RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 PROCA1Q8NCQ7 364 aaPredicted RBP21.36■■□□□ 1.01
SMC4-209ENST00000468653 ETNPPLQ8TBG4 499 aa21.36■■□□□ 1.01
SMC4-209ENST00000468653 SNX29Q8TEQ0 813 aa21.36■■□□□ 1.01
SMC4-209ENST00000468653 LENG9Q96B70 501 aa21.36■■□□□ 1.01
SMC4-209ENST00000468653 FAM20AQ96MK3 541 aa21.36■■□□□ 1.01
SMC4-209ENST00000468653 CASP1P29466 404 aa21.35■■□□□ 1.01
SMC4-209ENST00000468653 TMEM132BQ14DG7 1078 aa21.35■■□□□ 1.01
SMC4-209ENST00000468653 SYTL5Q8TDW5 730 aaPredicted RBP21.35■■□□□ 1.01
SMC4-209ENST00000468653 OPTNQ96CV9 577 aa21.35■■□□□ 1.01
SMC4-209ENST00000468653 GSDMAQ96QA5 445 aa21.35■■□□□ 1.01
SMC4-209ENST00000468653 BPIFA3Q9BQP9 254 aa21.35■■□□□ 1.01
SMC4-209ENST00000468653 TEX13BQ9BXU2 312 aa21.35■■□□□ 1.01
SMC4-209ENST00000468653 MAGEF1Q9HAY2 307 aa21.35■■□□□ 1.01
SMC4-209ENST00000468653 ZNF214Q9UL59 606 aaPredicted RBP21.35■■□□□ 1.01
SMC4-209ENST00000468653 RLFQ13129 1914 aa21.35■■□□□ 1.01
SMC4-209ENST00000468653 ATP2A1O14983 1001 aa21.34■■□□□ 1.01
SMC4-209ENST00000468653 RPS6P62753 249 aaKnown RBP21.34■■□□□ 1.01
SMC4-209ENST00000468653 PLS1Q14651 629 aa21.34■■□□□ 1.01
SMC4-209ENST00000468653 LDLRAD1Q5T700 205 aa21.34■■□□□ 1.01
SMC4-209ENST00000468653 NSMFQ6X4W1 530 aa21.34■■□□□ 1.01
SMC4-209ENST00000468653 RNF207Q6ZRF8 634 aa21.34■■□□□ 1.01
SMC4-209ENST00000468653 CYP2W1Q8TAV3 490 aa21.34■■□□□ 1.01
SMC4-209ENST00000468653 PPP1R9BQ96SB3 815 aa21.34■■□□□ 1.01
SMC4-209ENST00000468653 MTRQ99707 1265 aa21.34■■□□□ 1.01
SMC4-209ENST00000468653 BLZF1Q9H2G9 400 aa21.34■■□□□ 1.01
SMC4-209ENST00000468653 COL20A1Q9P218 1284 aa21.34■■□□□ 1.01
SMC4-209ENST00000468653 KCNH4Q9UQ05 1017 aa21.34■■□□□ 1.01
SMC4-209ENST00000468653 RIPK3Q9Y572 518 aa21.34■■□□□ 1.01
SMC4-209ENST00000468653 MSH4O15457 936 aa21.33■■□□□ 1.01
SMC4-209ENST00000468653 MORC3Q14149 939 aa21.33■■□□□ 1.01
SMC4-209ENST00000468653 PLA2G4DQ86XP0 818 aa21.33■■□□□ 1.01
SMC4-209ENST00000468653 DHX40Q8IX18 779 aaKnown RBP21.33■■□□□ 1.01
SMC4-209ENST00000468653 AOPEPQ8N6M6 819 aa21.33■■□□□ 1.01
SMC4-209ENST00000468653 IGLV3-22A0A075B6J6 115 aa21.33■■□□□ 1
SMC4-209ENST00000468653 HOXA7P31268 230 aaPredicted RBP21.33■■□□□ 1
SMC4-209ENST00000468653 STAT3P40763 770 aa21.33■■□□□ 1
SMC4-209ENST00000468653 IRX3P78415 501 aaPredicted RBP21.33■■□□□ 1
SMC4-209ENST00000468653 GRB10Q13322 594 aa21.33■■□□□ 1
SMC4-209ENST00000468653 TKFCQ3LXA3 575 aa21.33■■□□□ 1
SMC4-209ENST00000468653 CEP55Q53EZ4 464 aa21.33■■□□□ 1
SMC4-209ENST00000468653 SLC10A4Q96EP9 437 aa21.33■■□□□ 1
SMC4-209ENST00000468653 KBTBD4Q9NVX7 518 aa21.33■■□□□ 1
SMC4-209ENST00000468653 PTPRFP10586 1907 aa21.32■■□□□ 1
SMC4-209ENST00000468653 RPTORQ8N122 1335 aa21.32■■□□□ 1
SMC4-209ENST00000468653 BMP6P22004 513 aa21.32■■□□□ 1
SMC4-209ENST00000468653 FMR1Q06787 632 aaKnown RBP eCLIP21.32■■□□□ 13e-7■□□□□ 10
SMC4-209ENST00000468653 CUL4BQ13620 913 aa21.32■■□□□ 1
SMC4-209ENST00000468653 SLC30A10Q6XR72 485 aa21.32■■□□□ 1
SMC4-209ENST00000468653 MLKLQ8NB16 471 aa21.32■■□□□ 1
SMC4-209ENST00000468653 STK17AQ9UEE5 414 aa21.32■■□□□ 1
SMC4-209ENST00000468653 DACH1Q9UI36 760 aa21.32■■□□□ 1
SMC4-209ENST00000468653 SMTNL1A8MU46 457 aa21.31■■□□□ 1
SMC4-209ENST00000468653 MYL1P05976 194 aa21.31■■□□□ 1
SMC4-209ENST00000468653 CCT6AP40227 531 aaKnown RBP21.31■■□□□ 1
SMC4-209ENST00000468653 LRRC15Q8TF66 581 aa21.31■■□□□ 1
SMC4-209ENST00000468653 PNMA5Q96PV4 448 aa21.31■■□□□ 1
SMC4-209ENST00000468653 TAAR1Q96RJ0 339 aa21.31■■□□□ 1
SMC4-209ENST00000468653 NUDT12Q9BQG2 462 aa21.31■■□□□ 1
SMC4-209ENST00000468653 COL11A1P12107 1806 aaPredicted RBP21.31■■□□□ 1
SMC4-209ENST00000468653 ADCY5O95622 1261 aa21.31■■□□□ 1
SMC4-209ENST00000468653 SETQ01105 290 aaPredicted RBP21.31■■□□□ 1
SMC4-209ENST00000468653 AMPD3Q01432 767 aa21.31■■□□□ 1
SMC4-209ENST00000468653 BAATQ14032 418 aaPredicted RBP21.31■■□□□ 1
SMC4-209ENST00000468653 FASTKD5Q7L8L6 764 aaKnown RBP21.31■■□□□ 1
SMC4-209ENST00000468653 MB21D1Q8N884 522 aa21.31■■□□□ 1
SMC4-209ENST00000468653 ZFP91Q96JP5 570 aaPredicted RBP21.31■■□□□ 1
SMC4-209ENST00000468653 AGTPBP1Q9UPW5 1226 aa21.31■■□□□ 1
SMC4-209ENST00000468653 KDM3AQ9Y4C1 1321 aa21.3■■□□□ 1
SMC4-209ENST00000468653 DCAF8L1A6NGE4 600 aa21.3■■□□□ 1
SMC4-209ENST00000468653 UNCXA6NJT0 531 aa21.3■■□□□ 1
SMC4-209ENST00000468653 SLC26A4O43511 780 aa21.3■■□□□ 1
SMC4-209ENST00000468653 NCAPH2Q6IBW4 605 aa21.3■■□□□ 1
SMC4-209ENST00000468653 ERMNQ8TAM6 284 aa21.3■■□□□ 1
SMC4-209ENST00000468653 PDLIM2Q96JY6 352 aa21.3■■□□□ 1
SMC4-209ENST00000468653 RMDN3Q96TC7 470 aa21.3■■□□□ 1
SMC4-209ENST00000468653 MXRA8Q9BRK3 442 aa21.3■■□□□ 1
SMC4-209ENST00000468653 ACAD9Q9H845 621 aa21.3■■□□□ 1
SMC4-209ENST00000468653 RMND1Q9NWS8 449 aa21.3■■□□□ 1
SMC4-209ENST00000468653 STK24Q9Y6E0 443 aa21.3■■□□□ 1
SMC4-209ENST00000468653 MEIS1O00470 390 aa21.29■■□□□ 1
SMC4-209ENST00000468653 RPN1P04843 607 aaKnown RBP21.29■■□□□ 1
SMC4-209ENST00000468653 EIF2AK2P19525 551 aaKnown RBP21.29■■□□□ 1
SMC4-209ENST00000468653 TPM4P67936 248 aa21.29■■□□□ 1
SMC4-209ENST00000468653 TMEM119Q4V9L6 283 aa21.29■■□□□ 1
SMC4-209ENST00000468653 ARHGEF16Q5VV41 709 aa21.29■■□□□ 1
SMC4-209ENST00000468653 PCNX4Q63HM2 1172 aa21.29■■□□□ 1
SMC4-209ENST00000468653 HAUS3Q68CZ6 603 aa21.29■■□□□ 1
SMC4-209ENST00000468653 LBX2Q6XYB7 198 aa21.29■■□□□ 1
SMC4-209ENST00000468653 SV2BQ7L1I2 683 aa21.29■■□□□ 1
SMC4-209ENST00000468653 NT5C3AQ9H0P0 336 aa21.29■■□□□ 1
SMC4-209ENST00000468653 LOC285556D6RIA3 1793 aa21.28■■□□□ 1
SMC4-209ENST00000468653 RBBP6Q7Z6E9 1792 aaKnown RBP21.28■■□□□ 1
SMC4-209ENST00000468653 SOCS7O14512 581 aa21.28■■□□□ 1
SMC4-209ENST00000468653 AP5Z1O43299 807 aa21.28■■□□□ 1
SMC4-209ENST00000468653 SPIRE1Q08AE8 756 aa21.28■■□□□ 1
SMC4-209ENST00000468653 SNAPC2Q13487 334 aa21.28■■□□□ 1
SMC4-209ENST00000468653 DHX8Q14562 1220 aaKnown RBP21.28■■□□□ 1
SMC4-209ENST00000468653 LRCH2Q5VUJ6 765 aa21.28■■□□□ 1
SMC4-209ENST00000468653 IL31RAQ8NI17 732 aa21.28■■□□□ 1
SMC4-209ENST00000468653 ASCC2Q9H1I8 757 aaPredicted RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms