RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 RPTORQ8N122 1335 aa10.14□□□□□ -0.79
LINCMD1-201ENST00000418518 KIAA1217Q5T5P2 1943 aa10.14□□□□□ -0.79
LINCMD1-201ENST00000418518 IGLV3-22A0A075B6J6 115 aa10.14□□□□□ -0.79
LINCMD1-201ENST00000418518 PSMA7O14818 248 aa10.14□□□□□ -0.79
LINCMD1-201ENST00000418518 NRDCO43847 1150 aa10.14□□□□□ -0.79
LINCMD1-201ENST00000418518 ICAM1P05362 532 aa10.14□□□□□ -0.79
LINCMD1-201ENST00000418518 FECHP22830 423 aa10.14□□□□□ -0.79
LINCMD1-201ENST00000418518 HSD17B4P51659 736 aa10.14□□□□□ -0.79
LINCMD1-201ENST00000418518 STX17P56962 302 aa10.14□□□□□ -0.79
LINCMD1-201ENST00000418518 SNAP25P60880 206 aa10.14□□□□□ -0.79
LINCMD1-201ENST00000418518 ASIC1P78348 528 aa10.14□□□□□ -0.79
LINCMD1-201ENST00000418518 MCM6Q14566 821 aa10.14□□□□□ -0.79
LINCMD1-201ENST00000418518 KRT31Q15323 416 aa10.14□□□□□ -0.79
LINCMD1-201ENST00000418518 ECM1Q16610 540 aa10.14□□□□□ -0.79
LINCMD1-201ENST00000418518 USH1GQ495M9 461 aa10.14□□□□□ -0.79
LINCMD1-201ENST00000418518 DCAF15Q66K64 600 aa10.14□□□□□ -0.79
LINCMD1-201ENST00000418518 KCNK18Q7Z418 384 aa10.14□□□□□ -0.79
LINCMD1-201ENST00000418518 IRF2BP1Q8IU81 584 aa10.14□□□□□ -0.79
LINCMD1-201ENST00000418518 APOBEC3FQ8IUX4 373 aaKnown RBP10.14□□□□□ -0.79
LINCMD1-201ENST00000418518 TMEM139Q8IV31 216 aa10.14□□□□□ -0.79
LINCMD1-201ENST00000418518 UPF1Q92900 1129 aaKnown RBP eCLIP10.14□□□□□ -0.79
LINCMD1-201ENST00000418518 DNAJC19Q96DA6 116 aa10.14□□□□□ -0.79
LINCMD1-201ENST00000418518 PRIMPOLQ96LW4 560 aa10.14□□□□□ -0.79
LINCMD1-201ENST00000418518 PLIN2Q99541 437 aa10.14□□□□□ -0.79
LINCMD1-201ENST00000418518 NUDT12Q9BQG2 462 aa10.14□□□□□ -0.79
LINCMD1-201ENST00000418518 WDR18Q9BV38 432 aa10.14□□□□□ -0.79
LINCMD1-201ENST00000418518 ZNF341Q9BYN7 854 aa10.14□□□□□ -0.79
LINCMD1-201ENST00000418518 EHMT1Q9H9B1 1298 aa10.14□□□□□ -0.79
LINCMD1-201ENST00000418518 HACL1Q9UJ83 578 aa10.14□□□□□ -0.79
LINCMD1-201ENST00000418518 PNMA2Q9UL42 364 aa10.14□□□□□ -0.79
LINCMD1-201ENST00000418518 PPP2R3BQ9Y5P8 575 aa10.14□□□□□ -0.79
LINCMD1-201ENST00000418518 SSC5DA1L4H1 1573 aa10.14□□□□□ -0.79
LINCMD1-201ENST00000418518 ZNF536O15090 1300 aa10.13□□□□□ -0.79
LINCMD1-201ENST00000418518 PITPNM2Q9BZ72 1349 aa10.13□□□□□ -0.79
LINCMD1-201ENST00000418518 BICDL2A1A5D9 508 aa10.13□□□□□ -0.79
LINCMD1-201ENST00000418518 FRMD3A2A2Y4 597 aa10.13□□□□□ -0.79
LINCMD1-201ENST00000418518 FAM86B1E9PN63 330 aa10.13□□□□□ -0.79
LINCMD1-201ENST00000418518 GCOM1H8Y6P7 765 aaPredicted RBP10.13□□□□□ -0.79
LINCMD1-201ENST00000418518 TPM2P07951 284 aa10.13□□□□□ -0.79
LINCMD1-201ENST00000418518 FAM86B2P0C5J1 330 aa10.13□□□□□ -0.79
LINCMD1-201ENST00000418518 POLR2MP0CAP2 368 aa10.13□□□□□ -0.79
LINCMD1-201ENST00000418518 FDX1P10109 184 aa10.13□□□□□ -0.79
LINCMD1-201ENST00000418518 TAL1P17542 331 aaPredicted RBP10.13□□□□□ -0.79
LINCMD1-201ENST00000418518 EEF1GP26641 437 aaKnown RBP10.13□□□□□ -0.79
LINCMD1-201ENST00000418518 COPB1P53618 953 aaKnown RBP10.13□□□□□ -0.79
LINCMD1-201ENST00000418518 PDE4DQ08499 809 aa10.13□□□□□ -0.79
LINCMD1-201ENST00000418518 PSMD2Q13200 908 aa10.13□□□□□ -0.79
LINCMD1-201ENST00000418518 FILIP1LQ4L180 1135 aa10.13□□□□□ -0.79
LINCMD1-201ENST00000418518 TCP11X2Q5H9J9 407 aa10.13□□□□□ -0.79
LINCMD1-201ENST00000418518 HAUS3Q68CZ6 603 aa10.13□□□□□ -0.79
LINCMD1-201ENST00000418518 CENPPQ6IPU0 288 aa10.13□□□□□ -0.79
LINCMD1-201ENST00000418518 NYAP1Q6ZVC0 841 aa10.13□□□□□ -0.79
LINCMD1-201ENST00000418518 LDHDQ86WU2 507 aa10.13□□□□□ -0.79
LINCMD1-201ENST00000418518 CCAR2Q8N163 923 aaKnown RBP10.13□□□□□ -0.79
LINCMD1-201ENST00000418518 GUF1Q8N442 669 aaKnown RBP10.13□□□□□ -0.79
LINCMD1-201ENST00000418518 TC2NQ8N9U0 490 aa10.13□□□□□ -0.79
LINCMD1-201ENST00000418518 KIAA0895Q8NCT3 520 aa10.13□□□□□ -0.79
LINCMD1-201ENST00000418518 NLGN2Q8NFZ4 835 aa10.13□□□□□ -0.79
LINCMD1-201ENST00000418518 P2RX5Q93086 422 aa10.13□□□□□ -0.79
LINCMD1-201ENST00000418518 DUSP9Q99956 384 aaKnown RBP10.13□□□□□ -0.79
LINCMD1-201ENST00000418518 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.13□□□□□ -0.79
LINCMD1-201ENST00000418518 VAV3Q9UKW4 847 aa10.13□□□□□ -0.79
LINCMD1-201ENST00000418518 RABGAP1Q9Y3P9 1069 aa10.13□□□□□ -0.79
LINCMD1-201ENST00000418518 ASTN2O75129 1339 aaPredicted RBP10.12□□□□□ -0.79
LINCMD1-201ENST00000418518 KCNJ18B7U540 433 aa10.12□□□□□ -0.79
LINCMD1-201ENST00000418518 MSH4O15457 936 aa10.12□□□□□ -0.79
LINCMD1-201ENST00000418518 TEX33O43247 280 aa10.12□□□□□ -0.79
LINCMD1-201ENST00000418518 MUTP22033 750 aa10.12□□□□□ -0.79
LINCMD1-201ENST00000418518 RPA1P27694 616 aa10.12□□□□□ -0.79
LINCMD1-201ENST00000418518 INPP5BP32019 993 aa10.12□□□□□ -0.79
LINCMD1-201ENST00000418518 CCT6AP40227 531 aaKnown RBP10.12□□□□□ -0.79
LINCMD1-201ENST00000418518 PMS1P54277 932 aaKnown RBP10.12□□□□□ -0.79
LINCMD1-201ENST00000418518 USP14P54578 494 aa10.12□□□□□ -0.79
LINCMD1-201ENST00000418518 STK4Q13043 487 aa10.12□□□□□ -0.79
LINCMD1-201ENST00000418518 KCNJ12Q14500 433 aa10.12□□□□□ -0.79
LINCMD1-201ENST00000418518 TPD52L1Q16890 204 aaPredicted RBP10.12□□□□□ -0.79
LINCMD1-201ENST00000418518 TBC1D10BQ4KMP7 808 aaPredicted RBP10.12□□□□□ -0.79
LINCMD1-201ENST00000418518 PRR16Q569H4 304 aa10.12□□□□□ -0.79
LINCMD1-201ENST00000418518 NOL9Q5SY16 702 aaKnown RBP10.12□□□□□ -0.79
LINCMD1-201ENST00000418518 E4F1Q66K89 784 aaPredicted RBP10.12□□□□□ -0.79
LINCMD1-201ENST00000418518 NIPA1Q7RTP0 329 aa10.12□□□□□ -0.79
LINCMD1-201ENST00000418518 SAMD7Q7Z3H4 446 aa10.12□□□□□ -0.79
LINCMD1-201ENST00000418518 PRPF38AQ8NAV1 312 aaKnown RBP10.12□□□□□ -0.79
LINCMD1-201ENST00000418518 ANKRD20A12PQ8NF67 263 aa10.12□□□□□ -0.79
LINCMD1-201ENST00000418518 ERMNQ8TAM6 284 aa10.12□□□□□ -0.79
LINCMD1-201ENST00000418518 SLC5A5Q92911 643 aa10.12□□□□□ -0.79
LINCMD1-201ENST00000418518 KIFC2Q96AC6 838 aa10.12□□□□□ -0.79
LINCMD1-201ENST00000418518 C12orf42Q96LP6 360 aa10.12□□□□□ -0.79
LINCMD1-201ENST00000418518 PANX2Q96RD6 677 aa10.12□□□□□ -0.79
LINCMD1-201ENST00000418518 FEZ1Q99689 392 aa10.12□□□□□ -0.79
LINCMD1-201ENST00000418518 SLF1Q9BQI6 1058 aa10.12□□□□□ -0.79
LINCMD1-201ENST00000418518 POLR3CQ9BUI4 534 aaPredicted RBP10.12□□□□□ -0.79
LINCMD1-201ENST00000418518 FBXO28Q9NVF7 368 aa10.12□□□□□ -0.79
LINCMD1-201ENST00000418518 MAP3K20Q9NYL2 800 aaKnown RBP10.12□□□□□ -0.79
LINCMD1-201ENST00000418518 GPRC5DQ9NZD1 345 aa10.12□□□□□ -0.79
LINCMD1-201ENST00000418518 A0A1W2PQC6 194 aa10.11□□□□□ -0.79
LINCMD1-201ENST00000418518 POTEB3A0JP26 581 aa10.11□□□□□ -0.79
LINCMD1-201ENST00000418518 TRIM49BA6NDI0 452 aa10.11□□□□□ -0.79
LINCMD1-201ENST00000418518 LGALS16A8MUM7 142 aa10.11□□□□□ -0.79
LINCMD1-201ENST00000418518 POTECB2RU33 542 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms