RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 SPDYE2BA6NHP3 402 aa16.38■□□□□ 0.21
RFTN1-203ENST00000432519 MARCH6O60337 910 aa16.38■□□□□ 0.21
RFTN1-203ENST00000432519 NPM3O75607 178 aaKnown RBP16.38■□□□□ 0.21
RFTN1-203ENST00000432519 SPDYE6P0CI01 402 aa16.38■□□□□ 0.21
RFTN1-203ENST00000432519 KCNA3P22001 575 aa16.38■□□□□ 0.21
RFTN1-203ENST00000432519 CC2D2BQ6DHV5 1058 aa16.38■□□□□ 0.21
RFTN1-203ENST00000432519 WDR59Q6PJI9 974 aa16.38■□□□□ 0.21
RFTN1-203ENST00000432519 UNC13DQ70J99 1090 aa16.38■□□□□ 0.21
RFTN1-203ENST00000432519 DEFB132Q7Z7B7 95 aa16.38■□□□□ 0.21
RFTN1-203ENST00000432519 CCDC84Q86UT8 332 aaPredicted RBP16.38■□□□□ 0.21
RFTN1-203ENST00000432519 DNAJC19Q96DA6 116 aa16.38■□□□□ 0.21
RFTN1-203ENST00000432519 SLF1Q9BQI6 1058 aa16.38■□□□□ 0.21
RFTN1-203ENST00000432519 KCNMB3Q9NPA1 279 aa16.38■□□□□ 0.21
RFTN1-203ENST00000432519 STK32BQ9NY57 414 aa16.38■□□□□ 0.21
RFTN1-203ENST00000432519 TBC1D7Q9P0N9 293 aa16.38■□□□□ 0.21
RFTN1-203ENST00000432519 FAM86B1E9PN63 330 aa16.37■□□□□ 0.21
RFTN1-203ENST00000432519 ENTPD3O75355 529 aa16.37■□□□□ 0.21
RFTN1-203ENST00000432519 SSBP05455 408 aaKnown RBP eCLIP16.37■□□□□ 0.21
RFTN1-203ENST00000432519 FAM86B2P0C5J1 330 aa16.37■□□□□ 0.21
RFTN1-203ENST00000432519 EHHADHQ08426 723 aa16.37■□□□□ 0.21
RFTN1-203ENST00000432519 RBM26Q5T8P6 1007 aaKnown RBP16.37■□□□□ 0.21
RFTN1-203ENST00000432519 CENPPQ6IPU0 288 aa16.37■□□□□ 0.21
RFTN1-203ENST00000432519 TBC1D5Q92609 795 aa16.37■□□□□ 0.21
RFTN1-203ENST00000432519 KIAA1024Q9UPX6 916 aa16.37■□□□□ 0.21
RFTN1-203ENST00000432519 REXO2Q9Y3B8 237 aaKnown RBP16.37■□□□□ 0.21
RFTN1-203ENST00000432519 PRR16Q569H4 304 aa16.37■□□□□ 0.21
RFTN1-203ENST00000432519 CNNM4Q6P4Q7 775 aa16.37■□□□□ 0.21
RFTN1-203ENST00000432519 GPIHBP1Q8IV16 184 aa16.37■□□□□ 0.21
RFTN1-203ENST00000432519 GMCL1P1Q8NEA9 526 aa16.37■□□□□ 0.21
RFTN1-203ENST00000432519 LENG9Q96B70 501 aa16.37■□□□□ 0.21
RFTN1-203ENST00000432519 NAA15Q9BXJ9 866 aaKnown RBP16.37■□□□□ 0.21
RFTN1-203ENST00000432519 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.37■□□□□ 0.21
RFTN1-203ENST00000432519 TRIM10Q9UDY6 481 aa16.37■□□□□ 0.21
RFTN1-203ENST00000432519 SHTN1A0MZ66 631 aa16.36■□□□□ 0.21
RFTN1-203ENST00000432519 MED24O75448 989 aa16.36■□□□□ 0.21
RFTN1-203ENST00000432519 BMP3P12645 472 aa16.36■□□□□ 0.21
RFTN1-203ENST00000432519 CASQ1P31415 396 aa16.36■□□□□ 0.21
RFTN1-203ENST00000432519 ARHGAP4P98171 946 aa16.36■□□□□ 0.21
RFTN1-203ENST00000432519 SYDE2Q5VT97 1194 aa16.36■□□□□ 0.21
RFTN1-203ENST00000432519 RSBN1LQ6PCB5 846 aaPredicted RBP16.36■□□□□ 0.21
RFTN1-203ENST00000432519 MIGA2Q7L4E1 593 aa16.36■□□□□ 0.21
RFTN1-203ENST00000432519 GMCL1Q96IK5 515 aa16.36■□□□□ 0.21
RFTN1-203ENST00000432519 GMLQ99445 158 aa16.36■□□□□ 0.21
RFTN1-203ENST00000432519 AMNQ9BXJ7 453 aa16.36■□□□□ 0.21
RFTN1-203ENST00000432519 RAB34Q9BZG1 259 aa16.36■□□□□ 0.21
RFTN1-203ENST00000432519 TTYH3Q9C0H2 523 aa16.36■□□□□ 0.21
RFTN1-203ENST00000432519 TMEM39BQ9GZU3 492 aa16.36■□□□□ 0.21
RFTN1-203ENST00000432519 CNTNAP1P78357 1384 aa16.36■□□□□ 0.21
RFTN1-203ENST00000432519 CBX1P83916 185 aa16.36■□□□□ 0.21
RFTN1-203ENST00000432519 SPIRE1Q08AE8 756 aa16.36■□□□□ 0.21
RFTN1-203ENST00000432519 ZYXQ15942 572 aaKnown RBP16.36■□□□□ 0.21
RFTN1-203ENST00000432519 FBXO11Q86XK2 927 aa16.36■□□□□ 0.21
RFTN1-203ENST00000432519 ZFP91Q96JP5 570 aaPredicted RBP16.36■□□□□ 0.21
RFTN1-203ENST00000432519 GLIS2Q9BZE0 524 aaPredicted RBP16.36■□□□□ 0.21
RFTN1-203ENST00000432519 BCAS3Q9H6U6 928 aa16.36■□□□□ 0.21
RFTN1-203ENST00000432519 MAGEC2Q9UBF1 373 aaPredicted RBP16.36■□□□□ 0.21
RFTN1-203ENST00000432519 PRR12Q9ULL5 1215 aa16.36■□□□□ 0.21
RFTN1-203ENST00000432519 POTEFA5A3E0 1075 aa16.35■□□□□ 0.21
RFTN1-203ENST00000432519 EPHB6O15197 1021 aa16.35■□□□□ 0.21
RFTN1-203ENST00000432519 TUBB4AP04350 444 aa16.35■□□□□ 0.21
RFTN1-203ENST00000432519 POTEIP0CG38 1075 aa16.35■□□□□ 0.21
RFTN1-203ENST00000432519 DPEP1P16444 411 aa16.35■□□□□ 0.21
RFTN1-203ENST00000432519 ARHGAP25P42331 645 aa16.35■□□□□ 0.21
RFTN1-203ENST00000432519 MTIF2P46199 727 aaKnown RBP16.35■□□□□ 0.21
RFTN1-203ENST00000432519 PSMC6P62333 389 aa16.35■□□□□ 0.21
RFTN1-203ENST00000432519 MAP3K9P80192 1104 aa16.35■□□□□ 0.21
RFTN1-203ENST00000432519 TBC1D8BQ0IIM8 1120 aa16.35■□□□□ 0.21
RFTN1-203ENST00000432519 POTEGQ6S5H5 508 aa16.35■□□□□ 0.21
RFTN1-203ENST00000432519 POTEEQ6S8J3 1075 aa16.35■□□□□ 0.21
RFTN1-203ENST00000432519 LARGE2Q8N3Y3 721 aa16.35■□□□□ 0.21
RFTN1-203ENST00000432519 CCDC51Q96ER9 411 aa16.35■□□□□ 0.21
RFTN1-203ENST00000432519 POLD4Q9HCU8 107 aa16.35■□□□□ 0.21
RFTN1-203ENST00000432519 ZNF70Q9UC06 446 aaPredicted RBP16.35■□□□□ 0.21
RFTN1-203ENST00000432519 TTLL6Q8N841 843 aa16.35■□□□□ 0.21
RFTN1-203ENST00000432519 ETNPPLQ8TBG4 499 aa16.35■□□□□ 0.21
RFTN1-203ENST00000432519 CCDC47Q96A33 483 aaKnown RBP16.35■□□□□ 0.21
RFTN1-203ENST00000432519 NOC4LQ9BVI4 516 aaKnown RBP16.35■□□□□ 0.21
RFTN1-203ENST00000432519 PVALEFA0A1B0GWK0 134 aa16.34■□□□□ 0.21
RFTN1-203ENST00000432519 A0A1W2PQC6 194 aa16.34■□□□□ 0.21
RFTN1-203ENST00000432519 BICDL2A1A5D9 508 aa16.34■□□□□ 0.21
RFTN1-203ENST00000432519 GOLGA6L9A6NEM1 432 aa16.34■□□□□ 0.21
RFTN1-203ENST00000432519 MEIS1O00470 390 aa16.34■□□□□ 0.21
RFTN1-203ENST00000432519 TPM1P09493 284 aa16.34■□□□□ 0.21
RFTN1-203ENST00000432519 GCFC2P16383 781 aaKnown RBP16.34■□□□□ 0.21
RFTN1-203ENST00000432519 COASYQ13057 564 aa16.34■□□□□ 0.21
RFTN1-203ENST00000432519 SAMD1Q6SPF0 538 aaPredicted RBP16.34■□□□□ 0.21
RFTN1-203ENST00000432519 TMTC1Q8IUR5 882 aa16.34■□□□□ 0.21
RFTN1-203ENST00000432519 CCDC155Q8N6L0 562 aa16.34■□□□□ 0.21
RFTN1-203ENST00000432519 VEZTQ9HBM0 779 aa16.34■□□□□ 0.21
RFTN1-203ENST00000432519 TADA3O75528 432 aa16.34■□□□□ 0.21
RFTN1-203ENST00000432519 DNM2P50570 870 aa16.34■□□□□ 0.21
RFTN1-203ENST00000432519 USP11P51784 963 aa16.34■□□□□ 0.21
RFTN1-203ENST00000432519 FAM83BQ5T0W9 1011 aa16.34■□□□□ 0.21
RFTN1-203ENST00000432519 CYP26C1Q6V0L0 522 aa16.34■□□□□ 0.21
RFTN1-203ENST00000432519 MBOAT7Q96N66 472 aa16.34■□□□□ 0.21
RFTN1-203ENST00000432519 DNAJC7Q99615 494 aa16.34■□□□□ 0.21
RFTN1-203ENST00000432519 ZNF446Q9NWS9 450 aa16.34■□□□□ 0.21
RFTN1-203ENST00000432519 CAPN11Q9UMQ6 739 aa16.34■□□□□ 0.21
RFTN1-203ENST00000432519 LUC7L2Q9Y383 392 aaKnown RBP16.34■□□□□ 0.21
RFTN1-203ENST00000432519 MRFAP1Q9Y605 127 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms