RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 TRIM34Q9BYJ4 488 aa16.78■□□□□ 0.28
UBXN11-213ENST00000472155 ANO3Q9BYT9 981 aa16.78■□□□□ 0.28
UBXN11-213ENST00000472155 DHX36Q9H2U1 1008 aaKnown RBP16.78■□□□□ 0.28
UBXN11-213ENST00000472155 MAGEF1Q9HAY2 307 aa16.78■□□□□ 0.28
UBXN11-213ENST00000472155 NYAP2Q9P242 653 aa16.78■□□□□ 0.28
UBXN11-213ENST00000472155 MAGEC2Q9UBF1 373 aaPredicted RBP16.78■□□□□ 0.28
UBXN11-213ENST00000472155 OPLAHO14841 1288 aa16.78■□□□□ 0.28
UBXN11-213ENST00000472155 PPIP5K2O43314 1243 aa16.78■□□□□ 0.28
UBXN11-213ENST00000472155 TUBB4AP04350 444 aa16.78■□□□□ 0.28
UBXN11-213ENST00000472155 PPP2R3AQ06190 1150 aa16.78■□□□□ 0.28
UBXN11-213ENST00000472155 PDIA5Q14554 519 aa16.78■□□□□ 0.28
UBXN11-213ENST00000472155 PPP1R18Q6NYC8 613 aa16.78■□□□□ 0.28
UBXN11-213ENST00000472155 CYP26C1Q6V0L0 522 aa16.78■□□□□ 0.28
UBXN11-213ENST00000472155 UNC13DQ70J99 1090 aa16.78■□□□□ 0.28
UBXN11-213ENST00000472155 FLAD1Q8NFF5 587 aa16.78■□□□□ 0.28
UBXN11-213ENST00000472155 CSRNP1Q96S65 589 aa16.78■□□□□ 0.28
UBXN11-213ENST00000472155 TTYH3Q9C0H2 523 aa16.78■□□□□ 0.28
UBXN11-213ENST00000472155 ST7Q9NRC1 585 aa16.78■□□□□ 0.28
UBXN11-213ENST00000472155 DDX41Q9UJV9 622 aaKnown RBP16.78■□□□□ 0.28
UBXN11-213ENST00000472155 KIAA1024Q9UPX6 916 aa16.78■□□□□ 0.28
UBXN11-213ENST00000472155 GOLGA6L9A6NEM1 432 aa16.77■□□□□ 0.28
UBXN11-213ENST00000472155 TPM1P09493 284 aa16.77■□□□□ 0.28
UBXN11-213ENST00000472155 AMPD3Q01432 767 aa16.77■□□□□ 0.28
UBXN11-213ENST00000472155 CENPPQ6IPU0 288 aa16.77■□□□□ 0.28
UBXN11-213ENST00000472155 CNNM4Q6P4Q7 775 aa16.77■□□□□ 0.28
UBXN11-213ENST00000472155 TMTC1Q8IUR5 882 aa16.77■□□□□ 0.28
UBXN11-213ENST00000472155 ACER1Q8TDN7 264 aa16.77■□□□□ 0.28
UBXN11-213ENST00000472155 UBXN4Q92575 508 aa16.77■□□□□ 0.28
UBXN11-213ENST00000472155 ZBTB9Q96C00 473 aa16.77■□□□□ 0.28
UBXN11-213ENST00000472155 NOC4LQ9BVI4 516 aaKnown RBP16.77■□□□□ 0.28
UBXN11-213ENST00000472155 PUF60Q9UHX1 559 aaKnown RBP16.77■□□□□ 0.28
UBXN11-213ENST00000472155 SERPINA10Q9UK55 444 aa16.77■□□□□ 0.28
UBXN11-213ENST00000472155 LUC7L2Q9Y383 392 aaKnown RBP16.77■□□□□ 0.28
UBXN11-213ENST00000472155 SEC31AO94979 1220 aaKnown RBP16.77■□□□□ 0.27
UBXN11-213ENST00000472155 TEX35Q5T0J7 233 aa16.77■□□□□ 0.27
UBXN11-213ENST00000472155 CCDC84Q86UT8 332 aaPredicted RBP16.77■□□□□ 0.27
UBXN11-213ENST00000472155 TBC1D5Q92609 795 aa16.77■□□□□ 0.27
UBXN11-213ENST00000472155 CCDC51Q96ER9 411 aa16.77■□□□□ 0.27
UBXN11-213ENST00000472155 RCCD1A6NED2 376 aa16.76■□□□□ 0.27
UBXN11-213ENST00000472155 MED24O75448 989 aa16.76■□□□□ 0.27
UBXN11-213ENST00000472155 NDUFA10O95299 355 aa16.76■□□□□ 0.27
UBXN11-213ENST00000472155 PLEKP08567 350 aaPredicted RBP16.76■□□□□ 0.27
UBXN11-213ENST00000472155 ZSCAN20P17040 1043 aaPredicted RBP16.76■□□□□ 0.27
UBXN11-213ENST00000472155 PSMC6P62333 389 aa16.76■□□□□ 0.27
UBXN11-213ENST00000472155 HERVK_113P62684 666 aa16.76■□□□□ 0.27
UBXN11-213ENST00000472155 ORC2Q13416 577 aaPredicted RBP16.76■□□□□ 0.27
UBXN11-213ENST00000472155 PRR16Q569H4 304 aa16.76■□□□□ 0.27
UBXN11-213ENST00000472155 SAMD1Q6SPF0 538 aaPredicted RBP16.76■□□□□ 0.27
UBXN11-213ENST00000472155 OR8K1Q8NGG5 319 aa16.76■□□□□ 0.27
UBXN11-213ENST00000472155 DNAJC7Q99615 494 aa16.76■□□□□ 0.27
UBXN11-213ENST00000472155 STK17AQ9UEE5 414 aa16.76■□□□□ 0.27
UBXN11-213ENST00000472155 CAPN11Q9UMQ6 739 aa16.76■□□□□ 0.27
UBXN11-213ENST00000472155 EPN1Q9Y6I3 576 aaPredicted RBP16.76■□□□□ 0.27
UBXN11-213ENST00000472155 POTEFA5A3E0 1075 aa16.76■□□□□ 0.27
UBXN11-213ENST00000472155 FAM86B1E9PN63 330 aa16.76■□□□□ 0.27
UBXN11-213ENST00000472155 MEIS1O00470 390 aa16.76■□□□□ 0.27
UBXN11-213ENST00000472155 FAM86B2P0C5J1 330 aa16.76■□□□□ 0.27
UBXN11-213ENST00000472155 POTEIP0CG38 1075 aa16.76■□□□□ 0.27
UBXN11-213ENST00000472155 TRIM21P19474 475 aaKnown RBP16.76■□□□□ 0.27
UBXN11-213ENST00000472155 EHHADHQ08426 723 aa16.76■□□□□ 0.27
UBXN11-213ENST00000472155 POTEGQ6S5H5 508 aa16.76■□□□□ 0.27
UBXN11-213ENST00000472155 POTEEQ6S8J3 1075 aa16.76■□□□□ 0.27
UBXN11-213ENST00000472155 PCMTD1Q96MG8 357 aaPredicted RBP16.76■□□□□ 0.27
UBXN11-213ENST00000472155 COL4A5P29400 1685 aa16.76■□□□□ 0.27
UBXN11-213ENST00000472155 A0A1W2PQC6 194 aa16.75■□□□□ 0.27
UBXN11-213ENST00000472155 DNM2P50570 870 aa16.75■□□□□ 0.27
UBXN11-213ENST00000472155 TMEM179Q6ZVK1 233 aa16.75■□□□□ 0.27
UBXN11-213ENST00000472155 DCAF4Q8WV16 495 aa16.75■□□□□ 0.27
UBXN11-213ENST00000472155 GUCA1BQ9UMX6 200 aa16.75■□□□□ 0.27
UBXN11-213ENST00000472155 BICDL2A1A5D9 508 aa16.75■□□□□ 0.27
UBXN11-213ENST00000472155 KIF5CO60282 957 aa16.75■□□□□ 0.27
UBXN11-213ENST00000472155 COASYQ13057 564 aa16.75■□□□□ 0.27
UBXN11-213ENST00000472155 ZYXQ15942 572 aaKnown RBP16.75■□□□□ 0.27
UBXN11-213ENST00000472155 SLC15A2Q16348 729 aa16.75■□□□□ 0.27
UBXN11-213ENST00000472155 NELFCDQ8IXH7 590 aa16.75■□□□□ 0.27
UBXN11-213ENST00000472155 CCDC47Q96A33 483 aaKnown RBP16.75■□□□□ 0.27
UBXN11-213ENST00000472155 MRIQ9BWK5 157 aa16.75■□□□□ 0.27
UBXN11-213ENST00000472155 KCNMB3Q9NPA1 279 aa16.75■□□□□ 0.27
UBXN11-213ENST00000472155 ZNF277Q9NRM2 450 aaPredicted RBP16.75■□□□□ 0.27
UBXN11-213ENST00000472155 DUSP10Q9Y6W6 482 aa16.75■□□□□ 0.27
UBXN11-213ENST00000472155 C10orf71Q711Q0 1435 aa16.74■□□□□ 0.27
UBXN11-213ENST00000472155 ARHGAP4P98171 946 aa16.74■□□□□ 0.27
UBXN11-213ENST00000472155 CYP27A1Q02318 531 aa16.74■□□□□ 0.27
UBXN11-213ENST00000472155 APBA1Q02410 837 aa16.74■□□□□ 0.27
UBXN11-213ENST00000472155 LRRC55Q6ZSA7 311 aa16.74■□□□□ 0.27
UBXN11-213ENST00000472155 FAM207AQ9NSI2 230 aaPredicted RBP16.74■□□□□ 0.27
UBXN11-213ENST00000472155 HDLBPQ00341 1268 aaKnown RBP16.74■□□□□ 0.27
UBXN11-213ENST00000472155 TRIM14Q14142 442 aa16.74■□□□□ 0.27
UBXN11-213ENST00000472155 KRT26Q7Z3Y9 468 aa16.74■□□□□ 0.27
UBXN11-213ENST00000472155 CRYGNQ8WXF5 182 aa16.74■□□□□ 0.27
UBXN11-213ENST00000472155 LENG9Q96B70 501 aa16.74■□□□□ 0.27
UBXN11-213ENST00000472155 RAB34Q9BZG1 259 aa16.74■□□□□ 0.27
UBXN11-213ENST00000472155 ENC1O14682 589 aa16.73■□□□□ 0.27
UBXN11-213ENST00000472155 UBXN2AP68543 259 aa16.73■□□□□ 0.27
UBXN11-213ENST00000472155 SPIRE1Q08AE8 756 aa16.73■□□□□ 0.27
UBXN11-213ENST00000472155 SYDE2Q5VT97 1194 aa16.73■□□□□ 0.27
UBXN11-213ENST00000472155 ZNF772Q68DY9 489 aaPredicted RBP16.73■□□□□ 0.27
UBXN11-213ENST00000472155 MIGA2Q7L4E1 593 aa16.73■□□□□ 0.27
UBXN11-213ENST00000472155 LACRTQ9GZZ8 138 aa16.73■□□□□ 0.27
UBXN11-213ENST00000472155 HDAC6Q9UBN7 1215 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms