RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 ZNF76P36508 570 aa13.31□□□□□ -0.28
PTPRN-204ENST00000423636 MATR3P43243 847 aaKnown RBP eCLIP13.31□□□□□ -0.28
PTPRN-204ENST00000423636 RNASE9P60153 205 aaKnown RBP13.31□□□□□ -0.28
PTPRN-204ENST00000423636 STIM1Q13586 685 aa13.31□□□□□ -0.28
PTPRN-204ENST00000423636 PRKG1Q13976 671 aa13.31□□□□□ -0.28
PTPRN-204ENST00000423636 FAM83BQ5T0W9 1011 aa13.31□□□□□ -0.28
PTPRN-204ENST00000423636 P2RX5Q93086 422 aa13.31□□□□□ -0.28
PTPRN-204ENST00000423636 TRAF5O00463 557 aa13.31□□□□□ -0.28
PTPRN-204ENST00000423636 ZNF185O15231 689 aa13.31□□□□□ -0.28
PTPRN-204ENST00000423636 CXCR5P32302 372 aa13.31□□□□□ -0.28
PTPRN-204ENST00000423636 KCNA1Q09470 495 aa13.31□□□□□ -0.28
PTPRN-204ENST00000423636 HERC4Q5GLZ8 1057 aaPredicted RBP13.31□□□□□ -0.28
PTPRN-204ENST00000423636 LARGE2Q8N3Y3 721 aa13.31□□□□□ -0.28
PTPRN-204ENST00000423636 GIMAP8Q8ND71 665 aaPredicted RBP13.31□□□□□ -0.28
PTPRN-204ENST00000423636 PURBQ96QR8 312 aaKnown RBP13.31□□□□□ -0.28
PTPRN-204ENST00000423636 LACRTQ9GZZ8 138 aa13.31□□□□□ -0.28
PTPRN-204ENST00000423636 RMND1Q9NWS8 449 aa13.31□□□□□ -0.28
PTPRN-204ENST00000423636 LUC7L2Q9Y383 392 aaKnown RBP13.31□□□□□ -0.28
PTPRN-204ENST00000423636 NAV1Q8NEY1 1877 aa13.31□□□□□ -0.28
PTPRN-204ENST00000423636 NHSQ6T4R5 1651 aa13.31□□□□□ -0.28
PTPRN-204ENST00000423636 MED24O75448 989 aa13.31□□□□□ -0.28
PTPRN-204ENST00000423636 PBX1P40424 430 aa13.31□□□□□ -0.28
PTPRN-204ENST00000423636 CASP5P51878 434 aa13.31□□□□□ -0.28
PTPRN-204ENST00000423636 TMEM266Q2M3C6 531 aa13.31□□□□□ -0.28
PTPRN-204ENST00000423636 DLK2Q6UY11 383 aa13.31□□□□□ -0.28
PTPRN-204ENST00000423636 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.31□□□□□ -0.28
PTPRN-204ENST00000423636 EHD2Q9NZN4 543 aa13.31□□□□□ -0.28
PTPRN-204ENST00000423636 RASSF10A6NK89 507 aa13.3□□□□□ -0.28
PTPRN-204ENST00000423636 CTTNQ14247 550 aaKnown RBP13.3□□□□□ -0.28
PTPRN-204ENST00000423636 ASPRV1Q53RT3 343 aa13.3□□□□□ -0.28
PTPRN-204ENST00000423636 C15orf52Q6ZUT6 534 aaKnown RBP13.3□□□□□ -0.28
PTPRN-204ENST00000423636 ELMO3Q96BJ8 720 aa13.3□□□□□ -0.28
PTPRN-204ENST00000423636 MTMR9Q96QG7 549 aa13.3□□□□□ -0.28
PTPRN-204ENST00000423636 CCSER1Q9C0I3 900 aa13.3□□□□□ -0.28
PTPRN-204ENST00000423636 REXO2Q9Y3B8 237 aaKnown RBP13.3□□□□□ -0.28
PTPRN-204ENST00000423636 ASTN2O75129 1339 aaPredicted RBP13.3□□□□□ -0.28
PTPRN-204ENST00000423636 UBR3Q6ZT12 1888 aa13.3□□□□□ -0.28
PTPRN-204ENST00000423636 ERICH4A6NGS2 130 aa13.3□□□□□ -0.28
PTPRN-204ENST00000423636 FAM86B1E9PN63 330 aa13.3□□□□□ -0.28
PTPRN-204ENST00000423636 PSMD14O00487 310 aa13.3□□□□□ -0.28
PTPRN-204ENST00000423636 FAM86B2P0C5J1 330 aa13.3□□□□□ -0.28
PTPRN-204ENST00000423636 PNMA6AP0CW24 399 aaPredicted RBP13.3□□□□□ -0.28
PTPRN-204ENST00000423636 NBPF9Q3BBW0 867 aa13.3□□□□□ -0.28
PTPRN-204ENST00000423636 CTAGE1Q96RT6 745 aa13.3□□□□□ -0.28
PTPRN-204ENST00000423636 PI4KBQ9UBF8 816 aa13.3□□□□□ -0.28
PTPRN-204ENST00000423636 SCN9AQ15858 1988 aa13.3□□□□□ -0.28
PTPRN-204ENST00000423636 BRWD3Q6RI45 1802 aa13.3□□□□□ -0.28
PTPRN-204ENST00000423636 CLIC2O15247 247 aa13.29□□□□□ -0.28
PTPRN-204ENST00000423636 RHOBTB3O94955 611 aa13.29□□□□□ -0.28
PTPRN-204ENST00000423636 CCDC93Q567U6 631 aa13.29□□□□□ -0.28
PTPRN-204ENST00000423636 KIAA1328Q86T90 577 aa13.29□□□□□ -0.28
PTPRN-204ENST00000423636 GPBP1Q86WP2 473 aa13.29□□□□□ -0.28
PTPRN-204ENST00000423636 LZTS2Q9BRK4 669 aa13.29□□□□□ -0.28
PTPRN-204ENST00000423636 ANO3Q9BYT9 981 aa13.29□□□□□ -0.28
PTPRN-204ENST00000423636 LIMA1Q9UHB6 759 aaKnown RBP13.29□□□□□ -0.28
PTPRN-204ENST00000423636 H7C1D1 291 aa13.29□□□□□ -0.28
PTPRN-204ENST00000423636 KIF5CO60282 957 aa13.29□□□□□ -0.28
PTPRN-204ENST00000423636 MRPL12P52815 198 aaKnown RBP13.29□□□□□ -0.28
PTPRN-204ENST00000423636 WDR59Q6PJI9 974 aa13.29□□□□□ -0.28
PTPRN-204ENST00000423636 RRAGAQ7L523 313 aa13.29□□□□□ -0.28
PTPRN-204ENST00000423636 COL24A1Q17RW2 1714 aa13.29□□□□□ -0.28
PTPRN-204ENST00000423636 ZSCAN20P17040 1043 aaPredicted RBP13.29□□□□□ -0.28
PTPRN-204ENST00000423636 NAP1L1P55209 391 aaKnown RBP13.29□□□□□ -0.28
PTPRN-204ENST00000423636 SKIDA1Q1XH10 827 aa13.29□□□□□ -0.28
PTPRN-204ENST00000423636 CCDC122Q5T0U0 273 aa13.29□□□□□ -0.28
PTPRN-204ENST00000423636 GSPT2Q8IYD1 628 aaKnown RBP13.29□□□□□ -0.28
PTPRN-204ENST00000423636 RDH13Q8NBN7 331 aa13.29□□□□□ -0.28
PTPRN-204ENST00000423636 EPN1Q9Y6I3 576 aaPredicted RBP13.29□□□□□ -0.28
PTPRN-204ENST00000423636 LAMB1P07942 1786 aa13.28□□□□□ -0.28
PTPRN-204ENST00000423636 PRPF6O94906 941 aaKnown RBP13.28□□□□□ -0.28
PTPRN-204ENST00000423636 PODNQ7Z5L7 613 aa13.28□□□□□ -0.28
PTPRN-204ENST00000423636 DAGLBQ8NCG7 672 aa13.28□□□□□ -0.28
PTPRN-204ENST00000423636 PANK4Q9NVE7 773 aa13.28□□□□□ -0.28
PTPRN-204ENST00000423636 THSD7AQ9UPZ6 1657 aa13.28□□□□□ -0.28
PTPRN-204ENST00000423636 SLX4Q8IY92 1834 aa13.28□□□□□ -0.28
PTPRN-204ENST00000423636 IGKV6D-41A0A0C4DH26 115 aa13.28□□□□□ -0.28
PTPRN-204ENST00000423636 KLRG2A4D1S0 409 aaPredicted RBP13.28□□□□□ -0.28
PTPRN-204ENST00000423636 TMEM150BA6NC51 233 aa13.28□□□□□ -0.28
PTPRN-204ENST00000423636 PEX10O60683 326 aa13.28□□□□□ -0.28
PTPRN-204ENST00000423636 RXRBP28702 533 aa13.28□□□□□ -0.28
PTPRN-204ENST00000423636 SP4Q02446 784 aa13.28□□□□□ -0.28
PTPRN-204ENST00000423636 TSR1Q2NL82 804 aaKnown RBP13.28□□□□□ -0.28
PTPRN-204ENST00000423636 CNGA4Q8IV77 575 aa13.28□□□□□ -0.28
PTPRN-204ENST00000423636 PROCA1Q8NCQ7 364 aaPredicted RBP13.28□□□□□ -0.28
PTPRN-204ENST00000423636 MAP7D2Q96T17 732 aa13.28□□□□□ -0.28
PTPRN-204ENST00000423636 L2HGDHQ9H9P8 463 aa13.28□□□□□ -0.28
PTPRN-204ENST00000423636 MLXIPQ9HAP2 919 aa13.28□□□□□ -0.28
PTPRN-204ENST00000423636 RIC8AQ9NPQ8 531 aa13.28□□□□□ -0.28
PTPRN-204ENST00000423636 CDK5RAP2Q96SN8 1893 aa13.28□□□□□ -0.28
PTPRN-204ENST00000423636 MEIS2O14770 477 aa13.28□□□□□ -0.28
PTPRN-204ENST00000423636 BUB1O43683 1085 aa13.28□□□□□ -0.28
PTPRN-204ENST00000423636 ACTN1P12814 892 aa13.28□□□□□ -0.28
PTPRN-204ENST00000423636 CCDC40Q4G0X9 1142 aa13.28□□□□□ -0.28
PTPRN-204ENST00000423636 TPH2Q8IWU9 490 aa13.28□□□□□ -0.28
PTPRN-204ENST00000423636 RAD54LQ92698 747 aa13.28□□□□□ -0.28
PTPRN-204ENST00000423636 ZDHHC15Q96MV8 337 aa13.28□□□□□ -0.28
PTPRN-204ENST00000423636 CGNQ9P2M7 1197 aaKnown RBP13.28□□□□□ -0.28
PTPRN-204ENST00000423636 LGALS16A8MUM7 142 aa13.27□□□□□ -0.28
PTPRN-204ENST00000423636 PHACTR2O75167 634 aa13.27□□□□□ -0.28
PTPRN-204ENST00000423636 NDUFA10O95299 355 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms