RNA–Protein interactions for RNA: ENST00000468822.5

SRRM1-207, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 768 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-207ENST00000468822 CHST3Q7LGC8 479 aa18.15■□□□□ 0.5
SRRM1-207ENST00000468822 ZNF589Q86UQ0 364 aaPredicted RBP18.15■□□□□ 0.5
SRRM1-207ENST00000468822 CAGE1Q8TC20 777 aa18.15■□□□□ 0.5
SRRM1-207ENST00000468822 TAAR1Q96RJ0 339 aa18.15■□□□□ 0.5
SRRM1-207ENST00000468822 UBA5Q9GZZ9 404 aa18.15■□□□□ 0.5
SRRM1-207ENST00000468822 C5orf42Q9H799 3197 aa18.14■□□□□ 0.49
SRRM1-207ENST00000468822 LINC01553A4QN01 128 aa18.14■□□□□ 0.49
SRRM1-207ENST00000468822 CKBP12277 381 aa18.14■□□□□ 0.49
SRRM1-207ENST00000468822 RBL2Q08999 1139 aa18.14■□□□□ 0.49
SRRM1-207ENST00000468822 DIEXFQ68CQ4 756 aaKnown RBP18.14■□□□□ 0.49
SRRM1-207ENST00000468822 TBC1D10CQ8IV04 446 aa18.14■□□□□ 0.49
SRRM1-207ENST00000468822 SYTL5Q8TDW5 730 aaPredicted RBP18.14■□□□□ 0.49
SRRM1-207ENST00000468822 HELLSQ9NRZ9 838 aa18.14■□□□□ 0.49
SRRM1-207ENST00000468822 ARIH1Q9Y4X5 557 aaPredicted RBP18.14■□□□□ 0.49
SRRM1-207ENST00000468822 GPR37L1O60883 481 aa18.13■□□□□ 0.49
SRRM1-207ENST00000468822 GJB5O95377 273 aa18.13■□□□□ 0.49
SRRM1-207ENST00000468822 HSPD1P10809 573 aaKnown RBP18.13■□□□□ 0.49
SRRM1-207ENST00000468822 HIC1Q14526 733 aa18.13■□□□□ 0.49
SRRM1-207ENST00000468822 TRIM71Q2Q1W2 868 aaKnown RBP18.13■□□□□ 0.49
SRRM1-207ENST00000468822 CNKSR3Q6P9H4 555 aa18.13■□□□□ 0.49
SRRM1-207ENST00000468822 RGS22Q8NE09 1264 aa18.13■□□□□ 0.49
SRRM1-207ENST00000468822 MPHOSPH6Q99547 160 aaKnown RBP18.13■□□□□ 0.49
SRRM1-207ENST00000468822 ZBED2Q9BTP6 218 aa18.13■□□□□ 0.49
SRRM1-207ENST00000468822 HDAC6Q9UBN7 1215 aa18.13■□□□□ 0.49
SRRM1-207ENST00000468822 GTF2IRD1Q9UHL9 959 aa18.13■□□□□ 0.49
SRRM1-207ENST00000468822 HCN4Q9Y3Q4 1203 aa18.13■□□□□ 0.49
SRRM1-207ENST00000468822 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.12■□□□□ 0.49
SRRM1-207ENST00000468822 GH1P01241 217 aa18.12■□□□□ 0.49
SRRM1-207ENST00000468822 ERVK-21P61565 698 aa18.12■□□□□ 0.49
SRRM1-207ENST00000468822 ZNF200P98182 395 aaPredicted RBP18.12■□□□□ 0.49
SRRM1-207ENST00000468822 FAM117BQ6P1L5 589 aa18.12■□□□□ 0.49
SRRM1-207ENST00000468822 CCDC155Q8N6L0 562 aa18.12■□□□□ 0.49
SRRM1-207ENST00000468822 EVI5LQ96CN4 794 aa18.12■□□□□ 0.49
SRRM1-207ENST00000468822 RAD9AQ99638 391 aa18.12■□□□□ 0.49
SRRM1-207ENST00000468822 ZKSCAN3Q9BRR0 538 aa18.12■□□□□ 0.49
SRRM1-207ENST00000468822 UBE2ZQ9H832 354 aaPredicted RBP18.12■□□□□ 0.49
SRRM1-207ENST00000468822 LMCD1Q9NZU5 365 aa18.12■□□□□ 0.49
SRRM1-207ENST00000468822 PNMA2Q9UL42 364 aa18.12■□□□□ 0.49
SRRM1-207ENST00000468822 PI4K2BG5E9Z4 385 aa18.11■□□□□ 0.49
SRRM1-207ENST00000468822 ZNF286BP0CG31 522 aa18.11■□□□□ 0.49
SRRM1-207ENST00000468822 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.11■□□□□ 0.499e-11■■■□□ 16.3
SRRM1-207ENST00000468822 TTC14Q96N46 770 aa18.11■□□□□ 0.49
SRRM1-207ENST00000468822 DDX41Q9UJV9 622 aaKnown RBP18.11■□□□□ 0.49
SRRM1-207ENST00000468822 NEDD4P46934 1319 aa18.11■□□□□ 0.49
SRRM1-207ENST00000468822 ZMYM6O95789 1325 aa18.1■□□□□ 0.49
SRRM1-207ENST00000468822 ABHD14A-ACY1A0A1B0GW23 586 aa18.1■□□□□ 0.49
SRRM1-207ENST00000468822 PSEN2P49810 448 aa18.1■□□□□ 0.49
SRRM1-207ENST00000468822 NMIQ13287 307 aaPredicted RBP18.1■□□□□ 0.49
SRRM1-207ENST00000468822 MKRN4PQ13434 485 aaPredicted RBP18.1■□□□□ 0.49
SRRM1-207ENST00000468822 CDC37Q16543 378 aaPredicted RBP18.1■□□□□ 0.49
SRRM1-207ENST00000468822 MCMDC2Q4G0Z9 681 aa18.1■□□□□ 0.49
SRRM1-207ENST00000468822 ZNF618Q5T7W0 954 aa18.1■□□□□ 0.49
SRRM1-207ENST00000468822 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.1■□□□□ 0.49
SRRM1-207ENST00000468822 TGS1Q96RS0 853 aaKnown RBP18.1■□□□□ 0.49
SRRM1-207ENST00000468822 C17orf80Q9BSJ5 609 aa18.1■□□□□ 0.49
SRRM1-207ENST00000468822 ALG1Q9BT22 464 aa18.1■□□□□ 0.49
SRRM1-207ENST00000468822 KIAA1217Q5T5P2 1943 aa18.1■□□□□ 0.49
SRRM1-207ENST00000468822 B4DLN1 442 aa18.09■□□□□ 0.49
SRRM1-207ENST00000468822 HAS3O00219 553 aa18.09■□□□□ 0.49
SRRM1-207ENST00000468822 F2P00734 622 aa18.09■□□□□ 0.49
SRRM1-207ENST00000468822 CASTP20810 708 aaKnown RBP18.09■□□□□ 0.49
SRRM1-207ENST00000468822 KCNA5P22460 613 aa18.09■□□□□ 0.49
SRRM1-207ENST00000468822 MRPL12P52815 198 aaKnown RBP18.09■□□□□ 0.49
SRRM1-207ENST00000468822 PDE1AP54750 535 aa18.09■□□□□ 0.49
SRRM1-207ENST00000468822 DGKDQ16760 1214 aa18.09■□□□□ 0.49
SRRM1-207ENST00000468822 GPATCH4Q5T3I0 446 aaKnown RBP18.09■□□□□ 0.49
SRRM1-207ENST00000468822 MFSD6Q6ZSS7 791 aa18.09■□□□□ 0.49
SRRM1-207ENST00000468822 FAM178BQ8IXR5 827 aa18.09■□□□□ 0.49
SRRM1-207ENST00000468822 ADGRF4Q8IZF3 695 aa18.09■□□□□ 0.49
SRRM1-207ENST00000468822 C7orf31Q8N865 590 aa18.09■□□□□ 0.49
SRRM1-207ENST00000468822 NSUN6Q8TEA1 469 aaKnown RBP18.09■□□□□ 0.49
SRRM1-207ENST00000468822 RMDN3Q96TC7 470 aa18.09■□□□□ 0.49
SRRM1-207ENST00000468822 SIP14410 1827 aa18.09■□□□□ 0.49
SRRM1-207ENST00000468822 OPLAHO14841 1288 aa18.08■□□□□ 0.48
SRRM1-207ENST00000468822 RGS20O76081 388 aa18.08■□□□□ 0.48
SRRM1-207ENST00000468822 IL9P15248 144 aa18.08■□□□□ 0.48
SRRM1-207ENST00000468822 EIF2AK2P19525 551 aaKnown RBP18.08■□□□□ 0.48
SRRM1-207ENST00000468822 PTK7Q13308 1070 aa18.08■□□□□ 0.48
SRRM1-207ENST00000468822 MFSD10Q14728 455 aa18.08■□□□□ 0.48
SRRM1-207ENST00000468822 STXBP2Q15833 593 aa18.08■□□□□ 0.48
SRRM1-207ENST00000468822 KIAA0753Q2KHM9 967 aa18.08■□□□□ 0.48
SRRM1-207ENST00000468822 LEXMQ3ZCV2 418 aa18.08■□□□□ 0.48
SRRM1-207ENST00000468822 EMID1Q96A84 441 aaPredicted RBP18.08■□□□□ 0.48
SRRM1-207ENST00000468822 OSBPL7Q9BZF2 842 aa18.08■□□□□ 0.48
SRRM1-207ENST00000468822 ABCB11O95342 1321 aa18.07■□□□□ 0.48
SRRM1-207ENST00000468822 SORBS3O60504 671 aa18.07■□□□□ 0.48
SRRM1-207ENST00000468822 PARNO95453 639 aaKnown RBP18.07■□□□□ 0.48
SRRM1-207ENST00000468822 IKBKEQ14164 716 aa18.07■□□□□ 0.48
SRRM1-207ENST00000468822 QRICH1Q2TAL8 776 aa18.07■□□□□ 0.48
SRRM1-207ENST00000468822 ANKRD45Q5TZF3 282 aa18.07■□□□□ 0.48
SRRM1-207ENST00000468822 GJD3Q8N144 294 aa18.07■□□□□ 0.48
SRRM1-207ENST00000468822 PPTC7Q8NI37 304 aa18.07■□□□□ 0.48
SRRM1-207ENST00000468822 IWS1Q96ST2 819 aa18.07■□□□□ 0.48
SRRM1-207ENST00000468822 CCDC171Q6TFL3 1326 aa18.06■□□□□ 0.48
SRRM1-207ENST00000468822 LGR5O75473 907 aa18.06■□□□□ 0.48
SRRM1-207ENST00000468822 HOXD8P13378 290 aaPredicted RBP18.06■□□□□ 0.48
SRRM1-207ENST00000468822 DGKHQ86XP1 1220 aa18.06■□□□□ 0.48
SRRM1-207ENST00000468822 PNMA1Q8ND90 353 aa18.06■□□□□ 0.48
SRRM1-207ENST00000468822 JMJD4Q9H9V9 463 aa18.06■□□□□ 0.48
SRRM1-207ENST00000468822 PXMP2Q9NR77 195 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms