RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 SLC12A9Q9BXP2 914 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 ZC3H12CQ9C0D7 883 aaKnown RBP3.83□□□□□ -1.8
SMC4-203ENST00000462668 ZMAT4Q9H898 229 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 PCDHB12Q9Y5F1 795 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 SNRPB2P08579 225 aaKnown RBP3.82□□□□□ -1.8
SMC4-203ENST00000462668 BCRP11274 1271 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 AGXTP21549 392 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 RXRGP48443 463 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 SLC41A1Q8IVJ1 513 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 ZNF610Q8N9Z0 462 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 C2CD4AQ8NCU7 369 aaPredicted RBP3.82□□□□□ -1.8
SMC4-203ENST00000462668 JADE3Q92613 823 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 CSRNP2Q9H175 543 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 PDLIM7Q9NR12 457 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 MBIPQ9NS73 344 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 PDP2Q9P2J9 529 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 SLITRK5O94991 958 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 SOD2P04179 222 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 IFIT2P09913 472 aaKnown RBP3.82□□□□□ -1.8
SMC4-203ENST00000462668 SDHAP31040 664 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 ELF2Q15723 593 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 HYIQ5T013 277 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 FBXO11Q86XK2 927 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 GPR62Q9BZJ7 368 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 SMURF1Q9HCE7 757 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 GTF2A1LQ9UNN4 478 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 GPR52Q9Y2T5 361 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 PCDHA8Q9Y5H6 950 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 H3BML4 177 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 PAPLNO95428 1278 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 EOMESO95936 686 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 AMY2AP04746 511 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 AMY2BP19961 511 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 EIF5P55010 431 aaKnown RBP3.82□□□□□ -1.8
SMC4-203ENST00000462668 BROXQ5VW32 411 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 IQCEQ6IPM2 695 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 BRINP3Q76B58 766 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 TEX19Q8NA77 164 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 ACSS3Q9H6R3 686 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 RC3H2Q9HBD1 1191 aaKnown RBP3.82□□□□□ -1.8
SMC4-203ENST00000462668 PCOLCE2Q9UKZ9 415 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 WASF3Q9UPY6 502 aa3.82□□□□□ -1.8
SMC4-203ENST00000462668 ZNF205O95201 554 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 KCNH1O95259 989 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 ALBP02768 609 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 MYBL2P10244 700 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 GRK6P43250 576 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 TRAPPC10P48553 1259 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 ETF1P62495 437 aaKnown RBP3.81□□□□□ -1.8
SMC4-203ENST00000462668 SETQ01105 290 aaPredicted RBP3.81□□□□□ -1.8
SMC4-203ENST00000462668 C1orf229Q6ZS94 237 aaPredicted RBP3.81□□□□□ -1.8
SMC4-203ENST00000462668 SMAP1Q8IYB5 467 aaPredicted RBP3.81□□□□□ -1.8
SMC4-203ENST00000462668 DCAF11Q8TEB1 546 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 AGO4Q9HCK5 861 aaKnown RBP3.81□□□□□ -1.8
SMC4-203ENST00000462668 CCM2LQ9NUG4 571 aaPredicted RBP3.81□□□□□ -1.8
SMC4-203ENST00000462668 LRP2BPQ9P2M1 347 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 RASSF10A6NK89 507 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 SETSIPP0DME0 302 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 DDIT3P35638 169 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 FXR1P51114 621 aaKnown RBP eCLIP3.81□□□□□ -1.8
SMC4-203ENST00000462668 LILRA6Q6PI73 481 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 DIS3LQ8TF46 1054 aaKnown RBP3.81□□□□□ -1.8
SMC4-203ENST00000462668 C16orf92Q96LL3 132 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 COLEC11Q9BWP8 271 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 HDAC8Q9BY41 377 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 C14orf119Q9NWQ9 140 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 CBLCQ9ULV8 474 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 CSADQ9Y600 493 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 TLR5O60602 858 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 RGS9O75916 674 aaPredicted RBP3.81□□□□□ -1.8
SMC4-203ENST00000462668 CNOT4O95628 575 aaKnown RBP3.81□□□□□ -1.8
SMC4-203ENST00000462668 ITIH2P19823 946 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 CASP5P51878 434 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 PCBP4P57723 403 aaKnown RBP3.81□□□□□ -1.8
SMC4-203ENST00000462668 LDHAL6AQ6ZMR3 332 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 GPR155Q7Z3F1 870 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 LRFN3Q9BTN0 628 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 CARD10Q9BWT7 1032 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 BTBD1Q9H0C5 482 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 FAM86C2PA6NEL3 165 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 RASA4BC9J798 803 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 NRG2O14511 850 aaPredicted RBP3.81□□□□□ -1.8
SMC4-203ENST00000462668 RASA4O43374 803 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 ZNF865P0CJ78 1059 aaPredicted RBP3.81□□□□□ -1.8
SMC4-203ENST00000462668 BMP4P12644 408 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 C5AR1P21730 350 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 IREB2P48200 963 aaKnown RBP3.81□□□□□ -1.8
SMC4-203ENST00000462668 FAM193AP78312 1265 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 SOX4Q06945 474 aaPredicted RBP3.81□□□□□ -1.8
SMC4-203ENST00000462668 PDCD1Q15116 288 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 CC2D1AQ6P1N0 951 aaPredicted RBP3.81□□□□□ -1.8
SMC4-203ENST00000462668 Q96M66 194 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 NAP1L4Q99733 375 aaKnown RBP3.81□□□□□ -1.8
SMC4-203ENST00000462668 TMPRSS11EQ9UL52 423 aa3.81□□□□□ -1.8
SMC4-203ENST00000462668 CNTNAP4Q9C0A0 1308 aa3.8□□□□□ -1.8
SMC4-203ENST00000462668 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.8□□□□□ -1.8
SMC4-203ENST00000462668 KLHL33A6NCF5 533 aa3.8□□□□□ -1.8
SMC4-203ENST00000462668 CD68P34810 354 aaPredicted RBP3.8□□□□□ -1.8
SMC4-203ENST00000462668 IL6STP40189 918 aaPredicted RBP3.8□□□□□ -1.8
SMC4-203ENST00000462668 IL2P60568 153 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms