RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 METTL16Q86W50 562 aaKnown RBP7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 CHD1LQ86WJ1 897 aa7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 NCAPG2Q86XI2 1143 aa7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 SMAP1Q8IYB5 467 aaPredicted RBP7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 TEX11Q8IYF3 940 aa7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 ABRAQ8N0Z2 381 aa7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 CRACR2BQ8N4Y2 399 aaPredicted RBP7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 PCSK9Q8NBP7 692 aaKnown RBP7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 ZNF384Q8TF68 577 aa7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 ATOH1Q92858 354 aaPredicted RBP7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 VWCEQ96DN2 955 aa7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 ZNF512BQ96KM6 892 aaPredicted RBP7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 RPAP3Q9H6T3 665 aaPredicted RBP7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 DNAJC18Q9H819 358 aa7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 ECHDC1Q9NTX5 307 aa7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 HMG20BQ9P0W2 317 aa7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 GMPR2Q9P2T1 348 aaKnown RBP7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 FAM184BQ9ULE4 1060 aa7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 TPRP12270 2363 aaKnown RBP7.09□□□□□ -1.28
SMARCC1-204ENST00000462198 CHD8Q9HCK8 2581 aa7.09□□□□□ -1.28
SMARCC1-204ENST00000462198 PDS5AQ29RF7 1337 aaKnown RBP7.08□□□□□ -1.28
SMARCC1-204ENST00000462198 SOWAHDA6NJG2 315 aa7.08□□□□□ -1.28
SMARCC1-204ENST00000462198 USP17L12C9JPN9 530 aa7.08□□□□□ -1.28
SMARCC1-204ENST00000462198 USP17L21D6R901 530 aa7.08□□□□□ -1.28
SMARCC1-204ENST00000462198 DUSP11O75319 330 aaKnown RBP7.08□□□□□ -1.28
SMARCC1-204ENST00000462198 AVPP01185 164 aa7.08□□□□□ -1.28
SMARCC1-204ENST00000462198 GH2P01242 217 aa7.08□□□□□ -1.28
SMARCC1-204ENST00000462198 PGK2P07205 417 aa7.08□□□□□ -1.28
SMARCC1-204ENST00000462198 C6orf222P0C671 652 aaPredicted RBP7.08□□□□□ -1.28
SMARCC1-204ENST00000462198 ATP5JP18859 108 aa7.08□□□□□ -1.28
SMARCC1-204ENST00000462198 MX1P20591 662 aa7.08□□□□□ -1.28
SMARCC1-204ENST00000462198 IRS1P35568 1242 aa7.08□□□□□ -1.28
SMARCC1-204ENST00000462198 PKN1Q16512 942 aa7.08□□□□□ -1.28
SMARCC1-204ENST00000462198 GNASQ5JWF2 1037 aa7.08□□□□□ -1.28
SMARCC1-204ENST00000462198 L1TD1Q5T7N2 865 aaKnown RBP7.08□□□□□ -1.28
SMARCC1-204ENST00000462198 PI16Q6UXB8 463 aa7.08□□□□□ -1.28
SMARCC1-204ENST00000462198 CENPQQ7L2Z9 268 aaPredicted RBP7.08□□□□□ -1.28
SMARCC1-204ENST00000462198 SPRED2Q7Z698 418 aa7.08□□□□□ -1.28
SMARCC1-204ENST00000462198 RETREG3Q86VR2 466 aa7.08□□□□□ -1.28
SMARCC1-204ENST00000462198 PHOSPHO2Q8TCD6 241 aa7.08□□□□□ -1.28
SMARCC1-204ENST00000462198 ACER1Q8TDN7 264 aa7.08□□□□□ -1.28
SMARCC1-204ENST00000462198 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.08□□□□□ -1.28
SMARCC1-204ENST00000462198 CLP1Q92989 425 aaKnown RBP7.08□□□□□ -1.28
SMARCC1-204ENST00000462198 SCLYQ96I15 445 aa7.08□□□□□ -1.28
SMARCC1-204ENST00000462198 DNAJC2Q99543 621 aaKnown RBP7.08□□□□□ -1.28
SMARCC1-204ENST00000462198 NOC4LQ9BVI4 516 aaKnown RBP7.08□□□□□ -1.28
SMARCC1-204ENST00000462198 PRR14Q9BWN1 585 aa7.08□□□□□ -1.28
SMARCC1-204ENST00000462198 KIAA1683Q9H0B3 1180 aa7.08□□□□□ -1.28
SMARCC1-204ENST00000462198 IRF2BPLQ9H1B7 796 aa7.08□□□□□ -1.28
SMARCC1-204ENST00000462198 LRP2BPQ9P2M1 347 aa7.08□□□□□ -1.28
SMARCC1-204ENST00000462198 DACH1Q9UI36 760 aa7.08□□□□□ -1.28
SMARCC1-204ENST00000462198 CNPY2Q9Y2B0 182 aa7.08□□□□□ -1.28
SMARCC1-204ENST00000462198 TTC41PQ6P2S7 1318 aa7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 SIPA1L1O43166 1804 aa7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 FOCADQ5VW36 1801 aa7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 ZNF16P17020 682 aaPredicted RBP7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 CST5P28325 142 aaPredicted RBP7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 ZAP70P43403 619 aa7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 GSTO1P78417 241 aa7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 ZP2Q05996 745 aa7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 TTF1Q15361 905 aaPredicted RBP7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 NFKBIBQ15653 356 aa7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 ZNF792Q3KQV3 632 aa7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 CRTC2Q53ET0 693 aaPredicted RBP7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 UTP14CQ5TAP6 766 aaKnown RBP7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 ASCL5Q7RTU5 278 aa7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 DEFB128Q7Z7B8 93 aa7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 FAM174AQ8TBP5 190 aa7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 NEK9Q8TD19 979 aa7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 OTUD7AQ8TE49 926 aaPredicted RBP7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 SH3RF3Q8TEJ3 882 aaPredicted RBP7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 TGFBRAP1Q8WUH2 860 aa7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 EDAQ92838 391 aa7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 MRRFQ96E11 262 aaKnown RBP7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 MMP19Q99542 508 aa7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 TRPV6Q9H1D0 765 aa7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 WNT8AQ9H1J5 351 aa7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 BOLA2Q9H3K6 86 aa7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 SUGCTQ9HAC7 445 aa7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 SPC25Q9HBM1 224 aa7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 RAI14Q9P0K7 980 aa7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 PRKAG3Q9UGI9 489 aa7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 MUTYHQ9UIF7 546 aa7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 PALD1Q9ULE6 856 aa7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 DIS3Q9Y2L1 958 aaKnown RBP7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 PCDHB3Q9Y5E6 796 aa7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 DCHS1Q96JQ0 3298 aa7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 PLXNA3P51805 1871 aa7.07□□□□□ -1.28
SMARCC1-204ENST00000462198 SCN5AQ14524 2016 aa7.06□□□□□ -1.28
SMARCC1-204ENST00000462198 MYH1P12882 1939 aa7.06□□□□□ -1.28
SMARCC1-204ENST00000462198 TMEM221A6NGB7 291 aa7.06□□□□□ -1.28
SMARCC1-204ENST00000462198 PROB1E7EW31 1015 aa7.06□□□□□ -1.28
SMARCC1-204ENST00000462198 H3BQ06 376 aaPredicted RBP7.06□□□□□ -1.28
SMARCC1-204ENST00000462198 M0R296 226 aa7.06□□□□□ -1.28
SMARCC1-204ENST00000462198 GOLIM4O00461 696 aa7.06□□□□□ -1.28
SMARCC1-204ENST00000462198 IDH1O75874 414 aaKnown RBP7.06□□□□□ -1.28
SMARCC1-204ENST00000462198 SNAI1O95863 264 aaPredicted RBP7.06□□□□□ -1.28
SMARCC1-204ENST00000462198 CYP2E1P05181 493 aaPredicted RBP7.06□□□□□ -1.28
SMARCC1-204ENST00000462198 ACTN1P12814 892 aa7.06□□□□□ -1.28
SMARCC1-204ENST00000462198 PDE1AP54750 535 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms