RNA–Protein interactions for RNA: ENST00000462542.5

PCCB-203, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-203ENST00000462542 DGKDQ16760 1214 aa13.72□□□□□ -0.21
PCCB-203ENST00000462542 ZMYM1Q5SVZ6 1142 aa13.72□□□□□ -0.21
PCCB-203ENST00000462542 SLC30A10Q6XR72 485 aa13.72□□□□□ -0.21
PCCB-203ENST00000462542 C7orf31Q8N865 590 aa13.72□□□□□ -0.21
PCCB-203ENST00000462542 DHX38Q92620 1227 aaKnown RBP13.72□□□□□ -0.21
PCCB-203ENST00000462542 KAT2BQ92831 832 aa13.72□□□□□ -0.21
PCCB-203ENST00000462542 SEC62Q99442 399 aaKnown RBP13.72□□□□□ -0.21
PCCB-203ENST00000462542 KATNAL1Q9BW62 490 aa13.72□□□□□ -0.21
PCCB-203ENST00000462542 GPCPD1Q9NPB8 672 aa13.72□□□□□ -0.21
PCCB-203ENST00000462542 COL4A4P53420 1690 aaPredicted RBP13.72□□□□□ -0.21
PCCB-203ENST00000462542 NCK2O43639 380 aa13.71□□□□□ -0.21
PCCB-203ENST00000462542 MMP3P08254 477 aa13.71□□□□□ -0.21
PCCB-203ENST00000462542 FGRP09769 529 aa13.71□□□□□ -0.21
PCCB-203ENST00000462542 HTRA4P83105 476 aaPredicted RBP13.71□□□□□ -0.21
PCCB-203ENST00000462542 CTDSPL2Q05D32 466 aa13.71□□□□□ -0.21
PCCB-203ENST00000462542 TIGD5Q53EQ6 642 aa13.71□□□□□ -0.21
PCCB-203ENST00000462542 FBXL18Q96ME1 805 aa13.71□□□□□ -0.21
PCCB-203ENST00000462542 IWS1Q96ST2 819 aa13.71□□□□□ -0.21
PCCB-203ENST00000462542 TMEM47Q9BQJ4 181 aa13.71□□□□□ -0.21
PCCB-203ENST00000462542 DCTPP1Q9H773 170 aa13.71□□□□□ -0.21
PCCB-203ENST00000462542 INCENPQ9NQS7 918 aa13.71□□□□□ -0.21
PCCB-203ENST00000462542 TCP11L1Q9NUJ3 509 aa13.71□□□□□ -0.21
PCCB-203ENST00000462542 HDAC6Q9UBN7 1215 aa13.71□□□□□ -0.21
PCCB-203ENST00000462542 EMSYQ7Z589 1322 aa13.7□□□□□ -0.22
PCCB-203ENST00000462542 SIP14410 1827 aa13.7□□□□□ -0.22
PCCB-203ENST00000462542 LGR5O75473 907 aa13.7□□□□□ -0.22
PCCB-203ENST00000462542 ARIH2O95376 493 aa13.7□□□□□ -0.22
PCCB-203ENST00000462542 AMHP03971 560 aa13.7□□□□□ -0.22
PCCB-203ENST00000462542 ARHGAP1Q07960 439 aa13.7□□□□□ -0.22
PCCB-203ENST00000462542 STXBP2Q15833 593 aa13.7□□□□□ -0.22
PCCB-203ENST00000462542 LY6KQ17RY6 165 aa13.7□□□□□ -0.22
PCCB-203ENST00000462542 RASGRP2Q7LDG7 609 aa13.7□□□□□ -0.22
PCCB-203ENST00000462542 BANK1Q8NDB2 785 aa13.7□□□□□ -0.22
PCCB-203ENST00000462542 SP7Q8TDD2 431 aaPredicted RBP13.7□□□□□ -0.22
PCCB-203ENST00000462542 PABPC5Q96DU9 382 aaKnown RBP13.7□□□□□ -0.22
PCCB-203ENST00000462542 MFSD14AQ96MC6 490 aa13.7□□□□□ -0.22
PCCB-203ENST00000462542 TTC14Q96N46 770 aa13.7□□□□□ -0.22
PCCB-203ENST00000462542 TTC41PQ6P2S7 1318 aa13.69□□□□□ -0.22
PCCB-203ENST00000462542 C19orf67A6NJJ6 358 aa13.69□□□□□ -0.22
PCCB-203ENST00000462542 H3BNC9 293 aa13.69□□□□□ -0.22
PCCB-203ENST00000462542 PSEN2P49810 448 aa13.69□□□□□ -0.22
PCCB-203ENST00000462542 LAMC2Q13753 1193 aa13.69□□□□□ -0.22
PCCB-203ENST00000462542 ALX1Q15699 326 aa13.69□□□□□ -0.22
PCCB-203ENST00000462542 EPC2Q52LR7 807 aa13.69□□□□□ -0.22
PCCB-203ENST00000462542 ZNF618Q5T7W0 954 aa13.69□□□□□ -0.22
PCCB-203ENST00000462542 FAM117BQ6P1L5 589 aa13.69□□□□□ -0.22
PCCB-203ENST00000462542 SEPT14Q6ZU15 432 aa13.69□□□□□ -0.22
PCCB-203ENST00000462542 NSUN6Q8TEA1 469 aaKnown RBP13.69□□□□□ -0.22
PCCB-203ENST00000462542 EMID1Q96A84 441 aaPredicted RBP13.69□□□□□ -0.22
PCCB-203ENST00000462542 C17orf80Q9BSJ5 609 aa13.69□□□□□ -0.22
PCCB-203ENST00000462542 FSD1Q9BTV5 496 aa13.69□□□□□ -0.22
PCCB-203ENST00000462542 FRMPD2Q68DX3 1309 aaPredicted RBP13.68□□□□□ -0.22
PCCB-203ENST00000462542 TRIOO75962 3097 aa13.68□□□□□ -0.22
PCCB-203ENST00000462542 PPFIA4O75335 1185 aa13.68□□□□□ -0.22
PCCB-203ENST00000462542 EIF3JO75822 258 aaKnown RBP13.68□□□□□ -0.22
PCCB-203ENST00000462542 PDHBP11177 359 aa13.68□□□□□ -0.22
PCCB-203ENST00000462542 ZP2Q05996 745 aa13.68□□□□□ -0.22
PCCB-203ENST00000462542 ZNF543Q08ER8 600 aa13.68□□□□□ -0.22
PCCB-203ENST00000462542 GPM6BQ13491 265 aa13.68□□□□□ -0.22
PCCB-203ENST00000462542 COL19A1Q14993 1142 aa13.68□□□□□ -0.22
PCCB-203ENST00000462542 TCTN1Q2MV58 587 aa13.68□□□□□ -0.22
PCCB-203ENST00000462542 TRIM71Q2Q1W2 868 aaKnown RBP13.68□□□□□ -0.22
PCCB-203ENST00000462542 TSHZ3Q63HK5 1081 aa13.68□□□□□ -0.22
PCCB-203ENST00000462542 TRAF7Q6Q0C0 670 aa13.68□□□□□ -0.22
PCCB-203ENST00000462542 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.68□□□□□ -0.22
PCCB-203ENST00000462542 CHST3Q7LGC8 479 aa13.68□□□□□ -0.22
PCCB-203ENST00000462542 ADHFE1Q8IWW8 467 aa13.68□□□□□ -0.22
PCCB-203ENST00000462542 DDX41Q9UJV9 622 aaKnown RBP13.68□□□□□ -0.22
PCCB-203ENST00000462542 H3BQ06 376 aaPredicted RBP13.67□□□□□ -0.22
PCCB-203ENST00000462542 HAS3O00219 553 aa13.67□□□□□ -0.22
PCCB-203ENST00000462542 MFSD10Q14728 455 aa13.67□□□□□ -0.22
PCCB-203ENST00000462542 KIAA0753Q2KHM9 967 aa13.67□□□□□ -0.22
PCCB-203ENST00000462542 GPATCH4Q5T3I0 446 aaKnown RBP13.67□□□□□ -0.22
PCCB-203ENST00000462542 MCF2L2Q86YR7 1114 aa13.67□□□□□ -0.22
PCCB-203ENST00000462542 MYOCDQ8IZQ8 938 aa13.67□□□□□ -0.22
PCCB-203ENST00000462542 DBF4BQ8NFT6 615 aa13.67□□□□□ -0.22
PCCB-203ENST00000462542 PPTC7Q8NI37 304 aa13.67□□□□□ -0.22
PCCB-203ENST00000462542 ALG1Q9BT22 464 aa13.67□□□□□ -0.22
PCCB-203ENST00000462542 NSUN3Q9H649 340 aaKnown RBP13.67□□□□□ -0.22
PCCB-203ENST00000462542 TOMM22Q9NS69 142 aa13.67□□□□□ -0.22
PCCB-203ENST00000462542 RSPH10B2B2RC85 870 aa13.66□□□□□ -0.22
PCCB-203ENST00000462542 FOXP2O15409 715 aa13.66□□□□□ -0.22
PCCB-203ENST00000462542 F2P00734 622 aa13.66□□□□□ -0.22
PCCB-203ENST00000462542 RSPH10BP0C881 870 aa13.66□□□□□ -0.22
PCCB-203ENST00000462542 SNHG28P0DPA3 235 aa13.66□□□□□ -0.22
PCCB-203ENST00000462542 MKRN4PQ13434 485 aaPredicted RBP13.66□□□□□ -0.22
PCCB-203ENST00000462542 MBTPS1Q14703 1052 aa13.66□□□□□ -0.22
PCCB-203ENST00000462542 PLEKHG4Q58EX7 1191 aa13.66□□□□□ -0.22
PCCB-203ENST00000462542 TCEAL5Q5H9L2 206 aa13.66□□□□□ -0.22
PCCB-203ENST00000462542 DHX37Q8IY37 1157 aaKnown RBP13.66□□□□□ -0.22
PCCB-203ENST00000462542 TMEM192Q8IY95 271 aa13.66□□□□□ -0.22
PCCB-203ENST00000462542 TOP1MTQ969P6 601 aa13.66□□□□□ -0.22
PCCB-203ENST00000462542 TAAR1Q96RJ0 339 aa13.66□□□□□ -0.22
PCCB-203ENST00000462542 RMDN3Q96TC7 470 aa13.66□□□□□ -0.22
PCCB-203ENST00000462542 POP1Q99575 1024 aaKnown RBP13.66□□□□□ -0.22
PCCB-203ENST00000462542 RB1P06400 928 aa13.65□□□□□ -0.22
PCCB-203ENST00000462542 PCP11498 1178 aaKnown RBP13.65□□□□□ -0.22
PCCB-203ENST00000462542 THPOP40225 353 aa13.65□□□□□ -0.22
PCCB-203ENST00000462542 PKN1Q16512 942 aa13.65□□□□□ -0.22
PCCB-203ENST00000462542 USH1GQ495M9 461 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms