RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.59□□□□□ -0.23
RTN4-211ENST00000438462 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.58□□□□□ -0.24
RTN4-211ENST00000438462 SPTLC1O15269 473 aa13.58□□□□□ -0.24
RTN4-211ENST00000438462 DUSP28Q4G0W2 176 aa13.58□□□□□ -0.24
RTN4-211ENST00000438462 KIAA1211Q6ZU35 1233 aa13.58□□□□□ -0.24
RTN4-211ENST00000438462 SPATA5Q8NB90 893 aa13.58□□□□□ -0.24
RTN4-211ENST00000438462 OR6J1Q8NGC5 347 aa13.58□□□□□ -0.24
RTN4-211ENST00000438462 ATP8B4Q8TF62 1192 aa13.58□□□□□ -0.24
RTN4-211ENST00000438462 SH2D4AQ9H788 454 aa13.58□□□□□ -0.24
RTN4-211ENST00000438462 FBXL21Q9UKT6 434 aa13.58□□□□□ -0.24
RTN4-211ENST00000438462 PLXNA4Q9HCM2 1894 aa13.58□□□□□ -0.24
RTN4-211ENST00000438462 ADGRA3Q8IWK6 1321 aa13.58□□□□□ -0.24
RTN4-211ENST00000438462 DSPP15924 2871 aaKnown RBP13.57□□□□□ -0.24
RTN4-211ENST00000438462 ITPR1Q14643 2758 aa13.57□□□□□ -0.24
RTN4-211ENST00000438462 ASB14A6NK59 587 aa13.57□□□□□ -0.24
RTN4-211ENST00000438462 PER2O15055 1255 aa13.57□□□□□ -0.24
RTN4-211ENST00000438462 DYNLL1P63167 89 aaKnown RBP13.57□□□□□ -0.24
RTN4-211ENST00000438462 SPECC1Q5M775 1068 aa13.57□□□□□ -0.24
RTN4-211ENST00000438462 ZNF618Q5T7W0 954 aa13.57□□□□□ -0.24
RTN4-211ENST00000438462 CPXCR1Q8N123 301 aa13.57□□□□□ -0.24
RTN4-211ENST00000438462 CLP1Q92989 425 aaKnown RBP13.57□□□□□ -0.24
RTN4-211ENST00000438462 IL17RAQ96F46 866 aa13.57□□□□□ -0.24
RTN4-211ENST00000438462 TLE6Q9H808 572 aa13.57□□□□□ -0.24
RTN4-211ENST00000438462 GPR108Q9NPR9 543 aa13.57□□□□□ -0.24
RTN4-211ENST00000438462 ANKFY1Q9P2R3 1169 aa13.57□□□□□ -0.24
RTN4-211ENST00000438462 STK25O00506 426 aa13.56□□□□□ -0.24
RTN4-211ENST00000438462 ICA1Q05084 483 aa13.56□□□□□ -0.24
RTN4-211ENST00000438462 FAM83BQ5T0W9 1011 aa13.56□□□□□ -0.24
RTN4-211ENST00000438462 TMEM179Q6ZVK1 233 aa13.56□□□□□ -0.24
RTN4-211ENST00000438462 SIAH1Q8IUQ4 282 aa13.56□□□□□ -0.24
RTN4-211ENST00000438462 C1orf210Q8IVY1 113 aa13.56□□□□□ -0.24
RTN4-211ENST00000438462 HNRNPABQ99729 332 aaKnown RBP13.56□□□□□ -0.24
RTN4-211ENST00000438462 POMKQ9H5K3 350 aa13.56□□□□□ -0.24
RTN4-211ENST00000438462 MYO5AQ9Y4I1 1855 aaKnown RBP13.56□□□□□ -0.24
RTN4-211ENST00000438462 LCTP09848 1927 aa13.56□□□□□ -0.24
RTN4-211ENST00000438462 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.55□□□□□ -0.24
RTN4-211ENST00000438462 CIAO1O76071 339 aa13.55□□□□□ -0.24
RTN4-211ENST00000438462 ITGB1P05556 798 aa13.55□□□□□ -0.24
RTN4-211ENST00000438462 RFX1P22670 979 aa13.55□□□□□ -0.24
RTN4-211ENST00000438462 USP5P45974 858 aa13.55□□□□□ -0.24
RTN4-211ENST00000438462 PLCD1P51178 756 aa13.55□□□□□ -0.24
RTN4-211ENST00000438462 TIMM10P62072 90 aa13.55□□□□□ -0.24
RTN4-211ENST00000438462 TBC1D8BQ0IIM8 1120 aa13.55□□□□□ -0.24
RTN4-211ENST00000438462 TTC6Q86TZ1 520 aa13.55□□□□□ -0.24
RTN4-211ENST00000438462 ADAM32Q8TC27 787 aa13.55□□□□□ -0.24
RTN4-211ENST00000438462 WNT8BQ93098 351 aa13.55□□□□□ -0.24
RTN4-211ENST00000438462 PLVAPQ9BX97 442 aa13.55□□□□□ -0.24
RTN4-211ENST00000438462 RNF216Q9NWF9 866 aaPredicted RBP13.55□□□□□ -0.24
RTN4-211ENST00000438462 LIMD1Q9UGP4 676 aa13.55□□□□□ -0.24
RTN4-211ENST00000438462 FBXO40Q9UH90 709 aa13.55□□□□□ -0.24
RTN4-211ENST00000438462 EMSYQ7Z589 1322 aa13.55□□□□□ -0.24
RTN4-211ENST00000438462 TMEM8BA6NDV4 472 aa13.54□□□□□ -0.24
RTN4-211ENST00000438462 POTEMA6NI47 508 aa13.54□□□□□ -0.24
RTN4-211ENST00000438462 TECP42680 631 aa13.54□□□□□ -0.24
RTN4-211ENST00000438462 MVPQ14764 893 aaKnown RBP13.54□□□□□ -0.24
RTN4-211ENST00000438462 PLEKHG4Q58EX7 1191 aa13.54□□□□□ -0.24
RTN4-211ENST00000438462 ANKRD54Q6NXT1 300 aa13.54□□□□□ -0.24
RTN4-211ENST00000438462 SYCE2Q6PIF2 218 aa13.54□□□□□ -0.24
RTN4-211ENST00000438462 POTEGQ6S5H5 508 aa13.54□□□□□ -0.24
RTN4-211ENST00000438462 TDRD5Q8NAT2 981 aaKnown RBP13.54□□□□□ -0.24
RTN4-211ENST00000438462 SPPL3Q8TCT6 385 aa13.54□□□□□ -0.24
RTN4-211ENST00000438462 POF1BQ8WVV4 589 aa13.54□□□□□ -0.24
RTN4-211ENST00000438462 DDX1Q92499 740 aaKnown RBP13.54□□□□□ -0.24
RTN4-211ENST00000438462 XAGE2Q96GT9 111 aa13.54□□□□□ -0.24
RTN4-211ENST00000438462 SLF1Q9BQI6 1058 aa13.54□□□□□ -0.24
RTN4-211ENST00000438462 RAVER2Q9HCJ3 691 aaKnown RBP13.54□□□□□ -0.24
RTN4-211ENST00000438462 VTA1Q9NP79 307 aa13.54□□□□□ -0.24
RTN4-211ENST00000438462 HOMER2Q9NSB8 354 aa13.54□□□□□ -0.24
RTN4-211ENST00000438462 USP17L12C9JPN9 530 aa13.53□□□□□ -0.24
RTN4-211ENST00000438462 USP17L21D6R901 530 aa13.53□□□□□ -0.24
RTN4-211ENST00000438462 ATP2A1O14983 1001 aa13.53□□□□□ -0.24
RTN4-211ENST00000438462 RAD21O60216 631 aa13.53□□□□□ -0.24
RTN4-211ENST00000438462 DCNP07585 359 aaKnown RBP13.53□□□□□ -0.24
RTN4-211ENST00000438462 EVX2Q03828 476 aa13.53□□□□□ -0.24
RTN4-211ENST00000438462 SPEM2Q0P670 501 aa13.53□□□□□ -0.24
RTN4-211ENST00000438462 TRIM71Q2Q1W2 868 aaKnown RBP13.53□□□□□ -0.24
RTN4-211ENST00000438462 BRDTQ58F21 947 aaPredicted RBP13.53□□□□□ -0.24
RTN4-211ENST00000438462 SESTD1Q86VW0 696 aa13.53□□□□□ -0.24
RTN4-211ENST00000438462 CHST13Q8NET6 341 aa13.53□□□□□ -0.24
RTN4-211ENST00000438462 P2RX5Q93086 422 aa13.53□□□□□ -0.24
RTN4-211ENST00000438462 KIF12Q96FN5 646 aa13.53□□□□□ -0.24
RTN4-211ENST00000438462 TMEM121BQ9BXQ6 578 aaPredicted RBP13.53□□□□□ -0.24
RTN4-211ENST00000438462 RC3H2Q9HBD1 1191 aaKnown RBP13.53□□□□□ -0.24
RTN4-211ENST00000438462 GMEB2Q9UKD1 530 aa13.53□□□□□ -0.24
RTN4-211ENST00000438462 RAD50Q92878 1312 aa13.53□□□□□ -0.24
RTN4-211ENST00000438462 ADAMTS20P59510 1910 aa13.52□□□□□ -0.24
RTN4-211ENST00000438462 KPNA6O60684 536 aa13.52□□□□□ -0.25
RTN4-211ENST00000438462 SRGAP2BP0DMP2 458 aa13.52□□□□□ -0.25
RTN4-211ENST00000438462 NCLP19338 710 aaKnown RBP13.52□□□□□ -0.25
RTN4-211ENST00000438462 GABPAQ06546 454 aa13.52□□□□□ -0.25
RTN4-211ENST00000438462 MAML2Q8IZL2 1156 aaPredicted RBP13.52□□□□□ -0.25
RTN4-211ENST00000438462 ZDHHC14Q8IZN3 488 aa13.52□□□□□ -0.25
RTN4-211ENST00000438462 WDR11Q9BZH6 1224 aa13.52□□□□□ -0.25
RTN4-211ENST00000438462 EPC1Q9H2F5 836 aa13.52□□□□□ -0.25
RTN4-211ENST00000438462 A1CFQ9NQ94 594 aaKnown RBP13.52□□□□□ -0.25
RTN4-211ENST00000438462 FBXO3Q9UK99 471 aa13.52□□□□□ -0.25
RTN4-211ENST00000438462 DUSP12Q9UNI6 340 aa13.52□□□□□ -0.25
RTN4-211ENST00000438462 COG6Q9Y2V7 657 aa13.52□□□□□ -0.25
RTN4-211ENST00000438462 PATJQ8NI35 1801 aa13.52□□□□□ -0.25
RTN4-211ENST00000438462 FSD2A1L4K1 749 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms