RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 MRE11P49959 708 aa10.15□□□□□ -0.78
VPS50-207ENST00000458530 TOB1P50616 345 aaPredicted RBP10.15□□□□□ -0.78
VPS50-207ENST00000458530 ATP2C1P98194 919 aaPredicted RBP10.15□□□□□ -0.78
VPS50-207ENST00000458530 ZRSR1Q15695 479 aaKnown RBP10.15□□□□□ -0.78
VPS50-207ENST00000458530 ZYXQ15942 572 aaKnown RBP10.15□□□□□ -0.78
VPS50-207ENST00000458530 RESP18Q5W5W9 173 aa10.15□□□□□ -0.78
VPS50-207ENST00000458530 TYW1BQ6NUM6 668 aa10.15□□□□□ -0.78
VPS50-207ENST00000458530 NEK8Q86SG6 692 aa10.15□□□□□ -0.78
VPS50-207ENST00000458530 ERO1BQ86YB8 467 aa10.15□□□□□ -0.78
VPS50-207ENST00000458530 SPICE1Q8N0Z3 855 aa10.15□□□□□ -0.78
VPS50-207ENST00000458530 ZNF280CQ8ND82 737 aa10.15□□□□□ -0.78
VPS50-207ENST00000458530 DPF3Q92784 378 aa10.15□□□□□ -0.78
VPS50-207ENST00000458530 COA7Q96BR5 231 aa10.15□□□□□ -0.78
VPS50-207ENST00000458530 TIGD1Q96MW7 591 aa10.15□□□□□ -0.78
VPS50-207ENST00000458530 NUP88Q99567 741 aaPredicted RBP10.15□□□□□ -0.78
VPS50-207ENST00000458530 PSTPIP2Q9H939 334 aa10.15□□□□□ -0.78
VPS50-207ENST00000458530 USP25Q9UHP3 1055 aa10.15□□□□□ -0.78
VPS50-207ENST00000458530 PRR12Q9ULL5 1215 aa10.15□□□□□ -0.78
VPS50-207ENST00000458530 PCDHB6Q9Y5E3 794 aa10.15□□□□□ -0.78
VPS50-207ENST00000458530 ABCB11O95342 1321 aa10.14□□□□□ -0.79
VPS50-207ENST00000458530 FAM237AA0A1B0GTK4 181 aa10.14□□□□□ -0.79
VPS50-207ENST00000458530 IRF6O14896 467 aa10.14□□□□□ -0.79
VPS50-207ENST00000458530 NR1I2O75469 434 aa10.14□□□□□ -0.79
VPS50-207ENST00000458530 CAVIN2O95810 425 aa10.14□□□□□ -0.79
VPS50-207ENST00000458530 MYCP01106 439 aaPredicted RBP10.14□□□□□ -0.79
VPS50-207ENST00000458530 CCL5P13501 91 aa10.14□□□□□ -0.79
VPS50-207ENST00000458530 PFKFB1P16118 471 aa10.14□□□□□ -0.79
VPS50-207ENST00000458530 CAPN2P17655 700 aa10.14□□□□□ -0.79
VPS50-207ENST00000458530 PTPRAP18433 802 aa10.14□□□□□ -0.79
VPS50-207ENST00000458530 INPP5BP32019 993 aa10.14□□□□□ -0.79
VPS50-207ENST00000458530 GRK4P32298 578 aa10.14□□□□□ -0.79
VPS50-207ENST00000458530 PRPHP41219 470 aa10.14□□□□□ -0.79
VPS50-207ENST00000458530 SYKP43405 635 aa10.14□□□□□ -0.79
VPS50-207ENST00000458530 MOGSQ13724 837 aa10.14□□□□□ -0.79
VPS50-207ENST00000458530 KIF22Q14807 665 aa10.14□□□□□ -0.79
VPS50-207ENST00000458530 AXDND1Q5T1B0 1012 aaPredicted RBP10.14□□□□□ -0.79
VPS50-207ENST00000458530 KANK3Q6NY19 840 aa10.14□□□□□ -0.79
VPS50-207ENST00000458530 POTEEQ6S8J3 1075 aa10.14□□□□□ -0.79
VPS50-207ENST00000458530 PRPF38AQ8NAV1 312 aaKnown RBP10.14□□□□□ -0.79
VPS50-207ENST00000458530 BBXQ8WY36 941 aaPredicted RBP10.14□□□□□ -0.79
VPS50-207ENST00000458530 ANP32BQ92688 251 aaKnown RBP10.14□□□□□ -0.79
VPS50-207ENST00000458530 LRCH3Q96II8 777 aa10.14□□□□□ -0.79
VPS50-207ENST00000458530 C12orf42Q96LP6 360 aa10.14□□□□□ -0.79
VPS50-207ENST00000458530 SLF1Q9BQI6 1058 aa10.14□□□□□ -0.79
VPS50-207ENST00000458530 TANGO6Q9C0B7 1094 aa10.14□□□□□ -0.79
VPS50-207ENST00000458530 RANBP17Q9H2T7 1088 aaKnown RBP10.14□□□□□ -0.79
VPS50-207ENST00000458530 TMOD4Q9NZQ9 345 aa10.14□□□□□ -0.79
VPS50-207ENST00000458530 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.14□□□□□ -0.79
VPS50-207ENST00000458530 FBXO2Q9UK22 296 aaPredicted RBP10.14□□□□□ -0.79
VPS50-207ENST00000458530 MRPL11Q9Y3B7 192 aaKnown RBP10.14□□□□□ -0.79
VPS50-207ENST00000458530 NR2E3Q9Y5X4 410 aa10.14□□□□□ -0.79
VPS50-207ENST00000458530 FSD2A1L4K1 749 aa10.13□□□□□ -0.79
VPS50-207ENST00000458530 SPDYE3A6NKU9 549 aa10.13□□□□□ -0.79
VPS50-207ENST00000458530 NEMFO60524 1076 aa10.13□□□□□ -0.79
VPS50-207ENST00000458530 OSBPP22059 807 aa10.13□□□□□ -0.79
VPS50-207ENST00000458530 MCM7P33993 719 aa10.13□□□□□ -0.79
VPS50-207ENST00000458530 BMP8BP34820 402 aa10.13□□□□□ -0.79
VPS50-207ENST00000458530 LONP1P36776 959 aaKnown RBP10.13□□□□□ -0.79
VPS50-207ENST00000458530 BACE1P56817 501 aa10.13□□□□□ -0.79
VPS50-207ENST00000458530 PTGDRQ13258 359 aa10.13□□□□□ -0.79
VPS50-207ENST00000458530 PPIL2Q13356 520 aa10.13□□□□□ -0.79
VPS50-207ENST00000458530 SNAPC2Q13487 334 aa10.13□□□□□ -0.79
VPS50-207ENST00000458530 MTMR2Q13614 643 aa10.13□□□□□ -0.79
VPS50-207ENST00000458530 ZNF174Q15697 407 aa10.13□□□□□ -0.79
VPS50-207ENST00000458530 INF2Q27J81 1249 aa10.13□□□□□ -0.79
VPS50-207ENST00000458530 EARS2Q5JPH6 523 aaKnown RBP10.13□□□□□ -0.79
VPS50-207ENST00000458530 SASS6Q6UVJ0 657 aa10.13□□□□□ -0.79
VPS50-207ENST00000458530 FMR1NBQ8N0W7 255 aaPredicted RBP10.13□□□□□ -0.79
VPS50-207ENST00000458530 SAMD3Q8N6K7 520 aa10.13□□□□□ -0.79
VPS50-207ENST00000458530 ENGASEQ8NFI3 743 aa10.13□□□□□ -0.79
VPS50-207ENST00000458530 RASGRP4Q8TDF6 673 aa10.13□□□□□ -0.79
VPS50-207ENST00000458530 TBCKQ8TEA7 893 aa10.13□□□□□ -0.79
VPS50-207ENST00000458530 U2AF1L4Q8WU68 220 aaKnown RBP10.13□□□□□ -0.79
VPS50-207ENST00000458530 KIFC2Q96AC6 838 aa10.13□□□□□ -0.79
VPS50-207ENST00000458530 GDF15Q99988 308 aa10.13□□□□□ -0.79
VPS50-207ENST00000458530 SDF4Q9BRK5 362 aa10.13□□□□□ -0.79
VPS50-207ENST00000458530 RAB34Q9BZG1 259 aa10.13□□□□□ -0.79
VPS50-207ENST00000458530 UNC80Q8N2C7 3258 aa10.13□□□□□ -0.79
VPS50-207ENST00000458530 MYPNQ86TC9 1320 aa10.12□□□□□ -0.79
VPS50-207ENST00000458530 RLFQ13129 1914 aa10.12□□□□□ -0.79
VPS50-207ENST00000458530 LOXHD1Q8IVV2 1947 aa10.12□□□□□ -0.79
VPS50-207ENST00000458530 A0A1B0GVL5 298 aa10.12□□□□□ -0.79
VPS50-207ENST00000458530 PIK3CDO00329 1044 aa10.12□□□□□ -0.79
VPS50-207ENST00000458530 CCNT1O60563 726 aaKnown RBP10.12□□□□□ -0.79
VPS50-207ENST00000458530 PPP1R11O60927 126 aaPredicted RBP10.12□□□□□ -0.79
VPS50-207ENST00000458530 ZBED4O75132 1171 aa10.12□□□□□ -0.79
VPS50-207ENST00000458530 FLOT1O75955 427 aa10.12□□□□□ -0.79
VPS50-207ENST00000458530 ZNF202O95125 648 aa10.12□□□□□ -0.79
VPS50-207ENST00000458530 ICAM1P05362 532 aa10.12□□□□□ -0.79
VPS50-207ENST00000458530 OR52Z1P0C646 297 aa10.12□□□□□ -0.79
VPS50-207ENST00000458530 DEKP35659 375 aaKnown RBP10.12□□□□□ -0.79
VPS50-207ENST00000458530 PSMC4P43686 418 aa10.12□□□□□ -0.79
VPS50-207ENST00000458530 CLK2P49760 499 aaKnown RBP10.12□□□□□ -0.79
VPS50-207ENST00000458530 NDUFA8P51970 172 aa10.12□□□□□ -0.79
VPS50-207ENST00000458530 SPP2Q13103 211 aa10.12□□□□□ -0.79
VPS50-207ENST00000458530 TMEM266Q2M3C6 531 aa10.12□□□□□ -0.79
VPS50-207ENST00000458530 LETM2Q2VYF4 491 aa10.12□□□□□ -0.79
VPS50-207ENST00000458530 USH1GQ495M9 461 aa10.12□□□□□ -0.79
VPS50-207ENST00000458530 JAKMIP3Q5VZ66 844 aa10.12□□□□□ -0.79
VPS50-207ENST00000458530 MOXD1Q6UVY6 613 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms