RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 ZFYVE16Q7Z3T8 1539 aa6.66□□□□□ -1.34
PTPRK-209ENST00000415046 KDM5CP41229 1560 aa6.66□□□□□ -1.34
PTPRK-209ENST00000415046 F8W031 263 aaPredicted RBP6.66□□□□□ -1.34
PTPRK-209ENST00000415046 VAMP4O75379 141 aa6.66□□□□□ -1.34
PTPRK-209ENST00000415046 RAPGEF3O95398 923 aa6.66□□□□□ -1.34
PTPRK-209ENST00000415046 LIMS1P48059 325 aa6.66□□□□□ -1.34
PTPRK-209ENST00000415046 PRR5P85299 388 aa6.66□□□□□ -1.34
PTPRK-209ENST00000415046 AMPD2Q01433 879 aa6.66□□□□□ -1.34
PTPRK-209ENST00000415046 ADAT2Q7Z6V5 191 aaKnown RBP6.66□□□□□ -1.34
PTPRK-209ENST00000415046 NLGN1Q8N2Q7 840 aa6.66□□□□□ -1.34
PTPRK-209ENST00000415046 ZNF513Q8N8E2 541 aaPredicted RBP6.66□□□□□ -1.34
PTPRK-209ENST00000415046 FEZF2Q8TBJ5 459 aa6.66□□□□□ -1.34
PTPRK-209ENST00000415046 KIAA1522Q9P206 1035 aaPredicted RBP6.66□□□□□ -1.34
PTPRK-209ENST00000415046 PHLDB1Q86UU1 1377 aa6.66□□□□□ -1.34
PTPRK-209ENST00000415046 ARHGEF12Q9NZN5 1544 aa6.66□□□□□ -1.34
PTPRK-209ENST00000415046 INO80Q9ULG1 1556 aaPredicted RBP6.65□□□□□ -1.34
PTPRK-209ENST00000415046 DIP2CQ9Y2E4 1556 aa6.65□□□□□ -1.34
PTPRK-209ENST00000415046 FER1L4A9Z1Z3 1794 aa6.65□□□□□ -1.34
PTPRK-209ENST00000415046 ZC3H12DA2A288 527 aaKnown RBP6.65□□□□□ -1.34
PTPRK-209ENST00000415046 C2orf71A6NGG8 1288 aa6.65□□□□□ -1.34
PTPRK-209ENST00000415046 FFAR3O14843 346 aa6.65□□□□□ -1.34
PTPRK-209ENST00000415046 FOXD2O60548 495 aaPredicted RBP6.65□□□□□ -1.34
PTPRK-209ENST00000415046 SEPHS1P49903 392 aa6.65□□□□□ -1.34
PTPRK-209ENST00000415046 PPP2R5EQ16537 467 aa6.65□□□□□ -1.34
PTPRK-209ENST00000415046 DPY19L1Q2PZI1 675 aa6.65□□□□□ -1.34
PTPRK-209ENST00000415046 C9orf131Q5VYM1 1079 aa6.65□□□□□ -1.34
PTPRK-209ENST00000415046 CXorf38Q8TB03 319 aa6.65□□□□□ -1.34
PTPRK-209ENST00000415046 TSPAN17Q96FV3 270 aa6.65□□□□□ -1.34
PTPRK-209ENST00000415046 KRTAP9-3Q9BYQ3 159 aa6.65□□□□□ -1.34
PTPRK-209ENST00000415046 TGIF2Q9GZN2 237 aa6.65□□□□□ -1.34
PTPRK-209ENST00000415046 FBLN5Q9UBX5 448 aa6.65□□□□□ -1.34
PTPRK-209ENST00000415046 CFDP1Q9UEE9 299 aaPredicted RBP6.65□□□□□ -1.34
PTPRK-209ENST00000415046 STRIP2Q9ULQ0 834 aa6.65□□□□□ -1.34
PTPRK-209ENST00000415046 CFAP65Q6ZU64 1925 aaKnown RBP6.65□□□□□ -1.34
PTPRK-209ENST00000415046 MYOM3Q5VTT5 1437 aa6.65□□□□□ -1.35
PTPRK-209ENST00000415046 ZNF518AQ6AHZ1 1483 aa6.65□□□□□ -1.35
PTPRK-209ENST00000415046 RIMS1Q86UR5 1692 aaKnown RBP6.65□□□□□ -1.35
PTPRK-209ENST00000415046 ANKRD34BA5PLL1 514 aa6.64□□□□□ -1.35
PTPRK-209ENST00000415046 VWA3BQ502W6 1294 aa6.64□□□□□ -1.35
PTPRK-209ENST00000415046 LCE5AQ5TCM9 118 aa6.64□□□□□ -1.35
PTPRK-209ENST00000415046 VHLLQ6RSH7 139 aa6.64□□□□□ -1.35
PTPRK-209ENST00000415046 CABP7Q86V35 215 aa6.64□□□□□ -1.35
PTPRK-209ENST00000415046 LZTR1Q8N653 840 aa6.64□□□□□ -1.35
PTPRK-209ENST00000415046 FAM169BQ8N8A8 192 aa6.64□□□□□ -1.35
PTPRK-209ENST00000415046 SYT8Q8NBV8 401 aa6.64□□□□□ -1.35
PTPRK-209ENST00000415046 NETO2Q8NC67 525 aa6.64□□□□□ -1.35
PTPRK-209ENST00000415046 CPLX3Q8WVH0 158 aa6.64□□□□□ -1.35
PTPRK-209ENST00000415046 MTA3Q9BTC8 594 aa6.64□□□□□ -1.35
PTPRK-209ENST00000415046 KRTAP4-5Q9BYR2 181 aa6.64□□□□□ -1.35
PTPRK-209ENST00000415046 PODXL2Q9NZ53 605 aa6.64□□□□□ -1.35
PTPRK-209ENST00000415046 DBR1Q9UK59 544 aaKnown RBP6.64□□□□□ -1.35
PTPRK-209ENST00000415046 ZNF644Q9H582 1327 aaPredicted RBP6.64□□□□□ -1.35
PTPRK-209ENST00000415046 TRAPPC8Q9Y2L5 1435 aa6.64□□□□□ -1.35
PTPRK-209ENST00000415046 PLEKHH2Q8IVE3 1493 aa6.64□□□□□ -1.35
PTPRK-209ENST00000415046 ATP7AQ04656 1500 aa6.64□□□□□ -1.35
PTPRK-209ENST00000415046 ARHGEF5Q12774 1597 aa6.64□□□□□ -1.35
PTPRK-209ENST00000415046 BCORL1Q5H9F3 1711 aa6.64□□□□□ -1.35
PTPRK-209ENST00000415046 TRBV23OR9-2A0A075B6M9 112 aa6.63□□□□□ -1.35
PTPRK-209ENST00000415046 PLA2G1BP04054 148 aaKnown RBP6.63□□□□□ -1.35
PTPRK-209ENST00000415046 NCAM1P13591 858 aa6.63□□□□□ -1.35
PTPRK-209ENST00000415046 ATF2P15336 505 aa6.63□□□□□ -1.35
PTPRK-209ENST00000415046 SYN1P17600 705 aa6.63□□□□□ -1.35
PTPRK-209ENST00000415046 DNMT1P26358 1616 aaKnown RBP6.63□□□□□ -1.35
PTPRK-209ENST00000415046 HTRA3P83110 453 aa6.63□□□□□ -1.35
PTPRK-209ENST00000415046 RBM10P98175 930 aaKnown RBP6.63□□□□□ -1.35
PTPRK-209ENST00000415046 TRIM26Q12899 539 aaPredicted RBP6.63□□□□□ -1.35
PTPRK-209ENST00000415046 KIAA1211LQ6NV74 962 aa6.63□□□□□ -1.35
PTPRK-209ENST00000415046 FNIP1Q8TF40 1166 aa6.63□□□□□ -1.35
PTPRK-209ENST00000415046 APEX2Q9UBZ4 518 aa6.63□□□□□ -1.35
PTPRK-209ENST00000415046 YEATS2Q9ULM3 1422 aa6.63□□□□□ -1.35
PTPRK-209ENST00000415046 SUGT1Q9Y2Z0 365 aa6.63□□□□□ -1.35
PTPRK-209ENST00000415046 RWDD3Q9Y3V2 267 aa6.63□□□□□ -1.35
PTPRK-209ENST00000415046 MADDQ8WXG6 1647 aa6.62□□□□□ -1.35
PTPRK-209ENST00000415046 FGD6Q6ZV73 1430 aa6.62□□□□□ -1.35
PTPRK-209ENST00000415046 ASGR2P07307 311 aa6.62□□□□□ -1.35
PTPRK-209ENST00000415046 PAMP19021 973 aa6.62□□□□□ -1.35
PTPRK-209ENST00000415046 HNRNPMP52272 730 aaKnown RBP eCLIP6.62□□□□□ -1.35
PTPRK-209ENST00000415046 ZNF143P52747 638 aaPredicted RBP6.62□□□□□ -1.35
PTPRK-209ENST00000415046 FOXO4P98177 505 aa6.62□□□□□ -1.35
PTPRK-209ENST00000415046 CPNE8Q86YQ8 564 aa6.62□□□□□ -1.35
PTPRK-209ENST00000415046 ALG3Q92685 438 aa6.62□□□□□ -1.35
PTPRK-209ENST00000415046 ACBD3Q9H3P7 528 aa6.62□□□□□ -1.35
PTPRK-209ENST00000415046 FAN1Q9Y2M0 1017 aa6.62□□□□□ -1.35
PTPRK-209ENST00000415046 EMC9Q9Y3B6 208 aa6.62□□□□□ -1.35
PTPRK-209ENST00000415046 CCDC141Q6ZP82 1450 aa6.61□□□□□ -1.35
PTPRK-209ENST00000415046 NPHP3-ACAD11A0A0J9YXS1 232 aa6.61□□□□□ -1.35
PTPRK-209ENST00000415046 UNCXA6NJT0 531 aa6.61□□□□□ -1.35
PTPRK-209ENST00000415046 PPP1R11O60927 126 aaPredicted RBP6.61□□□□□ -1.35
PTPRK-209ENST00000415046 PMLP29590 882 aa6.61□□□□□ -1.35
PTPRK-209ENST00000415046 MC3RP41968 323 aa6.61□□□□□ -1.35
PTPRK-209ENST00000415046 FRMD5Q7Z6J6 570 aa6.61□□□□□ -1.35
PTPRK-209ENST00000415046 B3GNT8Q7Z7M8 397 aa6.61□□□□□ -1.35
PTPRK-209ENST00000415046 SAPCD2Q86UD0 394 aa6.61□□□□□ -1.35
PTPRK-209ENST00000415046 CRACR2BQ8N4Y2 399 aaPredicted RBP6.61□□□□□ -1.35
PTPRK-209ENST00000415046 AFAP1Q8N556 730 aa6.61□□□□□ -1.35
PTPRK-209ENST00000415046 COPS5Q92905 334 aa6.61□□□□□ -1.35
PTPRK-209ENST00000415046 PEX11GQ96HA9 241 aa6.61□□□□□ -1.35
PTPRK-209ENST00000415046 TEPSINQ96N21 525 aa6.61□□□□□ -1.35
PTPRK-209ENST00000415046 RXFP1Q9HBX9 757 aa6.61□□□□□ -1.35
PTPRK-209ENST00000415046 GULP1Q9UBP9 304 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms