329 RRAGBQ5VZM2 374 aa15.48■□□□□ 0.07
TRAF4-210ENST00000475329 PDXDC2PQ6P474 469 aa15.48■□□□□ 0.07
TRAF4-210ENST00000475329 NSMFQ6X4W1 530 aa15.48■□□□□ 0.07
TRAF4-210ENST00000475329 SLC30A10Q6XR72 485 aa15.48■□□□□ 0.07
TRAF4-210ENST00000475329 LBX2Q6XYB7 198 aa15.48■□□□□ 0.07
TRAF4-210ENST00000475329 FAM200AQ8TCP9 573 aa15.48■□□□□ 0.07
TRAF4-210ENST00000475329 SYTL5Q8TDW5 730 aaPredicted RBP15.48■□□□□ 0.07
TRAF4-210ENST00000475329 LENG9Q96B70 501 aa15.48■□□□□ 0.07
TRAF4-210ENST00000475329 CALML4Q96GE6 196 aa15.48■□□□□ 0.07
TRAF4-210ENST00000475329 FAM20AQ96MK3 541 aa15.48■□□□□ 0.07
TRAF4-210ENST00000475329 ASCC2Q9H1I8 757 aaPredicted RBP15.48■□□□□ 0.07
TRAF4-210ENST00000475329 CUEDC2Q9H467 287 aa15.48■□□□□ 0.07
TRAF4-210ENST00000475329 MAGEF1Q9HAY2 307 aa15.48■□□□□ 0.07
TRAF4-210ENST00000475329 COL20A1Q9P218 1284 aa15.48■□□□□ 0.07
TRAF4-210ENST00000475329 PCDHA12Q9UN75 941 aa15.48■□□□□ 0.07
TRAF4-210ENST00000475329 RIPK3Q9Y572 518 aa15.48■□□□□ 0.07
TRAF4-210ENST00000475329 IGLV3-22A0A075B6J6 115 aa15.47■□□□□ 0.07
TRAF4-210ENST00000475329 POTEMA6NI47 508 aa15.47■□□□□ 0.07
TRAF4-210ENST00000475329 FOXN1O15353 648 aa15.47■□□□□ 0.07
TRAF4-210ENST00000475329 SLC26A4O43511 780 aa15.47■□□□□ 0.07
TRAF4-210ENST00000475329 SMC2O95347 1197 aa15.47■□□□□ 0.07
TRAF4-210ENST00000475329 PRR29P0C7W0 189 aa15.47■□□□□ 0.07
TRAF4-210ENST00000475329 NLRP12P59046 1061 aa15.47■□□□□ 0.07
TRAF4-210ENST00000475329 UBXN2AP68543 259 aa15.47■□□□□ 0.07
TRAF4-210ENST00000475329 UVSSAQ2YD98 709 aa15.47■□□□□ 0.07
TRAF4-210ENST00000475329 KRT79Q5XKE5 535 aa15.47■□□□□ 0.07
TRAF4-210ENST00000475329 CHADLQ6NUI6 762 aa15.47■□□□□ 0.07
TRAF4-210ENST00000475329 SH3RF1Q7Z6J0 888 aa15.47■□□□□ 0.07
TRAF4-210ENST00000475329 GRAMD1CQ8IYS0 662 aa15.47■□□□□ 0.07
TRAF4-210ENST00000475329 CHST13Q8NET6 341 aa15.47■□□□□ 0.07
TRAF4-210ENST00000475329 SMARCE1Q969G3 411 aa15.47■□□□□ 0.07
TRAF4-210ENST00000475329 PAGE5Q96GU1 130 aa15.47■□□□□ 0.07
TRAF4-210ENST00000475329 CDK5RAP3Q96JB5 506 aa15.47■□□□□ 0.07
TRAF4-210ENST00000475329 DNAJC25Q9H1X3 360 aa15.47■□□□□ 0.07
TRAF4-210ENST00000475329 PLCG1P19174 1290 aa15.46■□□□□ 0.07
TRAF4-210ENST00000475329 AFMP43652 599 aa15.46■□□□□ 0.07
TRAF4-210ENST00000475329 HERVK_113P62684 666 aa15.46■□□□□ 0.07
TRAF4-210ENST00000475329 CEP55Q53EZ4 464 aa15.46■□□□□ 0.07
TRAF4-210ENST00000475329 PCNX4Q63HM2 1172 aa15.46■□□□□ 0.07
TRAF4-210ENST00000475329 GPAT2Q6NUI2 795 aa15.46■□□□□ 0.07
TRAF4-210ENST00000475329 NIPA1Q7RTP0 329 aa15.46■□□□□ 0.07
TRAF4-210ENST00000475329 PLA2G4DQ86XP0 818 aa15.46■□□□□ 0.07
TRAF4-210ENST00000475329 RIOX2Q8IUF8 465 aa15.46■□□□□ 0.07
TRAF4-210ENST00000475329 SNX29Q8TEQ0 813 aa15.46■□□□□ 0.07
TRAF4-210ENST00000475329 MMTAG2Q9BU76 263 aaKnown RBP15.46■□□□□ 0.07
TRAF4-210ENST00000475329 NAT10Q9H0A0 1025 aaKnown RBP15.46■□□□□ 0.07
TRAF4-210ENST00000475329 FBXO40Q9UH90 709 aa15.46■□□□□ 0.07
TRAF4-210ENST00000475329 PCDHA5Q9Y5H7 936 aa15.46■□□□□ 0.07
TRAF4-210ENST00000475329 ZNFX1Q9P2E3 1918 aaKnown RBP15.46■□□□□ 0.07
TRAF4-210ENST00000475329 LRRC37A2A6NM11 1700 aa15.46■□□□□ 0.06
TRAF4-210ENST00000475329 KDM3AQ9Y4C1 1321 aa15.45■□□□□ 0.06
TRAF4-210ENST00000475329 PLXNB2O15031 1838 aa15.45■□□□□ 0.06
TRAF4-210ENST00000475329 BIN1O00499 593 aa15.45■□□□□ 0.06
TRAF4-210ENST00000475329 MSH4O15457 936 aa15.45■□□□□ 0.06
TRAF4-210ENST00000475329 GTPBP6O43824 516 aaPredicted RBP15.45■□□□□ 0.06
TRAF4-210ENST00000475329 CETPP11597 493 aa15.45■□□□□ 0.06
TRAF4-210ENST00000475329 ZNF165P49910 485 aa15.45■□□□□ 0.06
TRAF4-210ENST00000475329 GTF2A2P52657 109 aa15.45■□□□□ 0.06
TRAF4-210ENST00000475329 BAATQ14032 418 aaPredicted RBP15.45■□□□□ 0.06
TRAF4-210ENST00000475329 NAALADL2Q58DX5 795 aa15.45■□□□□ 0.06
TRAF4-210ENST00000475329 NT5DC1Q5TFE4 455 aa15.45■□□□□ 0.06
TRAF4-210ENST00000475329 C11orf57Q6ZUT1 292 aaPredicted RBP15.45■□□□□ 0.06
TRAF4-210ENST00000475329 TRIML1Q8N9V2 468 aa15.45■□□□□ 0.06
TRAF4-210ENST00000475329 ANP32BQ92688 251 aaKnown RBP15.45■□□□□ 0.06
TRAF4-210ENST00000475329 GJA10Q969M2 543 aa15.45■□□□□ 0.06
TRAF4-210ENST00000475329 TAAR1Q96RJ0 339 aa15.45■□□□□ 0.06
TRAF4-210ENST00000475329 RMDN3Q96TC7 470 aa15.45■□□□□ 0.06
TRAF4-210ENST00000475329 MXRA8Q9BRK3 442 aa15.45■□□□□ 0.06
TRAF4-210ENST00000475329 CBX8Q9HC52 389 aa15.45■□□□□ 0.06
TRAF4-210ENST00000475329 PXMP2Q9NR77 195 aa15.45■□□□□ 0.06
TRAF4-210ENST00000475329 BTBD7Q9P203 1132 aa15.45■□□□□ 0.06
TRAF4-210ENST00000475329 STK17AQ9UEE5 414 aa15.45■□□□□ 0.06
TRAF4-210ENST00000475329 PNMA3Q9UL41 463 aa15.45■□□□□ 0.06
TRAF4-210ENST00000475329 STK24Q9Y6E0 443 aa15.45■□□□□ 0.06
TRAF4-210ENST00000475329 COPB2P35606 906 aa15.44■□□□□ 0.06
TRAF4-210ENST00000475329 DPYDQ12882 1025 aa15.44■□□□□ 0.06
TRAF4-210ENST00000475329 GRB10Q13322 594 aa15.44■□□□□ 0.06
TRAF4-210ENST00000475329 PGM5Q15124 567 aa15.44■□□□□ 0.06
TRAF4-210ENST00000475329 DPCR1Q3MIW9 517 aa15.44■□□□□ 0.06
TRAF4-210ENST00000475329 ARHGEF16Q5VV41 709 aa15.44■□□□□ 0.06
TRAF4-210ENST00000475329 IL31RAQ8NI17 732 aa15.44■□□□□ 0.06
TRAF4-210ENST00000475329 ERMNQ8TAM6 284 aa15.44■□□□□ 0.06
TRAF4-210ENST00000475329 CYP2W1Q8TAV3 490 aa15.44■□□□□ 0.06
TRAF4-210ENST00000475329 GTF3C2Q8WUA4 911 aaPredicted RBP15.44■□□□□ 0.06
TRAF4-210ENST00000475329 SLC5A5Q92911 643 aa15.44■□□□□ 0.06
TRAF4-210ENST00000475329 PLIN2Q99541 437 aa15.44■□□□□ 0.06
TRAF4-210ENST00000475329 PAGR1Q9BTK6 254 aa15.44■□□□□ 0.06
TRAF4-210ENST00000475329 SPATC1LQ9H0A9 340 aa15.44■□□□□ 0.06
TRAF4-210ENST00000475329 A1CFQ9NQ94 594 aaKnown RBP15.44■□□□□ 0.06
TRAF4-210ENST00000475329 MAN1B1Q9UKM7 699 aa15.44■□□□□ 0.06
TRAF4-210ENST00000475329 WDR81Q562E7 1941 aa15.44■□□□□ 0.06
TRAF4-210ENST00000475329 PFASO15067 1338 aa15.43■□□□□ 0.06
TRAF4-210ENST00000475329 A0A087WWV3 80 aa15.43■□□□□ 0.06
TRAF4-210ENST00000475329 MEIS1O00470 390 aa15.43■□□□□ 0.06
TRAF4-210ENST00000475329 CNMDO75829 334 aa15.43■□□□□ 0.06
TRAF4-210ENST00000475329 ITGBL1O95965 494 aaPredicted RBP15.43■□□□□ 0.06
TRAF4-210ENST00000475329 MYL1P05976 194 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms