RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 C8orf74Q6P047 294 aa16.81■□□□□ 0.28
SEMA3B-203ENST00000419007 AENQ8WTP8 325 aaKnown RBP16.81■□□□□ 0.28
SEMA3B-203ENST00000419007 SALL4Q9UJQ4 1053 aa16.81■□□□□ 0.28
SEMA3B-203ENST00000419007 MARCH6O60337 910 aa16.81■□□□□ 0.28
SEMA3B-203ENST00000419007 RASA1P20936 1047 aa16.81■□□□□ 0.28
SEMA3B-203ENST00000419007 MAGEA9P43362 315 aa16.81■□□□□ 0.28
SEMA3B-203ENST00000419007 MAN2A1Q16706 1144 aa16.81■□□□□ 0.28
SEMA3B-203ENST00000419007 TTC31Q49AM3 519 aaPredicted RBP16.81■□□□□ 0.28
SEMA3B-203ENST00000419007 PTF1AQ7RTS3 328 aa16.81■□□□□ 0.28
SEMA3B-203ENST00000419007 CCDC84Q86UT8 332 aaPredicted RBP16.81■□□□□ 0.28
SEMA3B-203ENST00000419007 KANSL2Q9H9L4 492 aa16.81■□□□□ 0.28
SEMA3B-203ENST00000419007 SIK3Q9Y2K2 1263 aa16.81■□□□□ 0.28
SEMA3B-203ENST00000419007 TCP1P17987 556 aaKnown RBP16.81■□□□□ 0.28
SEMA3B-203ENST00000419007 SLC1A4P43007 532 aa16.81■□□□□ 0.28
SEMA3B-203ENST00000419007 FIGNQ5HY92 759 aa16.81■□□□□ 0.28
SEMA3B-203ENST00000419007 CENPPQ6IPU0 288 aa16.81■□□□□ 0.28
SEMA3B-203ENST00000419007 LINC00116Q8NCU8 138 aa16.81■□□□□ 0.28
SEMA3B-203ENST00000419007 IFT81Q8WYA0 676 aa16.81■□□□□ 0.28
SEMA3B-203ENST00000419007 LARP4BQ92615 738 aaKnown RBP16.81■□□□□ 0.28
SEMA3B-203ENST00000419007 GJD4Q96KN9 370 aaPredicted RBP16.81■□□□□ 0.28
SEMA3B-203ENST00000419007 TBC1D7Q9P0N9 293 aa16.81■□□□□ 0.28
SEMA3B-203ENST00000419007 THRAP3Q9Y2W1 955 aaKnown RBP16.81■□□□□ 0.28
SEMA3B-203ENST00000419007 FRMPD2Q68DX3 1309 aaPredicted RBP16.81■□□□□ 0.28
SEMA3B-203ENST00000419007 PPP1R2P41236 205 aa16.8■□□□□ 0.28
SEMA3B-203ENST00000419007 KCTD16Q68DU8 428 aa16.8■□□□□ 0.28
SEMA3B-203ENST00000419007 PLCD3Q8N3E9 789 aa16.8■□□□□ 0.28
SEMA3B-203ENST00000419007 MMGT1Q8N4V1 131 aa16.8■□□□□ 0.28
SEMA3B-203ENST00000419007 COA7Q96BR5 231 aa16.8■□□□□ 0.28
SEMA3B-203ENST00000419007 DOT1LQ8TEK3 1739 aa16.8■□□□□ 0.28
SEMA3B-203ENST00000419007 ESYT3A0FGR9 886 aa16.8■□□□□ 0.28
SEMA3B-203ENST00000419007 IRAK1P51617 712 aa16.8■□□□□ 0.28
SEMA3B-203ENST00000419007 GNGT1P63211 74 aa16.8■□□□□ 0.28
SEMA3B-203ENST00000419007 CDK17Q00537 523 aa16.8■□□□□ 0.28
SEMA3B-203ENST00000419007 GRB10Q13322 594 aa16.8■□□□□ 0.28
SEMA3B-203ENST00000419007 BCAS4Q8TDM0 211 aa16.8■□□□□ 0.28
SEMA3B-203ENST00000419007 SNX29Q8TEQ0 813 aa16.8■□□□□ 0.28
SEMA3B-203ENST00000419007 CAPS2Q9BXY5 557 aa16.8■□□□□ 0.28
SEMA3B-203ENST00000419007 RBM12Q9NTZ6 932 aaKnown RBP16.8■□□□□ 0.28
SEMA3B-203ENST00000419007 STIM2Q9P246 746 aa16.8■□□□□ 0.28
SEMA3B-203ENST00000419007 TDP2O95551 362 aa16.8■□□□□ 0.28
SEMA3B-203ENST00000419007 CCDC40Q4G0X9 1142 aa16.8■□□□□ 0.28
SEMA3B-203ENST00000419007 GJA10Q969M2 543 aa16.8■□□□□ 0.28
SEMA3B-203ENST00000419007 MTMR8Q96EF0 704 aa16.8■□□□□ 0.28
SEMA3B-203ENST00000419007 CDCA7Q9BWT1 371 aaPredicted RBP16.8■□□□□ 0.28
SEMA3B-203ENST00000419007 BLOC1S4Q9NUP1 217 aa16.8■□□□□ 0.28
SEMA3B-203ENST00000419007 DLEC1Q9Y238 1755 aa16.79■□□□□ 0.28
SEMA3B-203ENST00000419007 EIF6P56537 245 aaKnown RBP16.79■□□□□ 0.28
SEMA3B-203ENST00000419007 CORO7P57737 925 aa16.79■□□□□ 0.28
SEMA3B-203ENST00000419007 TMEM266Q2M3C6 531 aa16.79■□□□□ 0.28
SEMA3B-203ENST00000419007 TSEN2Q8NCE0 465 aaKnown RBP16.79■□□□□ 0.28
SEMA3B-203ENST00000419007 ANKS1AQ92625 1134 aa16.79■□□□□ 0.28
SEMA3B-203ENST00000419007 NOX5Q96PH1 765 aa16.79■□□□□ 0.28
SEMA3B-203ENST00000419007 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.79■□□□□ 0.28
SEMA3B-203ENST00000419007 TRAF5O00463 557 aa16.79■□□□□ 0.28
SEMA3B-203ENST00000419007 HSF2BPO75031 334 aa16.79■□□□□ 0.28
SEMA3B-203ENST00000419007 FGFR1OPO95684 399 aaKnown RBP16.79■□□□□ 0.28
SEMA3B-203ENST00000419007 TNNI2P48788 182 aa16.79■□□□□ 0.28
SEMA3B-203ENST00000419007 UNC13DQ70J99 1090 aa16.79■□□□□ 0.28
SEMA3B-203ENST00000419007 MICALL1Q8N3F8 863 aa16.79■□□□□ 0.28
SEMA3B-203ENST00000419007 NUDT12Q9BQG2 462 aa16.79■□□□□ 0.28
SEMA3B-203ENST00000419007 LZTS2Q9BRK4 669 aa16.79■□□□□ 0.28
SEMA3B-203ENST00000419007 SLC37A4O43826 429 aa16.78■□□□□ 0.28
SEMA3B-203ENST00000419007 CDK8P49336 464 aa16.78■□□□□ 0.28
SEMA3B-203ENST00000419007 PPARDQ03181 441 aa16.78■□□□□ 0.28
SEMA3B-203ENST00000419007 SEMA3FQ13275 785 aa16.78■□□□□ 0.28
SEMA3B-203ENST00000419007 PACS2Q86VP3 889 aa16.78■□□□□ 0.28
SEMA3B-203ENST00000419007 DDX12PQ92771 950 aa16.78■□□□□ 0.28
SEMA3B-203ENST00000419007 TSG101Q99816 390 aa16.78■□□□□ 0.28
SEMA3B-203ENST00000419007 COL22A1Q8NFW1 1626 aaPredicted RBP16.78■□□□□ 0.28
SEMA3B-203ENST00000419007 USP17L5A8MUK1 530 aa16.78■□□□□ 0.28
SEMA3B-203ENST00000419007 FTCDO95954 541 aa16.78■□□□□ 0.28
SEMA3B-203ENST00000419007 ATP1A2P50993 1020 aa16.78■□□□□ 0.28
SEMA3B-203ENST00000419007 APBA1Q02410 837 aa16.78■□□□□ 0.28
SEMA3B-203ENST00000419007 HAUS3Q68CZ6 603 aa16.78■□□□□ 0.28
SEMA3B-203ENST00000419007 ARL8AQ96BM9 186 aa16.78■□□□□ 0.28
SEMA3B-203ENST00000419007 CEP95Q96GE4 821 aa16.78■□□□□ 0.28
SEMA3B-203ENST00000419007 CASZ1Q86V15 1759 aa16.78■□□□□ 0.28
SEMA3B-203ENST00000419007 ZSCAN5CA6NGD5 496 aaPredicted RBP16.78■□□□□ 0.28
SEMA3B-203ENST00000419007 EBAG9O00559 213 aa16.78■□□□□ 0.28
SEMA3B-203ENST00000419007 OPA1O60313 960 aa16.78■□□□□ 0.28
SEMA3B-203ENST00000419007 EPHB4P54760 987 aa16.78■□□□□ 0.28
SEMA3B-203ENST00000419007 KRT79Q5XKE5 535 aa16.78■□□□□ 0.28
SEMA3B-203ENST00000419007 NELFCDQ8IXH7 590 aa16.78■□□□□ 0.28
SEMA3B-203ENST00000419007 WDR66Q8TBY9 1149 aa16.78■□□□□ 0.28
SEMA3B-203ENST00000419007 PPM1EQ8WY54 764 aa16.78■□□□□ 0.28
SEMA3B-203ENST00000419007 PNMA5Q96PV4 448 aa16.78■□□□□ 0.28
SEMA3B-203ENST00000419007 SPZ1Q9BXG8 430 aa16.78■□□□□ 0.28
SEMA3B-203ENST00000419007 PACSIN2Q9UNF0 486 aaPredicted RBP16.78■□□□□ 0.28
SEMA3B-203ENST00000419007 SAMM50Q9Y512 469 aa16.78■□□□□ 0.28
SEMA3B-203ENST00000419007 GUCY2FP51841 1108 aa16.77■□□□□ 0.28
SEMA3B-203ENST00000419007 PPFIA1Q13136 1202 aa16.77■□□□□ 0.28
SEMA3B-203ENST00000419007 KCNK18Q7Z418 384 aa16.77■□□□□ 0.28
SEMA3B-203ENST00000419007 SH2D3CQ8N5H7 860 aa16.77■□□□□ 0.28
SEMA3B-203ENST00000419007 TLR10Q9BXR5 811 aa16.77■□□□□ 0.28
SEMA3B-203ENST00000419007 ZHX3Q9H4I2 956 aa16.77■□□□□ 0.28
SEMA3B-203ENST00000419007 ZNF287Q9HBT7 754 aa16.77■□□□□ 0.28
SEMA3B-203ENST00000419007 ZEB2O60315 1214 aa16.77■□□□□ 0.27
SEMA3B-203ENST00000419007 KRT14P02533 472 aa16.77■□□□□ 0.27
SEMA3B-203ENST00000419007 HNRNPH3P31942 346 aaKnown RBP16.77■□□□□ 0.27
SEMA3B-203ENST00000419007 POLR2FP61218 127 aaKnown RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms