RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 hCG_1984214I3L0E3 225 aa9.84□□□□□ -0.83
SNCA-206ENST00000420646 NRDCO43847 1150 aa9.84□□□□□ -0.83
SNCA-206ENST00000420646 MED24O75448 989 aa9.84□□□□□ -0.83
SNCA-206ENST00000420646 KCNB1Q14721 858 aa9.84□□□□□ -0.83
SNCA-206ENST00000420646 NIM1KQ8IY84 436 aa9.84□□□□□ -0.83
SNCA-206ENST00000420646 ZNF713Q8N859 430 aaPredicted RBP9.84□□□□□ -0.83
SNCA-206ENST00000420646 ACRBPQ8NEB7 543 aa9.84□□□□□ -0.83
SNCA-206ENST00000420646 C7orf25Q9BPX7 421 aa9.84□□□□□ -0.83
SNCA-206ENST00000420646 LIMA1Q9UHB6 759 aaKnown RBP9.84□□□□□ -0.83
SNCA-206ENST00000420646 ZBTB21Q9ULJ3 1066 aa9.84□□□□□ -0.83
SNCA-206ENST00000420646 ATRNL1Q5VV63 1379 aa9.84□□□□□ -0.83
SNCA-206ENST00000420646 LRRC10BA6NIK2 292 aa9.84□□□□□ -0.83
SNCA-206ENST00000420646 ZBTB39O15060 712 aa9.84□□□□□ -0.83
SNCA-206ENST00000420646 ARHGAP6O43182 974 aa9.84□□□□□ -0.83
SNCA-206ENST00000420646 MYO1BO43795 1136 aa9.84□□□□□ -0.83
SNCA-206ENST00000420646 TFRCP02786 760 aaKnown RBP9.84□□□□□ -0.83
SNCA-206ENST00000420646 NCBP1Q09161 790 aaKnown RBP9.84□□□□□ -0.83
SNCA-206ENST00000420646 SPDYE2Q495Y8 402 aa9.84□□□□□ -0.83
SNCA-206ENST00000420646 TRMT1LQ7Z2T5 733 aaKnown RBP9.84□□□□□ -0.83
SNCA-206ENST00000420646 CCDC155Q8N6L0 562 aa9.84□□□□□ -0.83
SNCA-206ENST00000420646 FAM151AQ8WW52 585 aa9.84□□□□□ -0.83
SNCA-206ENST00000420646 RAD54LQ92698 747 aa9.84□□□□□ -0.83
SNCA-206ENST00000420646 BCS1LQ9Y276 419 aa9.84□□□□□ -0.83
SNCA-206ENST00000420646 PAXBP1Q9Y5B6 917 aa9.84□□□□□ -0.83
SNCA-206ENST00000420646 TTC26A0AVF1 554 aa9.83□□□□□ -0.84
SNCA-206ENST00000420646 H7C1D1 291 aa9.83□□□□□ -0.84
SNCA-206ENST00000420646 STX10O60499 249 aa9.83□□□□□ -0.84
SNCA-206ENST00000420646 MFAP3LO75121 409 aa9.83□□□□□ -0.84
SNCA-206ENST00000420646 STAT2P52630 851 aa9.83□□□□□ -0.84
SNCA-206ENST00000420646 NCAPH2Q6IBW4 605 aa9.83□□□□□ -0.84
SNCA-206ENST00000420646 NELFCDQ8IXH7 590 aa9.83□□□□□ -0.84
SNCA-206ENST00000420646 GMCL1P1Q8NEA9 526 aa9.83□□□□□ -0.84
SNCA-206ENST00000420646 P2RX5Q93086 422 aa9.83□□□□□ -0.84
SNCA-206ENST00000420646 GMCL1Q96IK5 515 aa9.83□□□□□ -0.84
SNCA-206ENST00000420646 CTAGE1Q96RT6 745 aa9.83□□□□□ -0.84
SNCA-206ENST00000420646 PSMD1Q99460 953 aa9.83□□□□□ -0.84
SNCA-206ENST00000420646 AGPAT5Q9NUQ2 364 aa9.83□□□□□ -0.84
SNCA-206ENST00000420646 HDAC9Q9UKV0 1011 aa9.83□□□□□ -0.84
SNCA-206ENST00000420646 GJA3Q9Y6H8 435 aa9.83□□□□□ -0.84
SNCA-206ENST00000420646 SPDYE3A6NKU9 549 aa9.83□□□□□ -0.84
SNCA-206ENST00000420646 CHMP2AO43633 222 aa9.83□□□□□ -0.84
SNCA-206ENST00000420646 KRT9P35527 623 aa9.83□□□□□ -0.84
SNCA-206ENST00000420646 GNG11P61952 73 aa9.83□□□□□ -0.84
SNCA-206ENST00000420646 ETF1P62495 437 aaKnown RBP9.83□□□□□ -0.84
SNCA-206ENST00000420646 ERVK-24P63145 666 aa9.83□□□□□ -0.84
SNCA-206ENST00000420646 RASA3Q14644 834 aa9.83□□□□□ -0.84
SNCA-206ENST00000420646 TBC1D10BQ4KMP7 808 aaPredicted RBP9.83□□□□□ -0.84
SNCA-206ENST00000420646 LENG9Q96B70 501 aa9.83□□□□□ -0.84
SNCA-206ENST00000420646 CNOT6LQ96LI5 555 aaKnown RBP9.83□□□□□ -0.84
SNCA-206ENST00000420646 TUBGCP2Q9BSJ2 902 aa9.83□□□□□ -0.84
SNCA-206ENST00000420646 RGL1Q9NZL6 768 aa9.83□□□□□ -0.84
SNCA-206ENST00000420646 PKD2L1Q9P0L9 805 aa9.83□□□□□ -0.84
SNCA-206ENST00000420646 C10orf71Q711Q0 1435 aa9.83□□□□□ -0.84
SNCA-206ENST00000420646 RASSF7Q02833 373 aa9.82□□□□□ -0.84
SNCA-206ENST00000420646 PABPC4Q13310 644 aaKnown RBP eCLIP9.82□□□□□ -0.84
SNCA-206ENST00000420646 STIM1Q13586 685 aa9.82□□□□□ -0.84
SNCA-206ENST00000420646 PDIA5Q14554 519 aa9.82□□□□□ -0.84
SNCA-206ENST00000420646 PPP1R18Q6NYC8 613 aa9.82□□□□□ -0.84
SNCA-206ENST00000420646 EPC1Q9H2F5 836 aa9.82□□□□□ -0.84
SNCA-206ENST00000420646 PIM2Q9P1W9 311 aa9.82□□□□□ -0.84
SNCA-206ENST00000420646 SFI1A8K8P3 1242 aa9.82□□□□□ -0.84
SNCA-206ENST00000420646 CTIFO43310 598 aaKnown RBP9.82□□□□□ -0.84
SNCA-206ENST00000420646 URI1O94763 535 aaPredicted RBP9.82□□□□□ -0.84
SNCA-206ENST00000420646 POLD1P28340 1107 aa9.82□□□□□ -0.84
SNCA-206ENST00000420646 AMPD3Q01432 767 aa9.82□□□□□ -0.84
SNCA-206ENST00000420646 DLK2Q6UY11 383 aa9.82□□□□□ -0.84
SNCA-206ENST00000420646 CATSPER3Q86XQ3 398 aa9.82□□□□□ -0.84
SNCA-206ENST00000420646 CPXCR1Q8N123 301 aa9.82□□□□□ -0.84
SNCA-206ENST00000420646 AGBL1Q96MI9 1066 aa9.82□□□□□ -0.84
SNCA-206ENST00000420646 RAB34Q9BZG1 259 aa9.82□□□□□ -0.84
SNCA-206ENST00000420646 IKZF4Q9H2S9 585 aa9.82□□□□□ -0.84
SNCA-206ENST00000420646 KCNMB3Q9NPA1 279 aa9.82□□□□□ -0.84
SNCA-206ENST00000420646 MYOZ2Q9NPC6 264 aa9.82□□□□□ -0.84
SNCA-206ENST00000420646 HOMER2Q9NSB8 354 aa9.82□□□□□ -0.84
SNCA-206ENST00000420646 GREB1LQ9C091 1923 aaPredicted RBP9.82□□□□□ -0.84
SNCA-206ENST00000420646 ZNF646O15015 1829 aaPredicted RBP9.82□□□□□ -0.84
SNCA-206ENST00000420646 RASSF10A6NK89 507 aa9.82□□□□□ -0.84
SNCA-206ENST00000420646 NFKBIEO00221 500 aa9.82□□□□□ -0.84
SNCA-206ENST00000420646 EML1O00423 815 aa9.82□□□□□ -0.84
SNCA-206ENST00000420646 NPM3O75607 178 aaKnown RBP9.82□□□□□ -0.84
SNCA-206ENST00000420646 CCNE1P24864 410 aa9.82□□□□□ -0.84
SNCA-206ENST00000420646 INPP5BP32019 993 aa9.82□□□□□ -0.84
SNCA-206ENST00000420646 ZNF76P36508 570 aa9.82□□□□□ -0.84
SNCA-206ENST00000420646 MTIF2P46199 727 aaKnown RBP9.82□□□□□ -0.84
SNCA-206ENST00000420646 PRELPP51888 382 aa9.82□□□□□ -0.84
SNCA-206ENST00000420646 CT47A1Q5JQC4 288 aaPredicted RBP9.82□□□□□ -0.84
SNCA-206ENST00000420646 MB21D1Q8N884 522 aa9.82□□□□□ -0.84
SNCA-206ENST00000420646 DNAJC19Q96DA6 116 aa9.82□□□□□ -0.84
SNCA-206ENST00000420646 PCMTD1Q96MG8 357 aaPredicted RBP9.82□□□□□ -0.84
SNCA-206ENST00000420646 SLF1Q9BQI6 1058 aa9.82□□□□□ -0.84
SNCA-206ENST00000420646 ABHD10Q9NUJ1 306 aa9.82□□□□□ -0.84
SNCA-206ENST00000420646 TRIM10Q9UDY6 481 aa9.82□□□□□ -0.84
SNCA-206ENST00000420646 HERC5Q9UII4 1024 aaKnown RBP9.82□□□□□ -0.84
SNCA-206ENST00000420646 TMX2Q9Y320 296 aa9.82□□□□□ -0.84
SNCA-206ENST00000420646 MSH4O15457 936 aa9.81□□□□□ -0.84
SNCA-206ENST00000420646 APBA1Q02410 837 aa9.81□□□□□ -0.84
SNCA-206ENST00000420646 SYCP1Q15431 976 aa9.81□□□□□ -0.84
SNCA-206ENST00000420646 TMEM119Q4V9L6 283 aa9.81□□□□□ -0.84
SNCA-206ENST00000420646 ANKRD20A12PQ8NF67 263 aa9.81□□□□□ -0.84
SNCA-206ENST00000420646 ETNPPLQ8TBG4 499 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms