RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 TMEM266Q2M3C6 531 aa14.78□□□□□ -0.04
ACTN4-204ENST00000440400 MICALL2Q8IY33 904 aa14.78□□□□□ -0.04
ACTN4-204ENST00000440400 CCDC150Q8NCX0 1101 aa14.78□□□□□ -0.04
ACTN4-204ENST00000440400 RAB34Q9BZG1 259 aa14.78□□□□□ -0.04
ACTN4-204ENST00000440400 TRIM9Q9C026 710 aa14.78□□□□□ -0.04
ACTN4-204ENST00000440400 NFE2L3Q9Y4A8 694 aa14.78□□□□□ -0.04
ACTN4-204ENST00000440400 ABCB11O95342 1321 aa14.78□□□□□ -0.04
ACTN4-204ENST00000440400 PPP1R2P41236 205 aa14.77□□□□□ -0.04
ACTN4-204ENST00000440400 GYS2P54840 703 aa14.77□□□□□ -0.04
ACTN4-204ENST00000440400 NR1I3Q14994 352 aa14.77□□□□□ -0.04
ACTN4-204ENST00000440400 LIMA1Q9UHB6 759 aaKnown RBP14.77□□□□□ -0.04
ACTN4-204ENST00000440400 STK24Q9Y6E0 443 aa14.77□□□□□ -0.04
ACTN4-204ENST00000440400 RPTORQ8N122 1335 aa14.77□□□□□ -0.04
ACTN4-204ENST00000440400 LMOD1P29536 600 aaPredicted RBP14.77□□□□□ -0.05
ACTN4-204ENST00000440400 CDC25AP30304 524 aa14.77□□□□□ -0.05
ACTN4-204ENST00000440400 FAM83BQ5T0W9 1011 aa14.77□□□□□ -0.05
ACTN4-204ENST00000440400 WDR18Q9BV38 432 aa14.77□□□□□ -0.05
ACTN4-204ENST00000440400 USP17L15C9J2P7 530 aa14.77□□□□□ -0.05
ACTN4-204ENST00000440400 USP17L13C9JLJ4 530 aa14.77□□□□□ -0.05
ACTN4-204ENST00000440400 USP17L11C9JVI0 530 aa14.77□□□□□ -0.05
ACTN4-204ENST00000440400 USP17L18D6R9N7 530 aa14.77□□□□□ -0.05
ACTN4-204ENST00000440400 USP17L22D6RA61 530 aa14.77□□□□□ -0.05
ACTN4-204ENST00000440400 USP17L17D6RBQ6 530 aa14.77□□□□□ -0.05
ACTN4-204ENST00000440400 USP17L19D6RCP7 530 aa14.77□□□□□ -0.05
ACTN4-204ENST00000440400 USP17L20D6RJB6 530 aa14.77□□□□□ -0.05
ACTN4-204ENST00000440400 WDR46O15213 610 aaKnown RBP14.77□□□□□ -0.05
ACTN4-204ENST00000440400 USP17L24Q0WX57 530 aa14.77□□□□□ -0.05
ACTN4-204ENST00000440400 USP17L6PQ6QN14 398 aa14.77□□□□□ -0.05
ACTN4-204ENST00000440400 SLFN12Q8IYM2 578 aa14.77□□□□□ -0.05
ACTN4-204ENST00000440400 NLGN2Q8NFZ4 835 aa14.77□□□□□ -0.05
ACTN4-204ENST00000440400 NEK11Q8NG66 645 aa14.77□□□□□ -0.05
ACTN4-204ENST00000440400 PVALEFA0A1B0GWK0 134 aa14.76□□□□□ -0.05
ACTN4-204ENST00000440400 ARHGAP4P98171 946 aa14.76□□□□□ -0.05
ACTN4-204ENST00000440400 FBXO38Q6PIJ6 1188 aa14.76□□□□□ -0.05
ACTN4-204ENST00000440400 DRC7Q8IY82 874 aa14.76□□□□□ -0.05
ACTN4-204ENST00000440400 RAD54LQ92698 747 aa14.76□□□□□ -0.05
ACTN4-204ENST00000440400 BLZF1Q9H2G9 400 aa14.76□□□□□ -0.05
ACTN4-204ENST00000440400 LRWD1Q9UFC0 647 aa14.76□□□□□ -0.05
ACTN4-204ENST00000440400 CNOT7Q9UIV1 285 aaKnown RBP14.76□□□□□ -0.05
ACTN4-204ENST00000440400 ZNF536O15090 1300 aa14.76□□□□□ -0.05
ACTN4-204ENST00000440400 PITPNM2Q9BZ72 1349 aa14.76□□□□□ -0.05
ACTN4-204ENST00000440400 KDM3AQ9Y4C1 1321 aa14.76□□□□□ -0.05
ACTN4-204ENST00000440400 PTPRFP10586 1907 aa14.76□□□□□ -0.05
ACTN4-204ENST00000440400 IGLV3-22A0A075B6J6 115 aa14.76□□□□□ -0.05
ACTN4-204ENST00000440400 MYCNP04198 464 aaPredicted RBP14.76□□□□□ -0.05
ACTN4-204ENST00000440400 HSD17B4P51659 736 aa14.76□□□□□ -0.05
ACTN4-204ENST00000440400 ARMCX5Q6P1M9 558 aa14.76□□□□□ -0.05
ACTN4-204ENST00000440400 APOBEC3FQ8IUX4 373 aaKnown RBP14.76□□□□□ -0.05
ACTN4-204ENST00000440400 MAF1Q9H063 256 aa14.76□□□□□ -0.05
ACTN4-204ENST00000440400 HACL1Q9UJ83 578 aa14.76□□□□□ -0.05
ACTN4-204ENST00000440400 ZNF215Q9UL58 517 aaPredicted RBP14.76□□□□□ -0.05
ACTN4-204ENST00000440400 BCS1LQ9Y276 419 aa14.76□□□□□ -0.05
ACTN4-204ENST00000440400 COL11A1P12107 1806 aaPredicted RBP14.75□□□□□ -0.05
ACTN4-204ENST00000440400 TRIM66O15016 1216 aa14.75□□□□□ -0.05
ACTN4-204ENST00000440400 KIF4BQ2VIQ3 1234 aa14.75□□□□□ -0.05
ACTN4-204ENST00000440400 NOL9Q5SY16 702 aaKnown RBP14.75□□□□□ -0.05
ACTN4-204ENST00000440400 C10orf67Q8IYJ2 551 aa14.75□□□□□ -0.05
ACTN4-204ENST00000440400 CALML4Q96GE6 196 aa14.75□□□□□ -0.05
ACTN4-204ENST00000440400 C12orf42Q96LP6 360 aa14.75□□□□□ -0.05
ACTN4-204ENST00000440400 FAM20AQ96MK3 541 aa14.75□□□□□ -0.05
ACTN4-204ENST00000440400 ITIH6Q6UXX5 1313 aa14.75□□□□□ -0.05
ACTN4-204ENST00000440400 TXKP42681 527 aa14.75□□□□□ -0.05
ACTN4-204ENST00000440400 UBASH3AP57075 661 aa14.75□□□□□ -0.05
ACTN4-204ENST00000440400 AMPD3Q01432 767 aa14.75□□□□□ -0.05
ACTN4-204ENST00000440400 ELF2Q15723 593 aa14.75□□□□□ -0.05
ACTN4-204ENST00000440400 MAP3K20Q9NYL2 800 aaKnown RBP14.75□□□□□ -0.05
ACTN4-204ENST00000440400 SMCHD1A6NHR9 2005 aa14.75□□□□□ -0.05
ACTN4-204ENST00000440400 PAK1Q13153 545 aa14.75□□□□□ -0.05
ACTN4-204ENST00000440400 TPD52L1Q16890 204 aaPredicted RBP14.75□□□□□ -0.05
ACTN4-204ENST00000440400 GPC2Q8N158 579 aa14.75□□□□□ -0.05
ACTN4-204ENST00000440400 HOOK2Q96ED9 719 aa14.75□□□□□ -0.05
ACTN4-204ENST00000440400 DHTKD1Q96HY7 919 aaPredicted RBP14.75□□□□□ -0.05
ACTN4-204ENST00000440400 GLIS2Q9BZE0 524 aaPredicted RBP14.75□□□□□ -0.05
ACTN4-204ENST00000440400 LRRC27Q9C0I9 530 aa14.75□□□□□ -0.05
ACTN4-204ENST00000440400 ADD3Q9UEY8 706 aaKnown RBP14.75□□□□□ -0.05
ACTN4-204ENST00000440400 VAV3Q9UKW4 847 aa14.75□□□□□ -0.05
ACTN4-204ENST00000440400 ICAM1P05362 532 aa14.74□□□□□ -0.05
ACTN4-204ENST00000440400 PRCPP42785 496 aa14.74□□□□□ -0.05
ACTN4-204ENST00000440400 FECHP22830 423 aa14.74□□□□□ -0.05
ACTN4-204ENST00000440400 ECM1Q16610 540 aa14.74□□□□□ -0.05
ACTN4-204ENST00000440400 MIGA2Q7L4E1 593 aa14.74□□□□□ -0.05
ACTN4-204ENST00000440400 ZNF397Q8NF99 534 aaPredicted RBP14.74□□□□□ -0.05
ACTN4-204ENST00000440400 SAMSN1Q9NSI8 373 aaKnown RBP14.74□□□□□ -0.05
ACTN4-204ENST00000440400 GPRC5DQ9NZD1 345 aa14.74□□□□□ -0.05
ACTN4-204ENST00000440400 PNMA2Q9UL42 364 aa14.74□□□□□ -0.05
ACTN4-204ENST00000440400 FRMD3A2A2Y4 597 aa14.73□□□□□ -0.05
ACTN4-204ENST00000440400 POLR3GO15318 223 aaPredicted RBP14.73□□□□□ -0.05
ACTN4-204ENST00000440400 UNC13DQ70J99 1090 aa14.73□□□□□ -0.05
ACTN4-204ENST00000440400 TRMT44Q8IYL2 757 aaKnown RBP14.73□□□□□ -0.05
ACTN4-204ENST00000440400 NOC3LQ8WTT2 800 aaKnown RBP14.73□□□□□ -0.05
ACTN4-204ENST00000440400 CTAGE1Q96RT6 745 aa14.73□□□□□ -0.05
ACTN4-204ENST00000440400 NT5C3AQ9H0P0 336 aa14.73□□□□□ -0.05
ACTN4-204ENST00000440400 MRPL11Q9Y3B7 192 aaKnown RBP14.73□□□□□ -0.05
ACTN4-204ENST00000440400 RABGAP1Q9Y3P9 1069 aa14.73□□□□□ -0.05
ACTN4-204ENST00000440400 ASTN2O75129 1339 aaPredicted RBP14.73□□□□□ -0.05
ACTN4-204ENST00000440400 CYP2C19P33261 490 aa14.73□□□□□ -0.05
ACTN4-204ENST00000440400 B3GNT9Q6UX72 402 aa14.73□□□□□ -0.05
ACTN4-204ENST00000440400 EP400NLQ6ZTU2 488 aa14.73□□□□□ -0.05
ACTN4-204ENST00000440400 LARP4BQ92615 738 aaKnown RBP14.73□□□□□ -0.05
ACTN4-204ENST00000440400 STAMQ92783 540 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms