RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 BARHL2Q9NY43 387 aa14.84□□□□□ -0.03
COL5A1-206ENST00000465877 RBM27Q9P2N5 1060 aaKnown RBP14.84□□□□□ -0.03
COL5A1-206ENST00000465877 ATP11BQ9Y2G3 1177 aa14.84□□□□□ -0.03
COL5A1-206ENST00000465877 V9GY48 417 aaPredicted RBP14.84□□□□□ -0.03
COL5A1-206ENST00000465877 EIF3JO75822 258 aaKnown RBP14.83□□□□□ -0.04
COL5A1-206ENST00000465877 TXNP10599 105 aaKnown RBP14.83□□□□□ -0.04
COL5A1-206ENST00000465877 SCG2P13521 617 aa14.83□□□□□ -0.04
COL5A1-206ENST00000465877 CPT1AP50416 773 aa14.83□□□□□ -0.04
COL5A1-206ENST00000465877 C1orf53Q5VUE5 145 aa14.83□□□□□ -0.04
COL5A1-206ENST00000465877 CCDC62Q6P9F0 684 aa14.83□□□□□ -0.04
COL5A1-206ENST00000465877 COPS5Q92905 334 aa14.83□□□□□ -0.04
COL5A1-206ENST00000465877 ZNF274Q96GC6 653 aaPredicted RBP14.83□□□□□ -0.04
COL5A1-206ENST00000465877 GLT1D1Q96MS3 346 aa14.83□□□□□ -0.04
COL5A1-206ENST00000465877 LARP6Q9BRS8 491 aaKnown RBP14.83□□□□□ -0.04
COL5A1-206ENST00000465877 RNF26Q9BY78 433 aaPredicted RBP14.83□□□□□ -0.04
COL5A1-206ENST00000465877 ZMYND8Q9ULU4 1186 aaPredicted RBP14.83□□□□□ -0.04
COL5A1-206ENST00000465877 MRVI1Q9Y6F6 885 aa14.83□□□□□ -0.04
COL5A1-206ENST00000465877 SPDYE3A6NKU9 549 aa14.82□□□□□ -0.04
COL5A1-206ENST00000465877 RGS20O76081 388 aa14.82□□□□□ -0.04
COL5A1-206ENST00000465877 IFNAR1P17181 557 aa14.82□□□□□ -0.04
COL5A1-206ENST00000465877 SYN1P17600 705 aa14.82□□□□□ -0.04
COL5A1-206ENST00000465877 ADCY7P51828 1080 aa14.82□□□□□ -0.04
COL5A1-206ENST00000465877 ARHGAP1Q07960 439 aa14.82□□□□□ -0.04
COL5A1-206ENST00000465877 STK3Q13188 491 aa14.82□□□□□ -0.04
COL5A1-206ENST00000465877 VSIG10LQ86VR7 867 aa14.82□□□□□ -0.04
COL5A1-206ENST00000465877 SLC26A6Q9BXS9 759 aa14.82□□□□□ -0.04
COL5A1-206ENST00000465877 RIC8AQ9NPQ8 531 aa14.82□□□□□ -0.04
COL5A1-206ENST00000465877 ELP1O95163 1332 aa14.82□□□□□ -0.04
COL5A1-206ENST00000465877 A0A0U1RQG5 324 aaPredicted RBP14.81□□□□□ -0.04
COL5A1-206ENST00000465877 PRPF3O43395 683 aaKnown RBP14.81□□□□□ -0.04
COL5A1-206ENST00000465877 ZEB2O60315 1214 aa14.81□□□□□ -0.04
COL5A1-206ENST00000465877 PPFIA3O75145 1194 aa14.81□□□□□ -0.04
COL5A1-206ENST00000465877 STAM2O75886 525 aa14.81□□□□□ -0.04
COL5A1-206ENST00000465877 GH1P01241 217 aa14.81□□□□□ -0.04
COL5A1-206ENST00000465877 AK2P54819 239 aa14.81□□□□□ -0.04
COL5A1-206ENST00000465877 MRPS9P82933 396 aaKnown RBP14.81□□□□□ -0.04
COL5A1-206ENST00000465877 AKAP17AQ02040 695 aaKnown RBP14.81□□□□□ -0.04
COL5A1-206ENST00000465877 PKN1Q16512 942 aa14.81□□□□□ -0.04
COL5A1-206ENST00000465877 LY6KQ17RY6 165 aa14.81□□□□□ -0.04
COL5A1-206ENST00000465877 GNPTABQ3T906 1256 aa14.81□□□□□ -0.04
COL5A1-206ENST00000465877 PCNX4Q63HM2 1172 aa14.81□□□□□ -0.04
COL5A1-206ENST00000465877 CXCL17Q6UXB2 119 aa14.81□□□□□ -0.04
COL5A1-206ENST00000465877 ALDH8A1Q9H2A2 487 aaPredicted RBP14.81□□□□□ -0.04
COL5A1-206ENST00000465877 PCDH10Q9P2E7 1040 aa14.81□□□□□ -0.04
COL5A1-206ENST00000465877 MROH7Q68CQ1 1323 aa14.81□□□□□ -0.04
COL5A1-206ENST00000465877 ESYT2A0FGR8 921 aa14.8□□□□□ -0.04
COL5A1-206ENST00000465877 CPLX1O14810 134 aa14.8□□□□□ -0.04
COL5A1-206ENST00000465877 PQBP1O60828 265 aaKnown RBP14.8□□□□□ -0.04
COL5A1-206ENST00000465877 CABYRO75952 493 aa14.8□□□□□ -0.04
COL5A1-206ENST00000465877 UBA1P22314 1058 aaKnown RBP14.8□□□□□ -0.04
COL5A1-206ENST00000465877 ANKRD1Q15327 319 aa14.8□□□□□ -0.04
COL5A1-206ENST00000465877 BRDTQ58F21 947 aaPredicted RBP14.8□□□□□ -0.04
COL5A1-206ENST00000465877 TEX2Q8IWB9 1127 aa14.8□□□□□ -0.04
COL5A1-206ENST00000465877 TRIM22Q8IYM9 498 aa14.8□□□□□ -0.04
COL5A1-206ENST00000465877 CCDC12Q8WUD4 166 aaPredicted RBP14.8□□□□□ -0.04
COL5A1-206ENST00000465877 ZFP91Q96JP5 570 aaPredicted RBP14.8□□□□□ -0.04
COL5A1-206ENST00000465877 PGBD1Q96JS3 809 aa14.8□□□□□ -0.04
COL5A1-206ENST00000465877 INPP4AQ96PE3 977 aaPredicted RBP14.8□□□□□ -0.04
COL5A1-206ENST00000465877 EHMT1Q9H9B1 1298 aa14.8□□□□□ -0.04
COL5A1-206ENST00000465877 PDLIM7Q9NR12 457 aa14.8□□□□□ -0.04
COL5A1-206ENST00000465877 POLR3EQ9NVU0 708 aa14.8□□□□□ -0.04
COL5A1-206ENST00000465877 DDX41Q9UJV9 622 aaKnown RBP14.8□□□□□ -0.04
COL5A1-206ENST00000465877 TPCN1Q9ULQ1 816 aa14.8□□□□□ -0.04
COL5A1-206ENST00000465877 LAMA2P24043 3122 aaKnown RBP14.8□□□□□ -0.04
COL5A1-206ENST00000465877 SMCO2A6NFE2 343 aa14.79□□□□□ -0.04
COL5A1-206ENST00000465877 A6NJR5 290 aa14.79□□□□□ -0.04
COL5A1-206ENST00000465877 MMP3P08254 477 aa14.79□□□□□ -0.04
COL5A1-206ENST00000465877 MYL3P08590 195 aa14.79□□□□□ -0.04
COL5A1-206ENST00000465877 PURAQ00577 322 aaKnown RBP14.79□□□□□ -0.04
COL5A1-206ENST00000465877 TLE2Q04725 743 aa14.79□□□□□ -0.04
COL5A1-206ENST00000465877 SCRN1Q12765 414 aa14.79□□□□□ -0.04
COL5A1-206ENST00000465877 AP3B2Q13367 1082 aa14.79□□□□□ -0.04
COL5A1-206ENST00000465877 WDR81Q562E7 1941 aa14.79□□□□□ -0.04
COL5A1-206ENST00000465877 KCNV1Q6PIU1 500 aa14.79□□□□□ -0.04
COL5A1-206ENST00000465877 CPLX2Q6PUV4 134 aaKnown RBP14.79□□□□□ -0.04
COL5A1-206ENST00000465877 CHRDL2Q6WN34 429 aa14.79□□□□□ -0.04
COL5A1-206ENST00000465877 CCDC148Q8NFR7 591 aa14.79□□□□□ -0.04
COL5A1-206ENST00000465877 EMID1Q96A84 441 aaPredicted RBP14.79□□□□□ -0.04
COL5A1-206ENST00000465877 ANO3Q9BYT9 981 aa14.79□□□□□ -0.04
COL5A1-206ENST00000465877 GLT8D2Q9H1C3 349 aa14.79□□□□□ -0.04
COL5A1-206ENST00000465877 TRIOBPQ9H2D6 2365 aa14.79□□□□□ -0.04
COL5A1-206ENST00000465877 PRDM5Q9NQX1 630 aaPredicted RBP14.79□□□□□ -0.04
COL5A1-206ENST00000465877 PCDHA6Q9UN73 950 aa14.79□□□□□ -0.04
COL5A1-206ENST00000465877 PCDHA8Q9Y5H6 950 aa14.79□□□□□ -0.04
COL5A1-206ENST00000465877 STK36Q9NRP7 1315 aa14.78□□□□□ -0.04
COL5A1-206ENST00000465877 FIBPO43427 364 aa14.78□□□□□ -0.04
COL5A1-206ENST00000465877 PFKFB2O60825 505 aa14.78□□□□□ -0.04
COL5A1-206ENST00000465877 DEXIO95424 95 aa14.78□□□□□ -0.04
COL5A1-206ENST00000465877 LARGE1O95461 756 aa14.78□□□□□ -0.04
COL5A1-206ENST00000465877 CLTBP09497 229 aa14.78□□□□□ -0.04
COL5A1-206ENST00000465877 CLK2P49760 499 aaKnown RBP14.78□□□□□ -0.04
COL5A1-206ENST00000465877 NEK4P51957 841 aa14.78□□□□□ -0.04
COL5A1-206ENST00000465877 XRRA1Q6P2D8 792 aa14.78□□□□□ -0.04
COL5A1-206ENST00000465877 ANKRD33Q7Z3H0 272 aa14.78□□□□□ -0.04
COL5A1-206ENST00000465877 AFG1LQ8WV93 481 aa14.78□□□□□ -0.04
COL5A1-206ENST00000465877 VTI1AQ96AJ9 217 aa14.78□□□□□ -0.04
COL5A1-206ENST00000465877 ZMYND12Q9H0C1 365 aa14.78□□□□□ -0.04
COL5A1-206ENST00000465877 SLKQ9H2G2 1235 aaPredicted RBP14.78□□□□□ -0.04
COL5A1-206ENST00000465877 VPS54Q9P1Q0 977 aa14.78□□□□□ -0.04
COL5A1-206ENST00000465877 PRKAG2Q9UGJ0 569 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms