RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 USP11P51784 963 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 PMS1P54277 932 aaKnown RBP6.99□□□□□ -1.29
CLK1-210ENST00000473565 CYP4A11Q02928 519 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 POTEGQ6S5H5 508 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 POTEEQ6S8J3 1075 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 PRPF38AQ8NAV1 312 aaKnown RBP6.99□□□□□ -1.29
CLK1-210ENST00000473565 IL31RAQ8NI17 732 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 ETNPPLQ8TBG4 499 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 ENOX1Q8TC92 643 aaKnown RBP6.99□□□□□ -1.29
CLK1-210ENST00000473565 KLRG1Q96E93 195 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 GLT8D2Q9H1C3 349 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 KIAA1024Q9UPX6 916 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 RIPK3Q9Y572 518 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 ABCB11O95342 1321 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 NPHP3-ACAD11A0A0J9YXS1 232 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 GOLGA6L6A8MZA4 724 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 MED24O75448 989 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 GCFC2P16383 781 aaKnown RBP6.99□□□□□ -1.29
CLK1-210ENST00000473565 ZNF18P17022 549 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 BACE1P56817 501 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 STK4Q13043 487 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 ORC2Q13416 577 aaPredicted RBP6.99□□□□□ -1.29
CLK1-210ENST00000473565 ILDR2Q71H61 639 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.99□□□□□ -1.29
CLK1-210ENST00000473565 ZNF280CQ8ND82 737 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 GLIS3Q8NEA6 775 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 NELFBQ8WX92 580 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 LARP4BQ92615 738 aaKnown RBP6.99□□□□□ -1.29
CLK1-210ENST00000473565 PYM1Q9BRP8 204 aaKnown RBP6.99□□□□□ -1.29
CLK1-210ENST00000473565 DACH1Q9UI36 760 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 ZNF112Q9UJU3 913 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 MRPL11Q9Y3B7 192 aaKnown RBP6.99□□□□□ -1.29
CLK1-210ENST00000473565 CYP3A7-CYP3A51PA0A087WV96 503 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 ICAM1P05362 532 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 IDEP14735 1019 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 CYP3A7P24462 503 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 CDC25BP30305 580 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 PDE4DQ08499 809 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 SPIRE1Q08AE8 756 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 ZNF658Q5TYW1 1059 aaPredicted RBP6.99□□□□□ -1.29
CLK1-210ENST00000473565 CLEC4DQ8WXI8 215 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 MBOAT7Q96N66 472 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 RAB34Q9BZG1 259 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 SLC39A2Q9NP94 309 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 COL11A1P12107 1806 aaPredicted RBP6.99□□□□□ -1.29
CLK1-210ENST00000473565 PHIPQ8WWQ0 1821 aa6.98□□□□□ -1.29
CLK1-210ENST00000473565 IGLV3-22A0A075B6J6 115 aa6.98□□□□□ -1.29
CLK1-210ENST00000473565 PIK3CDO00329 1044 aa6.98□□□□□ -1.29
CLK1-210ENST00000473565 EML1O00423 815 aa6.98□□□□□ -1.29
CLK1-210ENST00000473565 TEX33O43247 280 aa6.98□□□□□ -1.29
CLK1-210ENST00000473565 USP2O75604 605 aaPredicted RBP6.98□□□□□ -1.29
CLK1-210ENST00000473565 FOSP01100 380 aaPredicted RBP6.98□□□□□ -1.29
CLK1-210ENST00000473565 ARP10275 920 aa6.98□□□□□ -1.29
CLK1-210ENST00000473565 PSMC6P62333 389 aa6.98□□□□□ -1.29
CLK1-210ENST00000473565 VGLL4Q14135 290 aa6.98□□□□□ -1.29
CLK1-210ENST00000473565 PDIA5Q14554 519 aa6.98□□□□□ -1.29
CLK1-210ENST00000473565 TMEM119Q4V9L6 283 aa6.98□□□□□ -1.29
CLK1-210ENST00000473565 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.98□□□□□ -1.29
CLK1-210ENST00000473565 SV2BQ7L1I2 683 aa6.98□□□□□ -1.29
CLK1-210ENST00000473565 LPAR1Q92633 364 aa6.98□□□□□ -1.29
CLK1-210ENST00000473565 RAD54LQ92698 747 aa6.98□□□□□ -1.29
CLK1-210ENST00000473565 BCAS3Q9H6U6 928 aa6.98□□□□□ -1.29
CLK1-210ENST00000473565 SLC38A10Q9HBR0 1119 aa6.98□□□□□ -1.29
CLK1-210ENST00000473565 ADARB2Q9NS39 739 aaKnown RBP6.98□□□□□ -1.29
CLK1-210ENST00000473565 RGL1Q9NZL6 768 aa6.98□□□□□ -1.29
CLK1-210ENST00000473565 PPP1R9AQ9ULJ8 1098 aa6.98□□□□□ -1.29
CLK1-210ENST00000473565 DDX39AO00148 427 aaKnown RBP6.98□□□□□ -1.29
CLK1-210ENST00000473565 PLA2G6O60733 806 aa6.98□□□□□ -1.29
CLK1-210ENST00000473565 ERCC5P28715 1186 aaPredicted RBP6.98□□□□□ -1.29
CLK1-210ENST00000473565 LRRC41Q15345 812 aa6.98□□□□□ -1.29
CLK1-210ENST00000473565 TPD52L1Q16890 204 aaPredicted RBP6.98□□□□□ -1.29
CLK1-210ENST00000473565 SPATA1Q5VX52 437 aa6.98□□□□□ -1.29
CLK1-210ENST00000473565 ARMCX5Q6P1M9 558 aa6.98□□□□□ -1.29
CLK1-210ENST00000473565 NSMFQ6X4W1 530 aa6.98□□□□□ -1.29
CLK1-210ENST00000473565 CLMNQ96JQ2 1002 aa6.98□□□□□ -1.29
CLK1-210ENST00000473565 TBC1D7Q9P0N9 293 aa6.98□□□□□ -1.29
CLK1-210ENST00000473565 PARP14Q460N5 1801 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 NKRFO15226 690 aaKnown RBP eCLIP6.97□□□□□ -1.29
CLK1-210ENST00000473565 EIF2AK2P19525 551 aaKnown RBP6.97□□□□□ -1.29
CLK1-210ENST00000473565 PAK1Q13153 545 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 Q4G0T1 1027 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 APTXQ7Z2E3 356 aaKnown RBP6.97□□□□□ -1.29
CLK1-210ENST00000473565 KRT26Q7Z3Y9 468 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 CATSPER3Q86XQ3 398 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 KIAA0895Q8NCT3 520 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.97□□□□□ -1.29
CLK1-210ENST00000473565 DDX12PQ92771 950 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 DCPSQ96C86 337 aaKnown RBP6.97□□□□□ -1.29
CLK1-210ENST00000473565 C7orf25Q9BPX7 421 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 FGFBP2Q9BYJ0 223 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 EXOC1Q9NV70 894 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 RMND1Q9NWS8 449 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 VAV3Q9UKW4 847 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 CTDP1Q9Y5B0 961 aaPredicted RBP6.97□□□□□ -1.29
CLK1-210ENST00000473565 SNCAIPQ9Y6H5 919 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 RLFQ13129 1914 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 VWA5AO00534 786 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 ZBTB39O15060 712 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 ZNF500O60304 480 aaPredicted RBP6.97□□□□□ -1.29
CLK1-210ENST00000473565 RHOBTB3O94955 611 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms