RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 CPSF2Q9P2I0 782 aaKnown RBP16.52■□□□□ 0.23
LIMS2-213ENST00000469300 ABT1Q9ULW3 272 aaKnown RBP16.52■□□□□ 0.23
LIMS2-213ENST00000469300 PHLPP2Q6ZVD8 1323 aa16.52■□□□□ 0.23
LIMS2-213ENST00000469300 GSG1L2A8MUP6 293 aa16.52■□□□□ 0.23
LIMS2-213ENST00000469300 JAK3P52333 1124 aa16.52■□□□□ 0.23
LIMS2-213ENST00000469300 IFT20Q8IY31 132 aa16.52■□□□□ 0.23
LIMS2-213ENST00000469300 MB21D2Q8IYB1 491 aaPredicted RBP16.52■□□□□ 0.23
LIMS2-213ENST00000469300 AMFRQ9UKV5 643 aa16.52■□□□□ 0.23
LIMS2-213ENST00000469300 CYP2D6P10635 497 aa16.51■□□□□ 0.23
LIMS2-213ENST00000469300 PDE6CP51160 858 aa16.51■□□□□ 0.23
LIMS2-213ENST00000469300 ZNF658Q5TYW1 1059 aaPredicted RBP16.51■□□□□ 0.23
LIMS2-213ENST00000469300 ZHX2Q9Y6X8 837 aa16.51■□□□□ 0.23
LIMS2-213ENST00000469300 CEP104O60308 925 aa16.51■□□□□ 0.23
LIMS2-213ENST00000469300 CACNB3P54284 484 aa16.51■□□□□ 0.23
LIMS2-213ENST00000469300 UBXN2AP68543 259 aa16.51■□□□□ 0.23
LIMS2-213ENST00000469300 GRM4Q14833 912 aa16.51■□□□□ 0.23
LIMS2-213ENST00000469300 SURF1Q15526 300 aa16.51■□□□□ 0.23
LIMS2-213ENST00000469300 ZNF827Q17R98 1081 aa16.51■□□□□ 0.23
LIMS2-213ENST00000469300 STYK1Q6J9G0 422 aa16.51■□□□□ 0.23
LIMS2-213ENST00000469300 NT5C1BQ96P26 610 aa16.51■□□□□ 0.23
LIMS2-213ENST00000469300 NR2F2P24468 414 aa16.51■□□□□ 0.23
LIMS2-213ENST00000469300 IGBP1P78318 339 aa16.51■□□□□ 0.23
LIMS2-213ENST00000469300 CEP57Q86XR8 500 aa16.51■□□□□ 0.23
LIMS2-213ENST00000469300 RNF169Q8NCN4 708 aa16.51■□□□□ 0.23
LIMS2-213ENST00000469300 CCDC127Q96BQ5 260 aa16.51■□□□□ 0.23
LIMS2-213ENST00000469300 FAM167AQ96KS9 214 aa16.51■□□□□ 0.23
LIMS2-213ENST00000469300 TLR3O15455 904 aaKnown RBP16.51■□□□□ 0.23
LIMS2-213ENST00000469300 ERCC3P19447 782 aa16.51■□□□□ 0.23
LIMS2-213ENST00000469300 SGMS1Q86VZ5 419 aa16.51■□□□□ 0.23
LIMS2-213ENST00000469300 PRPF38AQ8NAV1 312 aaKnown RBP16.51■□□□□ 0.23
LIMS2-213ENST00000469300 U2AF1L4Q8WU68 220 aaKnown RBP16.51■□□□□ 0.23
LIMS2-213ENST00000469300 HAUS4Q9H6D7 363 aa16.51■□□□□ 0.23
LIMS2-213ENST00000469300 NTSR2O95665 410 aa16.5■□□□□ 0.23
LIMS2-213ENST00000469300 H2AFZP0C0S5 128 aa16.5■□□□□ 0.23
LIMS2-213ENST00000469300 DLATP10515 647 aaKnown RBP16.5■□□□□ 0.23
LIMS2-213ENST00000469300 ALDH3A1P30838 453 aa16.5■□□□□ 0.23
LIMS2-213ENST00000469300 COPB1P53618 953 aaKnown RBP16.5■□□□□ 0.23
LIMS2-213ENST00000469300 HADHQ16836 314 aaKnown RBP16.5■□□□□ 0.23
LIMS2-213ENST00000469300 H2AFVQ71UI9 128 aa16.5■□□□□ 0.23
LIMS2-213ENST00000469300 ENAHQ8N8S7 591 aaPredicted RBP16.5■□□□□ 0.23
LIMS2-213ENST00000469300 FAM20AQ96MK3 541 aa16.5■□□□□ 0.23
LIMS2-213ENST00000469300 PARVGQ9HBI0 331 aa16.5■□□□□ 0.23
LIMS2-213ENST00000469300 INO80B-WBP1J3KQ70 363 aa16.5■□□□□ 0.23
LIMS2-213ENST00000469300 LRMPQ12912 555 aa16.5■□□□□ 0.23
LIMS2-213ENST00000469300 PDXDC2PQ6P474 469 aa16.5■□□□□ 0.23
LIMS2-213ENST00000469300 HDXQ7Z353 690 aa16.5■□□□□ 0.23
LIMS2-213ENST00000469300 NEK9Q8TD19 979 aa16.5■□□□□ 0.23
LIMS2-213ENST00000469300 CACTINQ8WUQ7 758 aaKnown RBP16.5■□□□□ 0.23
LIMS2-213ENST00000469300 INO80BQ9C086 356 aaPredicted RBP16.5■□□□□ 0.23
LIMS2-213ENST00000469300 AKT3Q9Y243 479 aa16.5■□□□□ 0.23
LIMS2-213ENST00000469300 PLEKHA8P1O95397 391 aa16.5■□□□□ 0.23
LIMS2-213ENST00000469300 MFAP3P55082 362 aa16.5■□□□□ 0.23
LIMS2-213ENST00000469300 PTK2Q05397 1052 aa16.5■□□□□ 0.23
LIMS2-213ENST00000469300 PPM1KQ8N3J5 372 aa16.5■□□□□ 0.23
LIMS2-213ENST00000469300 MYRIPQ8NFW9 859 aa16.5■□□□□ 0.23
LIMS2-213ENST00000469300 TUBGCP2Q9BSJ2 902 aa16.5■□□□□ 0.23
LIMS2-213ENST00000469300 TBC1D22BQ9NU19 505 aa16.5■□□□□ 0.23
LIMS2-213ENST00000469300 ENTPD3O75355 529 aa16.49■□□□□ 0.23
LIMS2-213ENST00000469300 CEP95Q96GE4 821 aa16.49■□□□□ 0.23
LIMS2-213ENST00000469300 CNOT6LQ96LI5 555 aaKnown RBP16.49■□□□□ 0.23
LIMS2-213ENST00000469300 ST7Q9NRC1 585 aa16.49■□□□□ 0.23
LIMS2-213ENST00000469300 LRRIQ1Q96JM4 1722 aa16.49■□□□□ 0.23
LIMS2-213ENST00000469300 EIF2AK2P19525 551 aaKnown RBP16.49■□□□□ 0.23
LIMS2-213ENST00000469300 PPP4R3CPQ6ZMV5 832 aa16.49■□□□□ 0.23
LIMS2-213ENST00000469300 CCDC63Q8NA47 563 aa16.49■□□□□ 0.23
LIMS2-213ENST00000469300 NSUN4Q96CB9 384 aaKnown RBP16.49■□□□□ 0.23
LIMS2-213ENST00000469300 USTQ9Y2C2 406 aa16.49■□□□□ 0.23
LIMS2-213ENST00000469300 ADGRB1O14514 1584 aa16.49■□□□□ 0.23
LIMS2-213ENST00000469300 LACTBP83111 547 aaPredicted RBP16.49■□□□□ 0.23
LIMS2-213ENST00000469300 STXBP2Q15833 593 aa16.49■□□□□ 0.23
LIMS2-213ENST00000469300 FAM186BQ8IYM0 893 aa16.49■□□□□ 0.23
LIMS2-213ENST00000469300 MMS19Q96T76 1030 aa16.49■□□□□ 0.23
LIMS2-213ENST00000469300 ITPK1Q13572 414 aa16.49■□□□□ 0.23
LIMS2-213ENST00000469300 MAN2A1Q16706 1144 aa16.49■□□□□ 0.23
LIMS2-213ENST00000469300 SBK1Q52WX2 424 aa16.49■□□□□ 0.23
LIMS2-213ENST00000469300 HHIPL2Q6UWX4 724 aa16.49■□□□□ 0.23
LIMS2-213ENST00000469300 TDRD7Q8NHU6 1098 aaKnown RBP16.49■□□□□ 0.23
LIMS2-213ENST00000469300 NSUN6Q8TEA1 469 aaKnown RBP16.49■□□□□ 0.23
LIMS2-213ENST00000469300 ANKFY1Q9P2R3 1169 aa16.49■□□□□ 0.23
LIMS2-213ENST00000469300 NEDD4P46934 1319 aa16.48■□□□□ 0.23
LIMS2-213ENST00000469300 PSDA5PKW4 1024 aaPredicted RBP16.48■□□□□ 0.23
LIMS2-213ENST00000469300 F5H6K3 240 aa16.48■□□□□ 0.23
LIMS2-213ENST00000469300 GRIN3BO60391 1043 aa16.48■□□□□ 0.23
LIMS2-213ENST00000469300 KLRC3Q07444 240 aa16.48■□□□□ 0.23
LIMS2-213ENST00000469300 C12orf60Q5U649 245 aa16.48■□□□□ 0.23
LIMS2-213ENST00000469300 ABI1Q8IZP0 508 aa16.48■□□□□ 0.23
LIMS2-213ENST00000469300 ZNF579Q8NAF0 562 aaKnown RBP16.48■□□□□ 0.23
LIMS2-213ENST00000469300 ANKRD36BP1Q96IX9 119 aa16.48■□□□□ 0.23
LIMS2-213ENST00000469300 PSMD1Q99460 953 aa16.48■□□□□ 0.23
LIMS2-213ENST00000469300 TLDC2A0PJX2 215 aa16.48■□□□□ 0.23
LIMS2-213ENST00000469300 PLA2G4BP0C869 781 aa16.48■□□□□ 0.23
LIMS2-213ENST00000469300 CCNE1P24864 410 aa16.48■□□□□ 0.23
LIMS2-213ENST00000469300 UBE2SQ16763 222 aa16.48■□□□□ 0.23
LIMS2-213ENST00000469300 FAM83BQ5T0W9 1011 aa16.48■□□□□ 0.23
LIMS2-213ENST00000469300 PDZD4Q76G19 769 aaPredicted RBP16.48■□□□□ 0.23
LIMS2-213ENST00000469300 PAIP2Q9BPZ3 127 aaKnown RBP16.48■□□□□ 0.23
LIMS2-213ENST00000469300 NUB1Q9Y5A7 615 aa16.48■□□□□ 0.23
LIMS2-213ENST00000469300 ARL1P40616 181 aaPredicted RBP16.48■□□□□ 0.23
LIMS2-213ENST00000469300 TOB2Q14106 344 aaPredicted RBP16.48■□□□□ 0.23
LIMS2-213ENST00000469300 NBPF11Q86T75 865 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms