RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 PARVGQ9HBI0 331 aa11.8□□□□□ -0.52
PTCH1-206ENST00000421141 ZNF70Q9UC06 446 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-206ENST00000421141 RPN1P04843 607 aaKnown RBP11.8□□□□□ -0.52
PTCH1-206ENST00000421141 SURF1Q15526 300 aa11.8□□□□□ -0.52
PTCH1-206ENST00000421141 SFMBT2Q5VUG0 894 aa11.8□□□□□ -0.52
PTCH1-206ENST00000421141 DISC1Q9NRI5 854 aa11.8□□□□□ -0.52
PTCH1-206ENST00000421141 CCL15-CCL14A0A0B4J2E2 113 aa11.8□□□□□ -0.52
PTCH1-206ENST00000421141 CYP2D6P10635 497 aa11.8□□□□□ -0.52
PTCH1-206ENST00000421141 LACTBP83111 547 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-206ENST00000421141 ALCAMQ13740 583 aa11.8□□□□□ -0.52
PTCH1-206ENST00000421141 CCL15Q16663 113 aa11.8□□□□□ -0.52
PTCH1-206ENST00000421141 UBE2SQ16763 222 aa11.8□□□□□ -0.52
PTCH1-206ENST00000421141 MAATS1Q7Z4T9 603 aa11.8□□□□□ -0.52
PTCH1-206ENST00000421141 MB21D1Q8N884 522 aa11.8□□□□□ -0.52
PTCH1-206ENST00000421141 GSDMBQ8TAX9 411 aa11.8□□□□□ -0.52
PTCH1-206ENST00000421141 ELF1P32519 619 aa11.79□□□□□ -0.52
PTCH1-206ENST00000421141 PDE6CP51160 858 aa11.79□□□□□ -0.52
PTCH1-206ENST00000421141 PNOCQ13519 176 aa11.79□□□□□ -0.52
PTCH1-206ENST00000421141 STMN4Q9H169 189 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-206ENST00000421141 PRDM5Q9NQX1 630 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-206ENST00000421141 ENTPD3O75355 529 aa11.79□□□□□ -0.52
PTCH1-206ENST00000421141 TUBB4AP04350 444 aa11.79□□□□□ -0.52
PTCH1-206ENST00000421141 IFNAR1P17181 557 aa11.79□□□□□ -0.52
PTCH1-206ENST00000421141 STAT1P42224 750 aa11.79□□□□□ -0.52
PTCH1-206ENST00000421141 RABL6Q3YEC7 729 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-206ENST00000421141 DEFB129Q9H1M3 183 aa11.79□□□□□ -0.52
PTCH1-206ENST00000421141 FLT1P17948 1338 aa11.79□□□□□ -0.52
PTCH1-206ENST00000421141 MYO9BQ13459 2157 aa11.79□□□□□ -0.52
PTCH1-206ENST00000421141 SYCE1Q8N0S2 351 aa11.79□□□□□ -0.52
PTCH1-206ENST00000421141 RASGRP4Q8TDF6 673 aa11.79□□□□□ -0.52
PTCH1-206ENST00000421141 STAMQ92783 540 aa11.79□□□□□ -0.52
PTCH1-206ENST00000421141 NSUN4Q96CB9 384 aaKnown RBP11.79□□□□□ -0.52
PTCH1-206ENST00000421141 SPATA33Q96N06 139 aa11.79□□□□□ -0.52
PTCH1-206ENST00000421141 TMEM47Q9BQJ4 181 aa11.79□□□□□ -0.52
PTCH1-206ENST00000421141 TBC1D22BQ9NU19 505 aa11.79□□□□□ -0.52
PTCH1-206ENST00000421141 CCDC88AQ3V6T2 1871 aa11.79□□□□□ -0.52
PTCH1-206ENST00000421141 HSF2BPO75031 334 aa11.79□□□□□ -0.52
PTCH1-206ENST00000421141 MTIF3Q9H2K0 278 aaKnown RBP11.79□□□□□ -0.52
PTCH1-206ENST00000421141 GTPBP6O43824 516 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-206ENST00000421141 CSPG5O95196 566 aa11.79□□□□□ -0.52
PTCH1-206ENST00000421141 ERCC5P28715 1186 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-206ENST00000421141 ARHGAP44Q17R89 818 aa11.79□□□□□ -0.52
PTCH1-206ENST00000421141 CTR9Q6PD62 1173 aa11.79□□□□□ -0.52
PTCH1-206ENST00000421141 ELMOD1Q8N336 334 aa11.79□□□□□ -0.52
PTCH1-206ENST00000421141 CEP112Q8N8E3 955 aa11.79□□□□□ -0.52
PTCH1-206ENST00000421141 FAM49AQ9H0Q0 323 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-206ENST00000421141 ZSWIM4Q9H7M6 989 aa11.79□□□□□ -0.52
PTCH1-206ENST00000421141 RPF1Q9H9Y2 349 aaKnown RBP11.79□□□□□ -0.52
PTCH1-206ENST00000421141 PCDHA6Q9UN73 950 aa11.79□□□□□ -0.52
PTCH1-206ENST00000421141 PCDHA8Q9Y5H6 950 aa11.79□□□□□ -0.52
PTCH1-206ENST00000421141 STAM2O75886 525 aa11.79□□□□□ -0.52
PTCH1-206ENST00000421141 VEGFAP15692 232 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-206ENST00000421141 CCDC122Q5T0U0 273 aa11.79□□□□□ -0.52
PTCH1-206ENST00000421141 CCDC127Q96BQ5 260 aa11.78□□□□□ -0.52
PTCH1-206ENST00000421141 K7ERI5 159 aa11.78□□□□□ -0.52
PTCH1-206ENST00000421141 KATNAL1Q9BW62 490 aa11.78□□□□□ -0.52
PTCH1-206ENST00000421141 SRRTQ9BXP5 876 aaKnown RBP11.78□□□□□ -0.52
PTCH1-206ENST00000421141 GINM1Q9NU53 330 aa11.78□□□□□ -0.52
PTCH1-206ENST00000421141 STK17AQ9UEE5 414 aa11.78□□□□□ -0.52
PTCH1-206ENST00000421141 SERTAD1Q9UHV2 236 aa11.78□□□□□ -0.52
PTCH1-206ENST00000421141 MYL1P05976 194 aa11.78□□□□□ -0.52
PTCH1-206ENST00000421141 ADGRF4Q8IZF3 695 aa11.78□□□□□ -0.52
PTCH1-206ENST00000421141 GPR161Q8N6U8 529 aaKnown RBP11.78□□□□□ -0.52
PTCH1-206ENST00000421141 VPS33BQ9H267 617 aa11.78□□□□□ -0.52
PTCH1-206ENST00000421141 WDR19Q8NEZ3 1342 aa11.78□□□□□ -0.52
PTCH1-206ENST00000421141 MED1Q15648 1581 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-206ENST00000421141 ZNF233A6NK53 670 aa11.78□□□□□ -0.52
PTCH1-206ENST00000421141 WDR64B1ANS9 1081 aa11.78□□□□□ -0.52
PTCH1-206ENST00000421141 NDC80O14777 642 aa11.78□□□□□ -0.52
PTCH1-206ENST00000421141 POLR2BP30876 1174 aaKnown RBP11.78□□□□□ -0.52
PTCH1-206ENST00000421141 HOXA7P31268 230 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-206ENST00000421141 LRMPQ12912 555 aa11.78□□□□□ -0.52
PTCH1-206ENST00000421141 KRT81Q14533 505 aa11.78□□□□□ -0.52
PTCH1-206ENST00000421141 CCDC26Q8TAB7 109 aa11.78□□□□□ -0.52
PTCH1-206ENST00000421141 ERCC3P19447 782 aa11.78□□□□□ -0.52
PTCH1-206ENST00000421141 HDLBPQ00341 1268 aaKnown RBP11.78□□□□□ -0.52
PTCH1-206ENST00000421141 TRIML1Q8N9V2 468 aa11.78□□□□□ -0.52
PTCH1-206ENST00000421141 TBC1D31Q96DN5 1066 aa11.78□□□□□ -0.52
PTCH1-206ENST00000421141 MTRF1LQ9UGC7 380 aaKnown RBP11.78□□□□□ -0.52
PTCH1-206ENST00000421141 PFASO15067 1338 aa11.78□□□□□ -0.52
PTCH1-206ENST00000421141 PLSCR1O15162 318 aa11.78□□□□□ -0.52
PTCH1-206ENST00000421141 WDR46O15213 610 aaKnown RBP11.78□□□□□ -0.52
PTCH1-206ENST00000421141 ANXA13P27216 316 aa11.78□□□□□ -0.52
PTCH1-206ENST00000421141 CEMIPQ8WUJ3 1361 aa11.78□□□□□ -0.52
PTCH1-206ENST00000421141 FAM151AQ8WW52 585 aa11.78□□□□□ -0.52
PTCH1-206ENST00000421141 PFKFB1P16118 471 aa11.77□□□□□ -0.52
PTCH1-206ENST00000421141 PHKA2P46019 1235 aa11.77□□□□□ -0.52
PTCH1-206ENST00000421141 FCGRTP55899 365 aa11.77□□□□□ -0.52
PTCH1-206ENST00000421141 KLHL30Q0D2K2 578 aa11.77□□□□□ -0.52
PTCH1-206ENST00000421141 ADCK5Q3MIX3 580 aa11.77□□□□□ -0.52
PTCH1-206ENST00000421141 FAM26FQ5R3K3 315 aa11.77□□□□□ -0.52
PTCH1-206ENST00000421141 LSM14BQ9BX40 385 aaKnown RBP11.77□□□□□ -0.52
PTCH1-206ENST00000421141 CGNQ9P2M7 1197 aaKnown RBP11.77□□□□□ -0.52
PTCH1-206ENST00000421141 TTLL3Q9Y4R7 772 aa11.77□□□□□ -0.52
PTCH1-206ENST00000421141 CTAGE15A4D2H0 777 aa11.77□□□□□ -0.52
PTCH1-206ENST00000421141 CTAGE8P0CG41 777 aa11.77□□□□□ -0.52
PTCH1-206ENST00000421141 SFNP31947 248 aa11.77□□□□□ -0.52
PTCH1-206ENST00000421141 SLFN12LQ6IEE8 588 aa11.77□□□□□ -0.52
PTCH1-206ENST00000421141 CTAGE6Q86UF2 777 aa11.77□□□□□ -0.52
PTCH1-206ENST00000421141 CTAGE4Q8IX94 777 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms