RNA–Protein interactions for RNA: ENST00000441141.5

VPS8-208, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-208ENST00000441141 ZNF445P59923 1031 aa4.9□□□□□ -1.63
VPS8-208ENST00000441141 GRB10Q13322 594 aa4.9□□□□□ -1.63
VPS8-208ENST00000441141 CPZQ66K79 652 aa4.9□□□□□ -1.63
VPS8-208ENST00000441141 FIBCD1Q8N539 461 aa4.9□□□□□ -1.63
VPS8-208ENST00000441141 BVESQ8NE79 360 aa4.9□□□□□ -1.63
VPS8-208ENST00000441141 NLGN2Q8NFZ4 835 aa4.9□□□□□ -1.63
VPS8-208ENST00000441141 MICAL1Q8TDZ2 1067 aa4.9□□□□□ -1.63
VPS8-208ENST00000441141 FGD4Q96M96 766 aa4.9□□□□□ -1.63
VPS8-208ENST00000441141 IPO9Q96P70 1041 aaKnown RBP4.9□□□□□ -1.63
VPS8-208ENST00000441141 NOL6Q9H6R4 1146 aaKnown RBP4.9□□□□□ -1.63
VPS8-208ENST00000441141 SNTG2Q9NY99 539 aa4.9□□□□□ -1.63
VPS8-208ENST00000441141 PLA2G2DQ9UNK4 145 aa4.9□□□□□ -1.63
VPS8-208ENST00000441141 CDK11AQ9UQ88 783 aaPredicted RBP4.9□□□□□ -1.63
VPS8-208ENST00000441141 H0Y8X5 98 aa4.89□□□□□ -1.63
VPS8-208ENST00000441141 MATN3O15232 486 aa4.89□□□□□ -1.63
VPS8-208ENST00000441141 SHOXO15266 292 aa4.89□□□□□ -1.63
VPS8-208ENST00000441141 FSHBP01225 129 aa4.89□□□□□ -1.63
VPS8-208ENST00000441141 L1CAMP32004 1257 aa4.89□□□□□ -1.63
VPS8-208ENST00000441141 SARSP49591 514 aaKnown RBP4.89□□□□□ -1.63
VPS8-208ENST00000441141 AMPD2Q01433 879 aa4.89□□□□□ -1.63
VPS8-208ENST00000441141 DLX2Q07687 328 aaPredicted RBP4.89□□□□□ -1.63
VPS8-208ENST00000441141 HSP90AA2PQ14568 343 aaPredicted RBP4.89□□□□□ -1.63
VPS8-208ENST00000441141 ZC3H12BQ5HYM0 836 aaKnown RBP4.89□□□□□ -1.63
VPS8-208ENST00000441141 TTLL7Q6ZT98 887 aa4.89□□□□□ -1.63
VPS8-208ENST00000441141 ARHGEF39Q8N4T4 335 aa4.89□□□□□ -1.63
VPS8-208ENST00000441141 LOXL4Q96JB6 756 aa4.89□□□□□ -1.63
VPS8-208ENST00000441141 CCDC140Q96MF4 163 aa4.89□□□□□ -1.63
VPS8-208ENST00000441141 PTCHD1Q96NR3 888 aa4.89□□□□□ -1.63
VPS8-208ENST00000441141 SAMD11Q96NU1 681 aa4.89□□□□□ -1.63
VPS8-208ENST00000441141 C1QTNF3-AMACRE9PGA6 284 aa4.88□□□□□ -1.63
VPS8-208ENST00000441141 GLI4P10075 376 aa4.88□□□□□ -1.63
VPS8-208ENST00000441141 PMLP29590 882 aa4.88□□□□□ -1.63
VPS8-208ENST00000441141 SSRP1Q08945 709 aaKnown RBP4.88□□□□□ -1.63
VPS8-208ENST00000441141 RASA3Q14644 834 aa4.88□□□□□ -1.63
VPS8-208ENST00000441141 PPP2R5DQ14738 602 aa4.88□□□□□ -1.63
VPS8-208ENST00000441141 LONRF2Q1L5Z9 754 aa4.88□□□□□ -1.63
VPS8-208ENST00000441141 SLC10A6Q3KNW5 377 aa4.88□□□□□ -1.63
VPS8-208ENST00000441141 MRM1Q6IN84 353 aaKnown RBP4.88□□□□□ -1.63
VPS8-208ENST00000441141 TTC9BQ8N6N2 239 aa4.88□□□□□ -1.63
VPS8-208ENST00000441141 SLC16A11Q8NCK7 471 aa4.88□□□□□ -1.63
VPS8-208ENST00000441141 ADCY4Q8NFM4 1077 aa4.88□□□□□ -1.63
VPS8-208ENST00000441141 BRF1Q92994 677 aa4.88□□□□□ -1.63
VPS8-208ENST00000441141 TSPAN17Q96FV3 270 aa4.88□□□□□ -1.63
VPS8-208ENST00000441141 ZDHHC15Q96MV8 337 aa4.88□□□□□ -1.63
VPS8-208ENST00000441141 RBM15Q96T37 977 aaKnown RBP eCLIP4.88□□□□□ -1.63
VPS8-208ENST00000441141 CGGBP1Q9UFW8 167 aaPredicted RBP4.88□□□□□ -1.63
VPS8-208ENST00000441141 NUDT5Q9UKK9 219 aa4.88□□□□□ -1.63
VPS8-208ENST00000441141 EMC9Q9Y3B6 208 aa4.88□□□□□ -1.63
VPS8-208ENST00000441141 IGSF3O75054 1194 aa4.87□□□□□ -1.63
VPS8-208ENST00000441141 KCNH1O95259 989 aa4.87□□□□□ -1.63
VPS8-208ENST00000441141 SLC9A5Q14940 896 aa4.87□□□□□ -1.63
VPS8-208ENST00000441141 ZNF761Q86XN6 746 aaPredicted RBP4.87□□□□□ -1.63
VPS8-208ENST00000441141 TRIM59Q8IWR1 403 aa4.87□□□□□ -1.63
VPS8-208ENST00000441141 CHST13Q8NET6 341 aa4.87□□□□□ -1.63
VPS8-208ENST00000441141 SMARCC2Q8TAQ2 1214 aa4.87□□□□□ -1.63
VPS8-208ENST00000441141 CPA5Q8WXQ8 436 aa4.87□□□□□ -1.63
VPS8-208ENST00000441141 PEX11GQ96HA9 241 aa4.87□□□□□ -1.63
VPS8-208ENST00000441141 FCRL3Q96P31 734 aaPredicted RBP4.87□□□□□ -1.63
VPS8-208ENST00000441141 SPATA9Q9BWV2 254 aa4.87□□□□□ -1.63
VPS8-208ENST00000441141 C1QTNF3Q9BXJ4 246 aa4.87□□□□□ -1.63
VPS8-208ENST00000441141 TRBV23OR9-2A0A075B6M9 112 aa4.86□□□□□ -1.63
VPS8-208ENST00000441141 SMARCA5O60264 1052 aaPredicted RBP4.86□□□□□ -1.63
VPS8-208ENST00000441141 CPP00450 1065 aa4.86□□□□□ -1.63
VPS8-208ENST00000441141 PLATP00750 562 aa4.86□□□□□ -1.63
VPS8-208ENST00000441141 APPP05067 770 aa4.86□□□□□ -1.63
VPS8-208ENST00000441141 ITGAVP06756 1048 aa4.86□□□□□ -1.63
VPS8-208ENST00000441141 CD3EP07766 207 aa4.86□□□□□ -1.63
VPS8-208ENST00000441141 ZNF20P17024 532 aa4.86□□□□□ -1.63
VPS8-208ENST00000441141 HOXC12P31275 282 aa4.86□□□□□ -1.63
VPS8-208ENST00000441141 KIAA2012Q0VF49 1180 aa4.86□□□□□ -1.63
VPS8-208ENST00000441141 THAP3Q8WTV1 239 aaPredicted RBP4.86□□□□□ -1.63
VPS8-208ENST00000441141 ZBTB8AQ96BR9 441 aa4.86□□□□□ -1.63
VPS8-208ENST00000441141 C8orf49Q96NF6 230 aa4.86□□□□□ -1.63
VPS8-208ENST00000441141 SORCS2Q96PQ0 1159 aa4.86□□□□□ -1.63
VPS8-208ENST00000441141 DNAJC7Q99615 494 aa4.86□□□□□ -1.63
VPS8-208ENST00000441141 CDC6Q99741 560 aa4.86□□□□□ -1.63
VPS8-208ENST00000441141 AARSD1Q9BTE6 412 aaKnown RBP4.86□□□□□ -1.63
VPS8-208ENST00000441141 CYP26B1Q9NR63 512 aa4.86□□□□□ -1.63
VPS8-208ENST00000441141 APEX2Q9UBZ4 518 aa4.86□□□□□ -1.63
VPS8-208ENST00000441141 TMA7Q9Y2S6 64 aaKnown RBP4.86□□□□□ -1.63
VPS8-208ENST00000441141 KDM2BQ8NHM5 1336 aa4.86□□□□□ -1.63
VPS8-208ENST00000441141 TRAV20A0A0B4J274 112 aa4.85□□□□□ -1.63
VPS8-208ENST00000441141 CCDC163A0A0D9SF12 145 aa4.85□□□□□ -1.63
VPS8-208ENST00000441141 FAM221BA6H8Z2 402 aa4.85□□□□□ -1.63
VPS8-208ENST00000441141 ZBTB7AO95365 584 aa4.85□□□□□ -1.63
VPS8-208ENST00000441141 SEPHS1P49903 392 aa4.85□□□□□ -1.63
VPS8-208ENST00000441141 CACNB2Q08289 660 aaPredicted RBP4.85□□□□□ -1.63
VPS8-208ENST00000441141 EEF1DP3Q658K8 133 aa4.85□□□□□ -1.63
VPS8-208ENST00000441141 GTF2IRD2BQ6EKJ0 949 aa4.85□□□□□ -1.63
VPS8-208ENST00000441141 BORAQ6PGQ7 559 aa4.85□□□□□ -1.63
VPS8-208ENST00000441141 GTF2IRD2Q86UP8 949 aa4.85□□□□□ -1.63
VPS8-208ENST00000441141 FAM124AQ86V42 546 aa4.85□□□□□ -1.63
VPS8-208ENST00000441141 ZNF227Q86WZ6 799 aa4.85□□□□□ -1.63
VPS8-208ENST00000441141 LZTR1Q8N653 840 aa4.85□□□□□ -1.63
VPS8-208ENST00000441141 ZNF513Q8N8E2 541 aaPredicted RBP4.85□□□□□ -1.63
VPS8-208ENST00000441141 ZSWIM2Q8NEG5 633 aa4.85□□□□□ -1.63
VPS8-208ENST00000441141 ADAMTS17Q8TE56 1095 aa4.85□□□□□ -1.63
VPS8-208ENST00000441141 MRGPRX3Q96LB0 322 aa4.85□□□□□ -1.63
VPS8-208ENST00000441141 BCAS3Q9H6U6 928 aa4.85□□□□□ -1.63
VPS8-208ENST00000441141 RXFP1Q9HBX9 757 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms