RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 AGMOQ6ZNB7 445 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 FCHSD1Q86WN1 690 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 ITPRIPQ8IWB1 547 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 TRIM58Q8NG06 486 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 ATL2Q8NHH9 583 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 CCDC47Q96A33 483 aaKnown RBP5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 CLIC6Q96NY7 704 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 PAGR1Q9BTK6 254 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 NT5C1AQ9BXI3 368 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 INCENPQ9NQS7 918 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 DDX19AQ9NUU7 478 aaKnown RBP5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 KLF15Q9UIH9 416 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 ASXL1Q8IXJ9 1541 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 GOLGA6L9A6NEM1 432 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 ENO4A6NNW6 628 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 RAPGEF3O95398 923 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 PCBP4P57723 403 aaKnown RBP5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 MIS18BP1Q6P0N0 1132 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 MTHFD1LQ6UB35 978 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 ADAMTSL4Q6UY14 1074 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 MSANTD4Q8NCY6 345 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 BSNDQ8WZ55 320 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 MMADHCQ9H3L0 296 aaPredicted RBP5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 VCPKMTQ9H867 229 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 PCDHGC5Q9Y5F6 944 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 TNRQ92752 1358 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 TCHHQ07283 1943 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 MST1RQ04912 1400 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 GOLGA6L7A0A1B0GV03 622 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 SMNDC1O75940 238 aaKnown RBP eCLIP5.75□□□□□ -1.493e-7■■■■■ 44.6
TMEM39A-206ENST00000473684 PF4P02776 101 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 NAT1P18440 290 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 NEK4P51957 841 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 RPS26P62854 115 aaKnown RBP5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 LMNB2Q03252 620 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 CCDC57Q2TAC2 916 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 CCDC181Q5TID7 509 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 TTBK2Q6IQ55 1244 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 ATF7IPQ6VMQ6 1270 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 FAM35AQ86V20 835 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 TAX1BP1Q86VP1 789 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 CEP57Q86XR8 500 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 FAM177A1Q8N128 213 aaPredicted RBP5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 ZCRB1Q8TBF4 217 aaKnown RBP5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 SMARCC1Q92922 1105 aaPredicted RBP5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 IL17RAQ96F46 866 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 MDFIQ99750 246 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 YIPF2Q9BWQ6 316 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 TNMDQ9H2S6 317 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 PLEKHA4Q9H4M7 779 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 GGA2Q9UJY4 613 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 SLC6A14Q9UN76 642 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 MRFAP1Q9Y605 127 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 CDC42BPGQ6DT37 1551 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 TRPM1Q7Z4N2 1603 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 FRMD3A2A2Y4 597 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 SKAP2O75563 359 aaPredicted RBP5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 CPB1P15086 417 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 TFE3P19532 575 aaPredicted RBP5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 ZBED6P86452 979 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 FAM160A1Q05DH4 1040 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 CAMK2GQ13555 558 aaPredicted RBP5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 TUBB2AQ13885 445 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 HSP90AB2PQ58FF8 381 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 TRIM65Q6PJ69 517 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 FAM114A1Q8IWE2 563 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 RBM41Q96IZ5 413 aaKnown RBP5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 FMNL2Q96PY5 1086 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 TUBB2BQ9BVA1 445 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 NAGPAQ9UK23 515 aa5.75□□□□□ -1.49
TMEM39A-206ENST00000473684 ZSCAN12O43309 604 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 FIBPO43427 364 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 ZEB2O60315 1214 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 N4BP1O75113 896 aaKnown RBP5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 E2F6O75461 281 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 PRPF6O94906 941 aaKnown RBP5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 F13A1P00488 732 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 TRIM27P14373 513 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 ZNF24P17028 368 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 TMF1P82094 1093 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 ACTN3Q08043 901 aaPredicted RBP5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 CCDC15Q0P6D6 951 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 CASP8Q14790 479 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 PERM1Q5SV97 790 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 THEMIS2Q5TEJ8 643 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 PLD4Q96BZ4 506 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 TRIM4Q9C037 500 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 CLEC4MQ9H2X3 399 aaPredicted RBP5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 UNC45AQ9H3U1 944 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 ACTR5Q9H9F9 607 aaPredicted RBP5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 SLC39A2Q9NP94 309 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 PAPOLBQ9NRJ5 636 aaKnown RBP5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 TMEM39AQ9NV64 488 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 GPN3Q9UHW5 284 aaPredicted RBP5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 SOX13Q9UN79 622 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 CDHR2Q9BYE9 1310 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 DISP3Q9P2K9 1392 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 ADARB2-AS1A8MUL3 147 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 GNAI3P08754 354 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 SFPQP23246 707 aaKnown RBP eCLIP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms