RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 CRTC2Q53ET0 693 aaPredicted RBP6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 FAM102BQ5T8I3 360 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 DIEXFQ68CQ4 756 aaKnown RBP6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 SAPCD2Q86UD0 394 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 KRT222Q8N1A0 295 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 TAB3Q8N5C8 712 aaPredicted RBP6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 MGARPQ8TDB4 240 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 BICD1Q96G01 975 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 TAOK3Q9H2K8 898 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 ZNF408Q9H9D4 720 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 AIPL1Q9NZN9 384 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 TBC1D7Q9P0N9 293 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 SPATA7Q9P0W8 599 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 NOB1Q9ULX3 412 aaKnown RBP6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 KIAA1551Q9HCM1 1747 aa6.84□□□□□ -1.31
SMARCE1-208ENST00000474246 FERP16591 822 aa6.84□□□□□ -1.31
SMARCE1-208ENST00000474246 CCT5P48643 541 aa6.84□□□□□ -1.31
SMARCE1-208ENST00000474246 CTDSPL2Q05D32 466 aa6.84□□□□□ -1.31
SMARCE1-208ENST00000474246 ADCY2Q08462 1091 aa6.84□□□□□ -1.31
SMARCE1-208ENST00000474246 SHROOM1Q2M3G4 852 aaPredicted RBP6.84□□□□□ -1.31
SMARCE1-208ENST00000474246 RNF20Q5VTR2 975 aa6.84□□□□□ -1.31
SMARCE1-208ENST00000474246 MAP1SQ66K74 1059 aaPredicted RBP6.84□□□□□ -1.31
SMARCE1-208ENST00000474246 TTC19Q6DKK2 380 aaPredicted RBP6.84□□□□□ -1.31
SMARCE1-208ENST00000474246 FAM180BQ6P0A1 224 aa6.84□□□□□ -1.31
SMARCE1-208ENST00000474246 TOGARAM2Q6ZUX3 1019 aa6.84□□□□□ -1.31
SMARCE1-208ENST00000474246 NLRP14Q86W24 1093 aa6.84□□□□□ -1.31
SMARCE1-208ENST00000474246 C7orf61Q8IZ16 206 aa6.84□□□□□ -1.31
SMARCE1-208ENST00000474246 RBM18Q96H35 190 aaKnown RBP6.84□□□□□ -1.31
SMARCE1-208ENST00000474246 HIC2Q96JB3 615 aa6.84□□□□□ -1.31
SMARCE1-208ENST00000474246 CLMNQ96JQ2 1002 aa6.84□□□□□ -1.31
SMARCE1-208ENST00000474246 ALPK1Q96QP1 1244 aa6.84□□□□□ -1.31
SMARCE1-208ENST00000474246 SRA1Q9HD15 236 aaKnown RBP6.84□□□□□ -1.31
SMARCE1-208ENST00000474246 NEUROD4Q9HD90 331 aa6.84□□□□□ -1.31
SMARCE1-208ENST00000474246 DISC1Q9NRI5 854 aa6.84□□□□□ -1.31
SMARCE1-208ENST00000474246 CHMP5Q9NZZ3 219 aa6.84□□□□□ -1.31
SMARCE1-208ENST00000474246 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.84□□□□□ -1.31
SMARCE1-208ENST00000474246 NSD3Q9BZ95 1437 aa6.84□□□□□ -1.31
SMARCE1-208ENST00000474246 N4BP2Q86UW6 1770 aaPredicted RBP6.84□□□□□ -1.32
SMARCE1-208ENST00000474246 SASH1O94885 1247 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 CNOT4O95628 575 aaKnown RBP6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 FGFR1OPO95684 399 aaKnown RBP6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 MYBL2P10244 700 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 MTHFD1P11586 935 aaKnown RBP6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 CAPN3P20807 821 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 GALNSP34059 522 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 KRT20P35900 424 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 PDE6CP51160 858 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 ELF2Q15723 593 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 ANKRD39Q53RE8 183 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 BLOC1S3Q6QNY0 202 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 THSD4Q6ZMP0 1018 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 RNF19BQ6ZMZ0 732 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 TMC7Q7Z402 723 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 CCDC91Q7Z6B0 441 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 CEP57L1Q8IYX8 460 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 MAGEB6Q8N7X4 407 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 LSMEM1Q8N8F7 131 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 MSANTD4Q8NCY6 345 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 RASSF8Q8NHQ8 419 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 TNPO1Q92973 898 aaKnown RBP6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 PRIMPOLQ96LW4 560 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 GUCD1Q96NT3 240 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 HTATIP2Q9BUP3 242 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 SARGQ9BW04 601 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 NLRC4Q9NPP4 1024 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 RRAGDQ9NQL2 400 aaPredicted RBP6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 KCNQ5Q9NR82 932 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 BLOC1S4Q9NUP1 217 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 MCM8Q9UJA3 840 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 TRAF3IP3Q9Y228 551 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 PCDHB3Q9Y5E6 796 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 SYNJ2BP-COX16A0A087WUM0 186 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 SYNDIG1LA6NDD5 238 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 PRPF3O43395 683 aaKnown RBP6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 KLHL41O60662 606 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 NOP2P46087 812 aaKnown RBP6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 KIF11P52732 1056 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 LIMK1P53667 647 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 NUCB2P80303 420 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 AKAP17AQ02040 695 aaKnown RBP6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 PIN1Q13526 163 aaPredicted RBP6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 TMCO3Q6UWJ1 677 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 EFCAB13Q8IY85 973 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 RTKN2Q8IZC4 609 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 FAM76AQ8TAV0 307 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 FNIP1Q8TF40 1166 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 PRR14Q9BWN1 585 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 YIPF2Q9BWQ6 316 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 SLC13A1Q9BZW2 595 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 NCOA5Q9HCD5 579 aaKnown RBP6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 HACL1Q9UJ83 578 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 CCNL1Q9UK58 526 aaPredicted RBP6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 ATRXP46100 2492 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 TIAM2Q8IVF5 1701 aa6.83□□□□□ -1.32
SMARCE1-208ENST00000474246 IRS2Q9Y4H2 1338 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 TSPY2A6NKD2 308 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 H0YC42 278 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 TADA3O75528 432 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 SLC4A1P02730 911 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms