RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 A6NJR5 290 aa19.59■□□□□ 0.73
UBE3D-204ENST00000430071 ACRP10323 421 aa19.59■□□□□ 0.73
UBE3D-204ENST00000430071 ARHGAP1Q07960 439 aa19.59■□□□□ 0.73
UBE3D-204ENST00000430071 TTLL4Q14679 1199 aa19.59■□□□□ 0.73
UBE3D-204ENST00000430071 STXBP2Q15833 593 aa19.59■□□□□ 0.73
UBE3D-204ENST00000430071 GPR153Q6NV75 609 aa19.59■□□□□ 0.73
UBE3D-204ENST00000430071 SRBD1Q8N5C6 995 aaKnown RBP19.59■□□□□ 0.73
UBE3D-204ENST00000430071 AFG1LQ8WV93 481 aa19.59■□□□□ 0.73
UBE3D-204ENST00000430071 GPKOWQ92917 476 aaPredicted RBP eCLIP19.59■□□□□ 0.73
UBE3D-204ENST00000430071 IWS1Q96ST2 819 aa19.59■□□□□ 0.73
UBE3D-204ENST00000430071 MPHOSPH6Q99547 160 aaKnown RBP19.59■□□□□ 0.73
UBE3D-204ENST00000430071 PDCD2LQ9BRP1 358 aa19.59■□□□□ 0.73
UBE3D-204ENST00000430071 UPF3BQ9BZI7 483 aaKnown RBP19.59■□□□□ 0.73
UBE3D-204ENST00000430071 TRMT13Q9NUP7 481 aaKnown RBP19.59■□□□□ 0.73
UBE3D-204ENST00000430071 hCG_1642624A0A1W2PR95 340 aa19.58■□□□□ 0.73
UBE3D-204ENST00000430071 NKRFO15226 690 aaKnown RBP eCLIP19.58■□□□□ 0.73
UBE3D-204ENST00000430071 TLR3O15455 904 aaKnown RBP19.58■□□□□ 0.73
UBE3D-204ENST00000430071 SORBS3O60504 671 aa19.58■□□□□ 0.73
UBE3D-204ENST00000430071 MYCLP12524 364 aaPredicted RBP19.58■□□□□ 0.73
UBE3D-204ENST00000430071 NBPF20Q3BBV1 942 aa19.58■□□□□ 0.73
UBE3D-204ENST00000430071 FAM109BQ6ICB4 259 aaPredicted RBP19.58■□□□□ 0.73
UBE3D-204ENST00000430071 RUFY3Q7L099 469 aa19.58■□□□□ 0.73
UBE3D-204ENST00000430071 FCHSD1Q86WN1 690 aa19.58■□□□□ 0.73
UBE3D-204ENST00000430071 C22orf23Q9BZE7 217 aa19.58■□□□□ 0.73
UBE3D-204ENST00000430071 MAF1Q9H063 256 aa19.58■□□□□ 0.73
UBE3D-204ENST00000430071 ALDH8A1Q9H2A2 487 aaPredicted RBP19.58■□□□□ 0.73
UBE3D-204ENST00000430071 POLR3EQ9NVU0 708 aa19.58■□□□□ 0.73
UBE3D-204ENST00000430071 TANC1Q9C0D5 1861 aa19.58■□□□□ 0.72
UBE3D-204ENST00000430071 B4DLN1 442 aa19.57■□□□□ 0.72
UBE3D-204ENST00000430071 DDAH1O94760 285 aa19.57■□□□□ 0.72
UBE3D-204ENST00000430071 CYP2C9P11712 490 aa19.57■□□□□ 0.72
UBE3D-204ENST00000430071 LIFRP42702 1097 aa19.57■□□□□ 0.72
UBE3D-204ENST00000430071 CPT1AP50416 773 aa19.57■□□□□ 0.72
UBE3D-204ENST00000430071 MRPL12P52815 198 aaKnown RBP19.57■□□□□ 0.72
UBE3D-204ENST00000430071 CCL23P55773 120 aa19.57■□□□□ 0.72
UBE3D-204ENST00000430071 PGM5Q15124 567 aa19.57■□□□□ 0.72
UBE3D-204ENST00000430071 TMEM240Q5SV17 173 aa19.57■□□□□ 0.72
UBE3D-204ENST00000430071 NFXL1Q6ZNB6 911 aa19.57■□□□□ 0.72
UBE3D-204ENST00000430071 VWCEQ96DN2 955 aa19.57■□□□□ 0.72
UBE3D-204ENST00000430071 RNPC3Q96LT9 517 aaKnown RBP19.57■□□□□ 0.72
UBE3D-204ENST00000430071 MTG1Q9BT17 334 aaPredicted RBP19.57■□□□□ 0.72
UBE3D-204ENST00000430071 SPZ1Q9BXG8 430 aa19.57■□□□□ 0.72
UBE3D-204ENST00000430071 WNT8AQ9H1J5 351 aa19.57■□□□□ 0.72
UBE3D-204ENST00000430071 BCAS3Q9H6U6 928 aa19.57■□□□□ 0.72
UBE3D-204ENST00000430071 DDX41Q9UJV9 622 aaKnown RBP19.57■□□□□ 0.72
UBE3D-204ENST00000430071 CDH23Q9H251 3354 aa19.57■□□□□ 0.72
UBE3D-204ENST00000430071 RBM25P49756 843 aaKnown RBP19.57■□□□□ 0.72
UBE3D-204ENST00000430071 CCDC82Q8N4S0 544 aa19.57■□□□□ 0.72
UBE3D-204ENST00000430071 MAP3K14Q99558 947 aa19.57■□□□□ 0.72
UBE3D-204ENST00000430071 KIF2CQ99661 725 aa19.57■□□□□ 0.72
UBE3D-204ENST00000430071 NOC4LQ9BVI4 516 aaKnown RBP19.57■□□□□ 0.72
UBE3D-204ENST00000430071 HIPK3Q9H422 1215 aa19.57■□□□□ 0.72
UBE3D-204ENST00000430071 CYP46A1Q9Y6A2 500 aa19.57■□□□□ 0.72
UBE3D-204ENST00000430071 PTPRSQ13332 1948 aa19.56■□□□□ 0.72
UBE3D-204ENST00000430071 EYSQ5T1H1 3165 aa19.56■□□□□ 0.72
UBE3D-204ENST00000430071 CCDC69A6NI79 296 aa19.56■□□□□ 0.72
UBE3D-204ENST00000430071 GCOM1H8Y6P7 765 aaPredicted RBP19.56■□□□□ 0.72
UBE3D-204ENST00000430071 EIF3JO75822 258 aaKnown RBP19.56■□□□□ 0.72
UBE3D-204ENST00000430071 GH1P01241 217 aa19.56■□□□□ 0.72
UBE3D-204ENST00000430071 MMP3P08254 477 aa19.56■□□□□ 0.72
UBE3D-204ENST00000430071 POLR2MP0CAP2 368 aa19.56■□□□□ 0.72
UBE3D-204ENST00000430071 CHMP4BP1P59074 171 aa19.56■□□□□ 0.72
UBE3D-204ENST00000430071 SP2Q02086 613 aa19.56■□□□□ 0.72
UBE3D-204ENST00000430071 USP17L6PQ6QN14 398 aa19.56■□□□□ 0.72
UBE3D-204ENST00000430071 Q6ZUG5 572 aa19.56■□□□□ 0.72
UBE3D-204ENST00000430071 ZNF365Q70YC5 407 aa19.56■□□□□ 0.72
UBE3D-204ENST00000430071 VSIG10LQ86VR7 867 aa19.56■□□□□ 0.72
UBE3D-204ENST00000430071 CTCFLQ8NI51 663 aaPredicted RBP19.56■□□□□ 0.72
UBE3D-204ENST00000430071 KAT2BQ92831 832 aa19.56■□□□□ 0.72
UBE3D-204ENST00000430071 GUCD1Q96NT3 240 aa19.56■□□□□ 0.72
UBE3D-204ENST00000430071 UPF2Q9HAU5 1272 aaKnown RBP19.56■□□□□ 0.72
UBE3D-204ENST00000430071 GRXCR1A8MXD5 290 aa19.55■□□□□ 0.72
UBE3D-204ENST00000430071 FAM47CQ5HY64 1035 aa19.55■□□□□ 0.72
UBE3D-204ENST00000430071 SGMS1Q86VZ5 419 aa19.55■□□□□ 0.72
UBE3D-204ENST00000430071 TMTC2Q8N394 836 aa19.55■□□□□ 0.72
UBE3D-204ENST00000430071 SCLYQ96I15 445 aa19.55■□□□□ 0.72
UBE3D-204ENST00000430071 TBC1D32Q96NH3 1257 aa19.55■□□□□ 0.72
UBE3D-204ENST00000430071 AGXT2Q9BYV1 514 aa19.55■□□□□ 0.72
UBE3D-204ENST00000430071 BRPF3Q9ULD4 1205 aa19.55■□□□□ 0.72
UBE3D-204ENST00000430071 CHD9Q3L8U1 2897 aa19.55■□□□□ 0.72
UBE3D-204ENST00000430071 PRUNE2Q8WUY3 3088 aa19.54■□□□□ 0.72
UBE3D-204ENST00000430071 MRPS9P82933 396 aaKnown RBP19.54■□□□□ 0.72
UBE3D-204ENST00000430071 PPIGQ13427 754 aaKnown RBP eCLIP19.54■□□□□ 0.72
UBE3D-204ENST00000430071 FBXL16Q8N461 479 aa19.54■□□□□ 0.72
UBE3D-204ENST00000430071 BRF1Q92994 677 aa19.54■□□□□ 0.72
UBE3D-204ENST00000430071 RRP36Q96EU6 259 aaKnown RBP19.54■□□□□ 0.72
UBE3D-204ENST00000430071 TTYH1Q9H313 450 aaPredicted RBP19.54■□□□□ 0.72
UBE3D-204ENST00000430071 MAP3K20Q9NYL2 800 aaKnown RBP19.54■□□□□ 0.72
UBE3D-204ENST00000430071 MRVI1Q9Y6F6 885 aa19.54■□□□□ 0.72
UBE3D-204ENST00000430071 MEIS2O14770 477 aa19.53■□□□□ 0.72
UBE3D-204ENST00000430071 KIF5BP33176 963 aa19.53■□□□□ 0.72
UBE3D-204ENST00000430071 FGD1P98174 961 aa19.53■□□□□ 0.72
UBE3D-204ENST00000430071 TOB2Q14106 344 aaPredicted RBP19.53■□□□□ 0.72
UBE3D-204ENST00000430071 MICU3Q86XE3 530 aa19.53■□□□□ 0.72
UBE3D-204ENST00000430071 TMEM199Q8N511 208 aa19.53■□□□□ 0.72
UBE3D-204ENST00000430071 CTAGE1Q96RT6 745 aa19.53■□□□□ 0.72
UBE3D-204ENST00000430071 CXXC1Q9P0U4 656 aaPredicted RBP19.53■□□□□ 0.72
UBE3D-204ENST00000430071 TELO2Q9Y4R8 837 aa19.53■□□□□ 0.72
UBE3D-204ENST00000430071 SLC12A7Q9Y666 1083 aa19.53■□□□□ 0.72
UBE3D-204ENST00000430071 A0A0C4DFX4 3053 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms