RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 ID4P47928 161 aa8.53□□□□□ -1.04
HDAC9-216ENST00000446646 GUCA2AQ02747 115 aa8.53□□□□□ -1.04
HDAC9-216ENST00000446646 TNFAIP2Q03169 654 aa8.53□□□□□ -1.04
HDAC9-216ENST00000446646 COL19A1Q14993 1142 aa8.53□□□□□ -1.04
HDAC9-216ENST00000446646 MSS51Q4VC12 460 aa8.53□□□□□ -1.04
HDAC9-216ENST00000446646 FAM83BQ5T0W9 1011 aa8.53□□□□□ -1.04
HDAC9-216ENST00000446646 GORABQ5T7V8 394 aa8.53□□□□□ -1.04
HDAC9-216ENST00000446646 SNRNP48Q6IEG0 339 aaKnown RBP8.53□□□□□ -1.04
HDAC9-216ENST00000446646 NOL8Q76FK4 1167 aaKnown RBP8.53□□□□□ -1.04
HDAC9-216ENST00000446646 BMP8AQ7Z5Y6 402 aa8.53□□□□□ -1.04
HDAC9-216ENST00000446646 MSL3Q8N5Y2 521 aaKnown RBP8.53□□□□□ -1.04
HDAC9-216ENST00000446646 SSH1Q8WYL5 1049 aa8.53□□□□□ -1.04
HDAC9-216ENST00000446646 TGS1Q96RS0 853 aaKnown RBP8.53□□□□□ -1.04
HDAC9-216ENST00000446646 ABHD16BQ9H3Z7 469 aa8.53□□□□□ -1.04
HDAC9-216ENST00000446646 RALYQ9UKM9 306 aaKnown RBP8.53□□□□□ -1.04
HDAC9-216ENST00000446646 TMX2Q9Y320 296 aa8.53□□□□□ -1.04
HDAC9-216ENST00000446646 ZBED9Q6R2W3 1325 aa8.53□□□□□ -1.04
HDAC9-216ENST00000446646 MYH1P12882 1939 aa8.52□□□□□ -1.04
HDAC9-216ENST00000446646 WDR46O15213 610 aaKnown RBP8.52□□□□□ -1.05
HDAC9-216ENST00000446646 PDGFBP01127 241 aaPredicted RBP8.52□□□□□ -1.05
HDAC9-216ENST00000446646 ARP10275 920 aa8.52□□□□□ -1.05
HDAC9-216ENST00000446646 DDX11Q96FC9 970 aa8.52□□□□□ -1.05
HDAC9-216ENST00000446646 CNTNAP3BQ96NU0 1288 aa8.52□□□□□ -1.05
HDAC9-216ENST00000446646 CTAGE1Q96RT6 745 aa8.52□□□□□ -1.05
HDAC9-216ENST00000446646 MEIS3Q99687 375 aa8.52□□□□□ -1.05
HDAC9-216ENST00000446646 USB1Q9BQ65 265 aaKnown RBP8.52□□□□□ -1.05
HDAC9-216ENST00000446646 DBNDD2Q9BQY9 259 aa8.52□□□□□ -1.05
HDAC9-216ENST00000446646 FSD1Q9BTV5 496 aa8.52□□□□□ -1.05
HDAC9-216ENST00000446646 CNTNAP3Q9BZ76 1288 aa8.52□□□□□ -1.05
HDAC9-216ENST00000446646 AKAP2Q9Y2D5 859 aa8.52□□□□□ -1.05
HDAC9-216ENST00000446646 ZZEF1O43149 2961 aa8.52□□□□□ -1.05
HDAC9-216ENST00000446646 CYP2D7A0A087X1C5 515 aa8.51□□□□□ -1.05
HDAC9-216ENST00000446646 CABYRO75952 493 aa8.51□□□□□ -1.05
HDAC9-216ENST00000446646 GJB5O95377 273 aa8.51□□□□□ -1.05
HDAC9-216ENST00000446646 ACTN1P12814 892 aa8.51□□□□□ -1.05
HDAC9-216ENST00000446646 GTF2F1P35269 517 aaKnown RBP eCLIP8.51□□□□□ -1.05
HDAC9-216ENST00000446646 CLK2P49760 499 aaKnown RBP8.51□□□□□ -1.05
HDAC9-216ENST00000446646 ICA1Q05084 483 aa8.51□□□□□ -1.05
HDAC9-216ENST00000446646 SLFN5Q08AF3 891 aa8.51□□□□□ -1.05
HDAC9-216ENST00000446646 SMAD2Q15796 467 aaKnown RBP8.51□□□□□ -1.05
HDAC9-216ENST00000446646 TRAF7Q6Q0C0 670 aa8.51□□□□□ -1.05
HDAC9-216ENST00000446646 EEPD1Q7L9B9 569 aa8.51□□□□□ -1.05
HDAC9-216ENST00000446646 CPXCR1Q8N123 301 aa8.51□□□□□ -1.05
HDAC9-216ENST00000446646 FBXL6Q8N531 539 aa8.51□□□□□ -1.05
HDAC9-216ENST00000446646 MAGEB6Q8N7X4 407 aa8.51□□□□□ -1.05
HDAC9-216ENST00000446646 PABPC5Q96DU9 382 aaKnown RBP8.51□□□□□ -1.05
HDAC9-216ENST00000446646 MRPL38Q96DV4 380 aaKnown RBP8.51□□□□□ -1.05
HDAC9-216ENST00000446646 PURBQ96QR8 312 aaKnown RBP8.51□□□□□ -1.05
HDAC9-216ENST00000446646 RIOK1Q9BRS2 568 aaKnown RBP8.51□□□□□ -1.05
HDAC9-216ENST00000446646 ANTXR1Q9H6X2 564 aa8.51□□□□□ -1.05
HDAC9-216ENST00000446646 RAVER2Q9HCJ3 691 aaKnown RBP8.51□□□□□ -1.05
HDAC9-216ENST00000446646 CLDND1Q9NY35 253 aa8.51□□□□□ -1.05
HDAC9-216ENST00000446646 TLR7Q9NYK1 1049 aaKnown RBP8.51□□□□□ -1.05
HDAC9-216ENST00000446646 PRKAG3Q9UGI9 489 aa8.51□□□□□ -1.05
HDAC9-216ENST00000446646 FRYQ5TBA9 3013 aa8.51□□□□□ -1.05
HDAC9-216ENST00000446646 PROB1E7EW31 1015 aa8.5□□□□□ -1.05
HDAC9-216ENST00000446646 LINC01565O15544 149 aa8.5□□□□□ -1.05
HDAC9-216ENST00000446646 SRGAP3O43295 1099 aa8.5□□□□□ -1.05
HDAC9-216ENST00000446646 MBTPS2O43462 519 aa8.5□□□□□ -1.05
HDAC9-216ENST00000446646 EEF2P13639 858 aaKnown RBP8.5□□□□□ -1.05
HDAC9-216ENST00000446646 AVPR2P30518 371 aa8.5□□□□□ -1.05
HDAC9-216ENST00000446646 ZXDAP98168 799 aa8.5□□□□□ -1.05
HDAC9-216ENST00000446646 NBPF20Q3BBV1 942 aa8.5□□□□□ -1.05
HDAC9-216ENST00000446646 OTOGLQ3ZCN5 2332 aa8.5□□□□□ -1.05
HDAC9-216ENST00000446646 TAPT1Q6NXT6 567 aa8.5□□□□□ -1.05
HDAC9-216ENST00000446646 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.5□□□□□ -1.05
HDAC9-216ENST00000446646 TMEM179Q6ZVK1 233 aa8.5□□□□□ -1.05
HDAC9-216ENST00000446646 TTC6Q86TZ1 520 aa8.5□□□□□ -1.05
HDAC9-216ENST00000446646 RPAINQ86UA6 219 aa8.5□□□□□ -1.05
HDAC9-216ENST00000446646 FBXO16Q8IX29 292 aaPredicted RBP8.5□□□□□ -1.05
HDAC9-216ENST00000446646 BANK1Q8NDB2 785 aa8.5□□□□□ -1.05
HDAC9-216ENST00000446646 SPIRE2Q8WWL2 714 aa8.5□□□□□ -1.05
HDAC9-216ENST00000446646 RMDN1Q96DB5 314 aa8.5□□□□□ -1.05
HDAC9-216ENST00000446646 ASIC4Q96FT7 647 aa8.5□□□□□ -1.05
HDAC9-216ENST00000446646 RAD9AQ99638 391 aa8.5□□□□□ -1.05
HDAC9-216ENST00000446646 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.5□□□□□ -1.05
HDAC9-216ENST00000446646 TEX13BQ9BXU2 312 aa8.5□□□□□ -1.05
HDAC9-216ENST00000446646 PTPRCP08575 1304 aa8.5□□□□□ -1.05
HDAC9-216ENST00000446646 SPEGQ15772 3267 aa8.49□□□□□ -1.05
HDAC9-216ENST00000446646 CEP295Q9C0D2 2601 aa8.49□□□□□ -1.05
HDAC9-216ENST00000446646 ZBTB24O43167 697 aaPredicted RBP8.49□□□□□ -1.05
HDAC9-216ENST00000446646 RAD21O60216 631 aa8.49□□□□□ -1.05
HDAC9-216ENST00000446646 NBNO60934 754 aa8.49□□□□□ -1.05
HDAC9-216ENST00000446646 TBX10O75333 385 aa8.49□□□□□ -1.05
HDAC9-216ENST00000446646 IDH1O75874 414 aaKnown RBP8.49□□□□□ -1.05
HDAC9-216ENST00000446646 CSPG5O95196 566 aa8.49□□□□□ -1.05
HDAC9-216ENST00000446646 POLR3DP05423 398 aaPredicted RBP8.49□□□□□ -1.05
HDAC9-216ENST00000446646 UQCRFS1P1P0C7P4 283 aa8.49□□□□□ -1.05
HDAC9-216ENST00000446646 KCNJ6P48051 423 aa8.49□□□□□ -1.05
HDAC9-216ENST00000446646 RPIAP49247 311 aa8.49□□□□□ -1.05
HDAC9-216ENST00000446646 FOXC1Q12948 553 aa8.49□□□□□ -1.05
HDAC9-216ENST00000446646 CTC1Q2NKJ3 1217 aa8.49□□□□□ -1.05
HDAC9-216ENST00000446646 ALDH1L2Q3SY69 923 aa8.49□□□□□ -1.05
HDAC9-216ENST00000446646 SLFNL1Q499Z3 407 aa8.49□□□□□ -1.05
HDAC9-216ENST00000446646 FRMD5Q7Z6J6 570 aa8.49□□□□□ -1.05
HDAC9-216ENST00000446646 SUGP1Q8IWZ8 645 aaKnown RBP8.49□□□□□ -1.05
HDAC9-216ENST00000446646 FAM133AQ8N9E0 248 aa8.49□□□□□ -1.05
HDAC9-216ENST00000446646 SDR42E1Q8WUS8 393 aa8.49□□□□□ -1.05
HDAC9-216ENST00000446646 DHX38Q92620 1227 aaKnown RBP8.49□□□□□ -1.05
HDAC9-216ENST00000446646 UPF3BQ9BZI7 483 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms