RNA–Protein interactions for RNA: ENST00000449811.5

CPSF7-207, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-207ENST00000449811 CTNNA3Q9UI47 895 aa16.14■□□□□ 0.17
CPSF7-207ENST00000449811 INSL6Q9Y581 213 aa16.14■□□□□ 0.17
CPSF7-207ENST00000449811 FRMPD2Q68DX3 1309 aaPredicted RBP16.14■□□□□ 0.17
CPSF7-207ENST00000449811 POTEB3A0JP26 581 aa16.13■□□□□ 0.17
CPSF7-207ENST00000449811 CASTP20810 708 aaKnown RBP16.13■□□□□ 0.17
CPSF7-207ENST00000449811 POTEBQ6S5H4 581 aa16.13■□□□□ 0.17
CPSF7-207ENST00000449811 GH1P01241 217 aa16.12■□□□□ 0.17
CPSF7-207ENST00000449811 ZP2Q05996 745 aa16.12■□□□□ 0.17
CPSF7-207ENST00000449811 ARHGAP1Q07960 439 aa16.12■□□□□ 0.17
CPSF7-207ENST00000449811 LY6KQ17RY6 165 aa16.12■□□□□ 0.17
CPSF7-207ENST00000449811 TIGD5Q53EQ6 642 aa16.12■□□□□ 0.17
CPSF7-207ENST00000449811 CCDC62Q6P9F0 684 aa16.12■□□□□ 0.17
CPSF7-207ENST00000449811 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.12■□□□□ 0.17
CPSF7-207ENST00000449811 CHST3Q7LGC8 479 aa16.12■□□□□ 0.17
CPSF7-207ENST00000449811 C7orf31Q8N865 590 aa16.12■□□□□ 0.17
CPSF7-207ENST00000449811 SNX27Q96L92 541 aa16.12■□□□□ 0.17
CPSF7-207ENST00000449811 HDAC6Q9UBN7 1215 aa16.12■□□□□ 0.17
CPSF7-207ENST00000449811 FAM50BQ9Y247 325 aa16.12■□□□□ 0.17
CPSF7-207ENST00000449811 LGR5O75473 907 aa16.11■□□□□ 0.17
CPSF7-207ENST00000449811 TOP1P11387 765 aaKnown RBP16.11■□□□□ 0.17
CPSF7-207ENST00000449811 PTK7Q13308 1070 aa16.11■□□□□ 0.17
CPSF7-207ENST00000449811 DGKDQ16760 1214 aa16.11■□□□□ 0.17
CPSF7-207ENST00000449811 ZNF618Q5T7W0 954 aa16.11■□□□□ 0.17
CPSF7-207ENST00000449811 EP400NLQ6ZTU2 488 aa16.11■□□□□ 0.17
CPSF7-207ENST00000449811 SEPT14Q6ZU15 432 aa16.11■□□□□ 0.17
CPSF7-207ENST00000449811 MYOCDQ8IZQ8 938 aa16.11■□□□□ 0.17
CPSF7-207ENST00000449811 BANK1Q8NDB2 785 aa16.11■□□□□ 0.17
CPSF7-207ENST00000449811 PABPC5Q96DU9 382 aaKnown RBP16.11■□□□□ 0.17
CPSF7-207ENST00000449811 TMEM47Q9BQJ4 181 aa16.11■□□□□ 0.17
CPSF7-207ENST00000449811 PRKAG3Q9UGI9 489 aa16.11■□□□□ 0.17
CPSF7-207ENST00000449811 WDR19Q8NEZ3 1342 aa16.11■□□□□ 0.17
CPSF7-207ENST00000449811 RBAK-RBAKDNI3L0D1 243 aa16.1■□□□□ 0.17
CPSF7-207ENST00000449811 FOXP2O15409 715 aa16.1■□□□□ 0.17
CPSF7-207ENST00000449811 AMHP03971 560 aa16.1■□□□□ 0.17
CPSF7-207ENST00000449811 PSEN2P49810 448 aa16.1■□□□□ 0.17
CPSF7-207ENST00000449811 HTRA4P83105 476 aaPredicted RBP16.1■□□□□ 0.17
CPSF7-207ENST00000449811 MBTPS1Q14703 1052 aa16.1■□□□□ 0.17
CPSF7-207ENST00000449811 TRIM71Q2Q1W2 868 aaKnown RBP16.1■□□□□ 0.17
CPSF7-207ENST00000449811 EPC2Q52LR7 807 aa16.1■□□□□ 0.17
CPSF7-207ENST00000449811 TCEAL5Q5H9L2 206 aa16.1■□□□□ 0.17
CPSF7-207ENST00000449811 ZMYM1Q5SVZ6 1142 aa16.1■□□□□ 0.17
CPSF7-207ENST00000449811 TRAF7Q6Q0C0 670 aa16.1■□□□□ 0.17
CPSF7-207ENST00000449811 HFE2Q6ZVN8 426 aa16.1■□□□□ 0.17
CPSF7-207ENST00000449811 SAMD11Q96NU1 681 aa16.1■□□□□ 0.17
CPSF7-207ENST00000449811 ALG1Q9BT22 464 aa16.1■□□□□ 0.17
CPSF7-207ENST00000449811 FSD1Q9BTV5 496 aa16.1■□□□□ 0.17
CPSF7-207ENST00000449811 KATNAL1Q9BW62 490 aa16.1■□□□□ 0.17
CPSF7-207ENST00000449811 ORC4O43929 436 aa16.09■□□□□ 0.17
CPSF7-207ENST00000449811 PDHBP11177 359 aa16.09■□□□□ 0.17
CPSF7-207ENST00000449811 MFSD10Q14728 455 aa16.09■□□□□ 0.17
CPSF7-207ENST00000449811 USH1GQ495M9 461 aa16.09■□□□□ 0.17
CPSF7-207ENST00000449811 ADHFE1Q8IWW8 467 aa16.09■□□□□ 0.17
CPSF7-207ENST00000449811 RGS22Q8NE09 1264 aa16.09■□□□□ 0.17
CPSF7-207ENST00000449811 SP7Q8TDD2 431 aaPredicted RBP16.09■□□□□ 0.17
CPSF7-207ENST00000449811 WNT8BQ93098 351 aa16.09■□□□□ 0.17
CPSF7-207ENST00000449811 TOMM22Q9NS69 142 aa16.09■□□□□ 0.17
CPSF7-207ENST00000449811 ANAPC4Q9UJX5 808 aa16.09■□□□□ 0.17
CPSF7-207ENST00000449811 EMSYQ7Z589 1322 aa16.09■□□□□ 0.17
CPSF7-207ENST00000449811 C19orf67A6NJJ6 358 aa16.08■□□□□ 0.16
CPSF7-207ENST00000449811 H3BNC9 293 aa16.08■□□□□ 0.16
CPSF7-207ENST00000449811 ZNF543Q08ER8 600 aa16.08■□□□□ 0.16
CPSF7-207ENST00000449811 MKRN4PQ13434 485 aaPredicted RBP16.08■□□□□ 0.16
CPSF7-207ENST00000449811 GPM6BQ13491 265 aa16.08■□□□□ 0.16
CPSF7-207ENST00000449811 KIAA0753Q2KHM9 967 aa16.08■□□□□ 0.16
CPSF7-207ENST00000449811 DBF4BQ8NFT6 615 aa16.08■□□□□ 0.16
CPSF7-207ENST00000449811 MFSD14AQ96MC6 490 aa16.08■□□□□ 0.16
CPSF7-207ENST00000449811 UPF3BQ9BZI7 483 aaKnown RBP16.08■□□□□ 0.16
CPSF7-207ENST00000449811 NSUN3Q9H649 340 aaKnown RBP16.08■□□□□ 0.16
CPSF7-207ENST00000449811 CLDND1Q9NY35 253 aa16.08■□□□□ 0.16
CPSF7-207ENST00000449811 HAS3O00219 553 aa16.07■□□□□ 0.16
CPSF7-207ENST00000449811 F2P00734 622 aa16.07■□□□□ 0.16
CPSF7-207ENST00000449811 FGRP09769 529 aa16.07■□□□□ 0.16
CPSF7-207ENST00000449811 ZNF286BP0CG31 522 aa16.07■□□□□ 0.16
CPSF7-207ENST00000449811 IRS1P35568 1242 aa16.07■□□□□ 0.16
CPSF7-207ENST00000449811 ZNF200P98182 395 aaPredicted RBP16.07■□□□□ 0.16
CPSF7-207ENST00000449811 COL19A1Q14993 1142 aa16.07■□□□□ 0.16
CPSF7-207ENST00000449811 RRP12Q5JTH9 1297 aaKnown RBP16.07■□□□□ 0.16
CPSF7-207ENST00000449811 DHX37Q8IY37 1157 aaKnown RBP16.07■□□□□ 0.16
CPSF7-207ENST00000449811 NSUN6Q8TEA1 469 aaKnown RBP16.07■□□□□ 0.16
CPSF7-207ENST00000449811 ANKS1AQ92625 1134 aa16.07■□□□□ 0.16
CPSF7-207ENST00000449811 EMID1Q96A84 441 aaPredicted RBP16.07■□□□□ 0.16
CPSF7-207ENST00000449811 YME1L1Q96TA2 773 aa16.07■□□□□ 0.16
CPSF7-207ENST00000449811 DDX41Q9UJV9 622 aaKnown RBP16.07■□□□□ 0.16
CPSF7-207ENST00000449811 TTC41PQ6P2S7 1318 aa16.06■□□□□ 0.16
CPSF7-207ENST00000449811 THPOP40225 353 aa16.06■□□□□ 0.16
CPSF7-207ENST00000449811 STXBP2Q15833 593 aa16.06■□□□□ 0.16
CPSF7-207ENST00000449811 FBXO11Q86XK2 927 aa16.06■□□□□ 0.16
CPSF7-207ENST00000449811 TMEM192Q8IY95 271 aa16.06■□□□□ 0.16
CPSF7-207ENST00000449811 PPTC7Q8NI37 304 aa16.06■□□□□ 0.16
CPSF7-207ENST00000449811 TAAR1Q96RJ0 339 aa16.06■□□□□ 0.16
CPSF7-207ENST00000449811 IWS1Q96ST2 819 aa16.06■□□□□ 0.16
CPSF7-207ENST00000449811 TCP11L1Q9NUJ3 509 aa16.06■□□□□ 0.16
CPSF7-207ENST00000449811 C5orf42Q9H799 3197 aa16.06■□□□□ 0.16
CPSF7-207ENST00000449811 RSPH10B2B2RC85 870 aa16.05■□□□□ 0.16
CPSF7-207ENST00000449811 RSPH10BP0C881 870 aa16.05■□□□□ 0.16
CPSF7-207ENST00000449811 SNHG28P0DPA3 235 aa16.05■□□□□ 0.16
CPSF7-207ENST00000449811 LAMC2Q13753 1193 aa16.05■□□□□ 0.16
CPSF7-207ENST00000449811 PLEKHG4Q58EX7 1191 aa16.05■□□□□ 0.16
CPSF7-207ENST00000449811 VPS53Q5VIR6 699 aa16.05■□□□□ 0.16
CPSF7-207ENST00000449811 PI4K2BQ8TCG2 481 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms