RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 PPM1NQ8N819 430 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 CEP120Q8N960 986 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 RUNDC1Q96C34 613 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 ARMT1Q9H993 441 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 DACT1Q9NYF0 836 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 SUSD2Q9UGT4 822 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 ITM2BQ9Y287 266 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 ATP6V0A2Q9Y487 856 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 ENO4A6NNW6 628 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 ERVV-1B6SEH8 477 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 TBCAO75347 108 aaKnown RBP3.97□□□□□ -1.77
TOP2A-201ENST00000423485 FOSP01100 380 aaPredicted RBP3.97□□□□□ -1.77
TOP2A-201ENST00000423485 GH1P01241 217 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 CPB1P15086 417 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 FLT3LGP49771 235 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 PPATQ06203 517 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 SPP2Q13103 211 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 PUM1Q14671 1186 aaKnown RBP eCLIP3.97□□□□□ -1.773e-15■□□□□ 8.3
TOP2A-201ENST00000423485 MIS18BP1Q6P0N0 1132 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 CYB5D1Q6P9G0 228 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 CCDC191Q8NCU4 936 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 NELL2Q99435 816 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 USP26Q9BXU7 913 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 SLC12A5Q9H2X9 1139 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 SRRDQ9UH36 339 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 CD207Q9UJ71 328 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 USP20Q9Y2K6 914 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 TAF6LQ9Y6J9 622 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 MGAMO43451 1857 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 METP08581 1390 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 ANKRD36BQ8N2N9 1353 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 C17orf102A2RUQ5 167 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 SMIM22K7EJ46 135 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 GRM8O00222 908 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 TRAF5O00463 557 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 SFTPCP11686 197 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 PHKG2P15735 406 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 CIITAP33076 1130 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 MCM5P33992 734 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 CRKP46108 304 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 ATP8B2P98198 1209 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 TYRO3Q06418 890 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 GABPAQ06546 454 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 PKP1Q13835 747 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 USP39Q53GS9 565 aaKnown RBP3.97□□□□□ -1.77
TOP2A-201ENST00000423485 MCTP1Q6DN14 999 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 TWF2Q6IBS0 349 aaKnown RBP3.97□□□□□ -1.77
TOP2A-201ENST00000423485 SMAP1Q8IYB5 467 aaPredicted RBP3.97□□□□□ -1.77
TOP2A-201ENST00000423485 PLBD2Q8NHP8 589 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 CHPF2Q9P2E5 772 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 ASAP1Q9ULH1 1129 aa3.97□□□□□ -1.77
TOP2A-201ENST00000423485 CNTNAP4Q9C0A0 1308 aa3.96□□□□□ -1.77
TOP2A-201ENST00000423485 ITSN1Q15811 1721 aa3.96□□□□□ -1.77
TOP2A-201ENST00000423485 JUPP14923 745 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 SP100P23497 879 aaPredicted RBP3.96□□□□□ -1.78
TOP2A-201ENST00000423485 KIF11P52732 1056 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 ST3GAL2Q16842 350 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 GPR158Q5T848 1215 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 LARP1BQ659C4 914 aaKnown RBP3.96□□□□□ -1.78
TOP2A-201ENST00000423485 MARCH10Q8NA82 808 aaPredicted RBP3.96□□□□□ -1.78
TOP2A-201ENST00000423485 ATL2Q8NHH9 583 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 SLC7A3Q8WY07 619 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 MYLIPQ8WY64 445 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 FAM49AQ9H0Q0 323 aaPredicted RBP3.96□□□□□ -1.78
TOP2A-201ENST00000423485 NKX2-4Q9H2Z4 354 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 POLMQ9NP87 494 aaPredicted RBP3.96□□□□□ -1.78
TOP2A-201ENST00000423485 NDUFB9Q9Y6M9 179 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 CCDC194A0A1B0GVG4 234 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 ESYT2A0FGR8 921 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 MAN2B1O00754 1011 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 CYP2C19P33261 490 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 THPOP40225 353 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 ADCYAP1R1P41586 468 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 USP4Q13107 963 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 SEMA3FQ13275 785 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 HNRNPDQ14103 355 aaKnown RBP3.96□□□□□ -1.78
TOP2A-201ENST00000423485 PDXDC2PQ6P474 469 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 MTSS1LQ765P7 747 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 ZNF605Q86T29 641 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 ITIH5Q86UX2 942 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 AHCYL2Q96HN2 611 aaKnown RBP3.96□□□□□ -1.78
TOP2A-201ENST00000423485 STRADBQ9C0K7 418 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 PTCH2Q9Y6C5 1203 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 TBC1D3BA6NDS4 549 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 WDR64B1ANS9 1081 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 ZNF197O14709 1029 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 TDGQ13569 410 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 STXBP2Q15833 593 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 MAPK6Q16659 721 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 WDR45BQ5MNZ6 344 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 C6orf163Q5TEZ5 329 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 SPRYD7Q5W111 196 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 PROCA1Q8NCQ7 364 aaPredicted RBP3.96□□□□□ -1.78
TOP2A-201ENST00000423485 CCDC148Q8NFR7 591 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 DNAAF4Q8WXU2 420 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 XPO6Q96QU8 1125 aaKnown RBP3.96□□□□□ -1.78
TOP2A-201ENST00000423485 USP29Q9HBJ7 922 aa3.96□□□□□ -1.78
TOP2A-201ENST00000423485 RRAGDQ9NQL2 400 aaPredicted RBP3.96□□□□□ -1.78
TOP2A-201ENST00000423485 ZNF70Q9UC06 446 aaPredicted RBP3.96□□□□□ -1.78
TOP2A-201ENST00000423485 MAP3K2Q9Y2U5 619 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms