RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 HVCN1Q96D96 273 aa6.96□□□□□ -1.3
RTF1-203ENST00000473214 CLUHP3Q96NS8 147 aa6.96□□□□□ -1.3
RTF1-203ENST00000473214 IWS1Q96ST2 819 aa6.96□□□□□ -1.3
RTF1-203ENST00000473214 DHRS4Q9BTZ2 278 aa6.96□□□□□ -1.3
RTF1-203ENST00000473214 KRTAP4-7Q9BYR0 210 aa6.96□□□□□ -1.3
RTF1-203ENST00000473214 ANLNQ9NQW6 1124 aa6.96□□□□□ -1.3
RTF1-203ENST00000473214 DDX21Q9NR30 783 aaKnown RBP eCLIP6.96□□□□□ -1.3
RTF1-203ENST00000473214 KLK14Q9P0G3 267 aa6.96□□□□□ -1.3
RTF1-203ENST00000473214 TLR6Q9Y2C9 796 aa6.96□□□□□ -1.3
RTF1-203ENST00000473214 ANKRD6Q9Y2G4 727 aa6.96□□□□□ -1.3
RTF1-203ENST00000473214 TMX2Q9Y320 296 aa6.96□□□□□ -1.3
RTF1-203ENST00000473214 LRRFIP2Q9Y608 721 aaKnown RBP6.96□□□□□ -1.3
RTF1-203ENST00000473214 MAGI2Q86UL8 1455 aa6.96□□□□□ -1.3
RTF1-203ENST00000473214 CFAP74Q9C0B2 1584 aa6.95□□□□□ -1.3
RTF1-203ENST00000473214 DIP2CQ9Y2E4 1556 aa6.95□□□□□ -1.3
RTF1-203ENST00000473214 ABCA6Q8N139 1617 aa6.95□□□□□ -1.3
RTF1-203ENST00000473214 A0A087WZG4 1122 aa6.95□□□□□ -1.3
RTF1-203ENST00000473214 TSPY2A6NKD2 308 aa6.95□□□□□ -1.3
RTF1-203ENST00000473214 C19orf81C9J6K1 198 aa6.95□□□□□ -1.3
RTF1-203ENST00000473214 CHL1O00533 1208 aa6.95□□□□□ -1.3
RTF1-203ENST00000473214 CNOT4O95628 575 aaKnown RBP6.95□□□□□ -1.3
RTF1-203ENST00000473214 TSPY3P0CV98 308 aa6.95□□□□□ -1.3
RTF1-203ENST00000473214 TSPY8P0CW00 308 aa6.95□□□□□ -1.3
RTF1-203ENST00000473214 GYS1P13807 737 aa6.95□□□□□ -1.3
RTF1-203ENST00000473214 ZKSCAN1P17029 563 aaPredicted RBP6.95□□□□□ -1.3
RTF1-203ENST00000473214 CYP2C19P33261 490 aa6.95□□□□□ -1.3
RTF1-203ENST00000473214 ARSDP51689 593 aa6.95□□□□□ -1.3
RTF1-203ENST00000473214 TSPY1Q01534 308 aa6.95□□□□□ -1.3
RTF1-203ENST00000473214 PFKPQ01813 784 aa6.95□□□□□ -1.3
RTF1-203ENST00000473214 MLLT1Q03111 559 aaPredicted RBP6.95□□□□□ -1.3
RTF1-203ENST00000473214 DGKZQ13574 1117 aa6.95□□□□□ -1.3
RTF1-203ENST00000473214 DHCR24Q15392 516 aa6.95□□□□□ -1.3
RTF1-203ENST00000473214 LCE1DQ5T752 114 aa6.95□□□□□ -1.3
RTF1-203ENST00000473214 HEATR6Q6AI08 1181 aaKnown RBP6.95□□□□□ -1.3
RTF1-203ENST00000473214 MRM1Q6IN84 353 aaKnown RBP6.95□□□□□ -1.3
RTF1-203ENST00000473214 TBC1D1Q86TI0 1168 aaPredicted RBP6.95□□□□□ -1.3
RTF1-203ENST00000473214 FAM26EQ8N5C1 309 aa6.95□□□□□ -1.3
RTF1-203ENST00000473214 GCC1Q96CN9 775 aa6.95□□□□□ -1.3
RTF1-203ENST00000473214 CFAP53Q96M91 514 aa6.95□□□□□ -1.3
RTF1-203ENST00000473214 SPAG5Q96R06 1193 aa6.95□□□□□ -1.3
RTF1-203ENST00000473214 CRB3Q9BUF7 120 aa6.95□□□□□ -1.3
RTF1-203ENST00000473214 NAA15Q9BXJ9 866 aaKnown RBP6.95□□□□□ -1.3
RTF1-203ENST00000473214 SMG9Q9H0W8 520 aaKnown RBP6.95□□□□□ -1.3
RTF1-203ENST00000473214 TBC1D22BQ9NU19 505 aa6.95□□□□□ -1.3
RTF1-203ENST00000473214 TRMT13Q9NUP7 481 aaKnown RBP6.95□□□□□ -1.3
RTF1-203ENST00000473214 ARHGAP28Q9P2N2 729 aa6.95□□□□□ -1.3
RTF1-203ENST00000473214 A0A1B0GVC2 190 aa6.94□□□□□ -1.3
RTF1-203ENST00000473214 SYNDIG1LA6NDD5 238 aa6.94□□□□□ -1.3
RTF1-203ENST00000473214 TLR5O60602 858 aa6.94□□□□□ -1.3
RTF1-203ENST00000473214 SASH3O75995 380 aa6.94□□□□□ -1.3
RTF1-203ENST00000473214 ARIH2O95376 493 aa6.94□□□□□ -1.3
RTF1-203ENST00000473214 RPLP1P05386 114 aaKnown RBP6.94□□□□□ -1.3
RTF1-203ENST00000473214 RARAP10276 462 aa6.94□□□□□ -1.3
RTF1-203ENST00000473214 HSD3B1P14060 373 aa6.94□□□□□ -1.3
RTF1-203ENST00000473214 LPOP22079 712 aaPredicted RBP6.94□□□□□ -1.3
RTF1-203ENST00000473214 KIF5BP33176 963 aa6.94□□□□□ -1.3
RTF1-203ENST00000473214 CTNNA1P35221 906 aaKnown RBP6.94□□□□□ -1.3
RTF1-203ENST00000473214 CD97P48960 835 aa6.94□□□□□ -1.3
RTF1-203ENST00000473214 NRLP54845 237 aa6.94□□□□□ -1.3
RTF1-203ENST00000473214 PLIN5Q00G26 463 aa6.94□□□□□ -1.3
RTF1-203ENST00000473214 CAMK2GQ13555 558 aaPredicted RBP6.94□□□□□ -1.3
RTF1-203ENST00000473214 C11orf91Q3C1V1 193 aa6.94□□□□□ -1.3
RTF1-203ENST00000473214 HIBCHQ6NVY1 386 aaPredicted RBP6.94□□□□□ -1.3
RTF1-203ENST00000473214 PKN3Q6P5Z2 889 aa6.94□□□□□ -1.3
RTF1-203ENST00000473214 CPLX2Q6PUV4 134 aaKnown RBP6.94□□□□□ -1.3
RTF1-203ENST00000473214 FAM196AQ6ZSG2 479 aa6.94□□□□□ -1.3
RTF1-203ENST00000473214 GALNT5Q7Z7M9 940 aa6.94□□□□□ -1.3
RTF1-203ENST00000473214 LSRQ86X29 649 aaPredicted RBP6.94□□□□□ -1.3
RTF1-203ENST00000473214 NBPF5PQ86XG9 351 aaPredicted RBP6.94□□□□□ -1.3
RTF1-203ENST00000473214 LRRC47Q8N1G4 583 aaKnown RBP6.94□□□□□ -1.3
RTF1-203ENST00000473214 TMEM130Q8N3G9 435 aa6.94□□□□□ -1.3
RTF1-203ENST00000473214 TAB3Q8N5C8 712 aaPredicted RBP6.94□□□□□ -1.3
RTF1-203ENST00000473214 KCT2Q8NC54 265 aa6.94□□□□□ -1.3
RTF1-203ENST00000473214 ZBTB10Q96DT7 871 aa6.94□□□□□ -1.3
RTF1-203ENST00000473214 NUDT16L1Q9BRJ7 211 aaKnown RBP6.94□□□□□ -1.3
RTF1-203ENST00000473214 TSPY26PQ9H489 355 aa6.94□□□□□ -1.3
RTF1-203ENST00000473214 AKTIPQ9H8T0 292 aa6.94□□□□□ -1.3
RTF1-203ENST00000473214 HELLSQ9NRZ9 838 aa6.94□□□□□ -1.3
RTF1-203ENST00000473214 INTS7Q9NVH2 962 aaKnown RBP6.94□□□□□ -1.3
RTF1-203ENST00000473214 SAMD9Q5K651 1589 aa6.94□□□□□ -1.3
RTF1-203ENST00000473214 TRAPPC8Q9Y2L5 1435 aa6.93□□□□□ -1.3
RTF1-203ENST00000473214 TIPRLO75663 272 aa6.93□□□□□ -1.3
RTF1-203ENST00000473214 CPP00450 1065 aa6.93□□□□□ -1.3
RTF1-203ENST00000473214 EGFRP00533 1210 aa6.93□□□□□ -1.3
RTF1-203ENST00000473214 POLR3DP05423 398 aaPredicted RBP6.93□□□□□ -1.3
RTF1-203ENST00000473214 PYGLP06737 847 aa6.93□□□□□ -1.3
RTF1-203ENST00000473214 MYBL2P10244 700 aa6.93□□□□□ -1.3
RTF1-203ENST00000473214 FSTP19883 344 aa6.93□□□□□ -1.3
RTF1-203ENST00000473214 GRK6P43250 576 aa6.93□□□□□ -1.3
RTF1-203ENST00000473214 LIG3P49916 1009 aa6.93□□□□□ -1.3
RTF1-203ENST00000473214 IRAK1P51617 712 aa6.93□□□□□ -1.3
RTF1-203ENST00000473214 ALDH5A1P51649 535 aaPredicted RBP6.93□□□□□ -1.3
RTF1-203ENST00000473214 NEK4P51957 841 aa6.93□□□□□ -1.3
RTF1-203ENST00000473214 LMNB2Q03252 620 aa6.93□□□□□ -1.3
RTF1-203ENST00000473214 GTF2H3Q13889 308 aa6.93□□□□□ -1.3
RTF1-203ENST00000473214 MAP7Q14244 749 aa6.93□□□□□ -1.3
RTF1-203ENST00000473214 GRM2Q14416 872 aa6.93□□□□□ -1.3
RTF1-203ENST00000473214 SMC1AQ14683 1233 aaKnown RBP6.93□□□□□ -1.3
RTF1-203ENST00000473214 PLCB4Q15147 1175 aa6.93□□□□□ -1.3
RTF1-203ENST00000473214 RILPL1Q5EBL4 403 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms