RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 MIGA2Q7L4E1 593 aa27.43■■□□□ 1.98
VRK2-202ENST00000412104 SLFN12Q8IYM2 578 aa27.43■■□□□ 1.98
VRK2-202ENST00000412104 NAA15Q9BXJ9 866 aaKnown RBP27.43■■□□□ 1.98
VRK2-202ENST00000412104 SLC39A2Q9NP94 309 aa27.43■■□□□ 1.98
VRK2-202ENST00000412104 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.43■■□□□ 1.98
VRK2-202ENST00000412104 MAGEC2Q9UBF1 373 aaPredicted RBP27.43■■□□□ 1.98
VRK2-202ENST00000412104 BRCA1P38398 1863 aaKnown RBP27.43■■□□□ 1.98
VRK2-202ENST00000412104 TPM1P09493 284 aa27.43■■□□□ 1.98
VRK2-202ENST00000412104 SREBF1P36956 1147 aa27.43■■□□□ 1.98
VRK2-202ENST00000412104 FXR1P51114 621 aaKnown RBP eCLIP27.43■■□□□ 1.98
VRK2-202ENST00000412104 UBXN1Q04323 297 aa27.43■■□□□ 1.98
VRK2-202ENST00000412104 DDX12PQ92771 950 aa27.43■■□□□ 1.98
VRK2-202ENST00000412104 NT5C3AQ9H0P0 336 aa27.43■■□□□ 1.98
VRK2-202ENST00000412104 LGALS16A8MUM7 142 aa27.42■■□□□ 1.98
VRK2-202ENST00000412104 ZBTB7AO95365 584 aa27.42■■□□□ 1.98
VRK2-202ENST00000412104 ETNPPLQ8TBG4 499 aa27.42■■□□□ 1.98
VRK2-202ENST00000412104 CCDC51Q96ER9 411 aa27.42■■□□□ 1.98
VRK2-202ENST00000412104 PGAP2Q9UHJ9 254 aa27.42■■□□□ 1.98
VRK2-202ENST00000412104 WNT10BO00744 389 aa27.41■■□□□ 1.98
VRK2-202ENST00000412104 TRIM14Q14142 442 aa27.41■■□□□ 1.98
VRK2-202ENST00000412104 NBPF9Q3BBW0 867 aa27.41■■□□□ 1.98
VRK2-202ENST00000412104 Q4G0T1 1027 aa27.41■■□□□ 1.98
VRK2-202ENST00000412104 PRR16Q569H4 304 aa27.41■■□□□ 1.98
VRK2-202ENST00000412104 CIAPIN1Q6FI81 312 aa27.41■■□□□ 1.98
VRK2-202ENST00000412104 TAOK3Q9H2K8 898 aa27.41■■□□□ 1.98
VRK2-202ENST00000412104 SMCHD1A6NHR9 2005 aa27.41■■□□□ 1.98
VRK2-202ENST00000412104 SOWAHDA6NJG2 315 aa27.41■■□□□ 1.98
VRK2-202ENST00000412104 HOXA13P31271 388 aaPredicted RBP27.41■■□□□ 1.98
VRK2-202ENST00000412104 ETF1P62495 437 aaKnown RBP27.41■■□□□ 1.98
VRK2-202ENST00000412104 DALRD3Q5D0E6 543 aaKnown RBP27.41■■□□□ 1.98
VRK2-202ENST00000412104 VCPKMTQ9H867 229 aa27.41■■□□□ 1.98
VRK2-202ENST00000412104 PIK3CDO00329 1044 aa27.4■■□□□ 1.98
VRK2-202ENST00000412104 SLC26A4O43511 780 aa27.4■■□□□ 1.98
VRK2-202ENST00000412104 IDEP14735 1019 aa27.4■■□□□ 1.98
VRK2-202ENST00000412104 CAP2P40123 477 aa27.4■■□□□ 1.98
VRK2-202ENST00000412104 EHHADHQ08426 723 aa27.4■■□□□ 1.98
VRK2-202ENST00000412104 TRIM65Q6PJ69 517 aa27.4■■□□□ 1.98
VRK2-202ENST00000412104 ZNF710Q8N1W2 664 aa27.4■■□□□ 1.98
VRK2-202ENST00000412104 LENG9Q96B70 501 aa27.4■■□□□ 1.98
VRK2-202ENST00000412104 MYOZ2Q9NPC6 264 aa27.4■■□□□ 1.98
VRK2-202ENST00000412104 SHTN1A0MZ66 631 aa27.39■■□□□ 1.98
VRK2-202ENST00000412104 TBX3O15119 743 aa27.39■■□□□ 1.98
VRK2-202ENST00000412104 MTF1Q14872 753 aa27.39■■□□□ 1.98
VRK2-202ENST00000412104 MB21D1Q8N884 522 aa27.39■■□□□ 1.98
VRK2-202ENST00000412104 ZNF507Q8TCN5 953 aa27.39■■□□□ 1.98
VRK2-202ENST00000412104 SEMA6BQ9H3T3 888 aa27.39■■□□□ 1.98
VRK2-202ENST00000412104 GOLGA6L9A6NEM1 432 aa27.39■■□□□ 1.97
VRK2-202ENST00000412104 FAM86B1E9PN63 330 aa27.39■■□□□ 1.97
VRK2-202ENST00000412104 FAM86B2P0C5J1 330 aa27.39■■□□□ 1.97
VRK2-202ENST00000412104 FECHP22830 423 aa27.39■■□□□ 1.97
VRK2-202ENST00000412104 STAT3P40763 770 aa27.39■■□□□ 1.97
VRK2-202ENST00000412104 CENPPQ6IPU0 288 aa27.39■■□□□ 1.97
VRK2-202ENST00000412104 FAM114A1Q8IWE2 563 aa27.39■■□□□ 1.97
VRK2-202ENST00000412104 DESI2Q9BSY9 194 aa27.39■■□□□ 1.97
VRK2-202ENST00000412104 KIAA1024Q9UPX6 916 aa27.39■■□□□ 1.97
VRK2-202ENST00000412104 ATAD5Q96QE3 1844 aa27.38■■□□□ 1.97
VRK2-202ENST00000412104 POTEB3A0JP26 581 aa27.38■■□□□ 1.97
VRK2-202ENST00000412104 POTECB2RU33 542 aa27.38■■□□□ 1.97
VRK2-202ENST00000412104 CIITAP33076 1130 aa27.38■■□□□ 1.97
VRK2-202ENST00000412104 SPIRE1Q08AE8 756 aa27.38■■□□□ 1.97
VRK2-202ENST00000412104 TRAF1Q13077 416 aa27.38■■□□□ 1.97
VRK2-202ENST00000412104 ZYXQ15942 572 aaKnown RBP27.38■■□□□ 1.97
VRK2-202ENST00000412104 POTEBQ6S5H4 581 aa27.38■■□□□ 1.97
VRK2-202ENST00000412104 JDP2Q8WYK2 163 aa27.38■■□□□ 1.97
VRK2-202ENST00000412104 DNAJC19Q96DA6 116 aa27.38■■□□□ 1.97
VRK2-202ENST00000412104 CNOT6LQ96LI5 555 aaKnown RBP27.38■■□□□ 1.97
VRK2-202ENST00000412104 RANBP17Q9H2T7 1088 aaKnown RBP27.38■■□□□ 1.97
VRK2-202ENST00000412104 SH2D4AQ9H788 454 aa27.38■■□□□ 1.97
VRK2-202ENST00000412104 PHLPP2Q6ZVD8 1323 aa27.38■■□□□ 1.97
VRK2-202ENST00000412104 A0A1W2PQC6 194 aa27.37■■□□□ 1.97
VRK2-202ENST00000412104 E9PMD0 336 aa27.37■■□□□ 1.97
VRK2-202ENST00000412104 HOXA7P31268 230 aaPredicted RBP27.37■■□□□ 1.97
VRK2-202ENST00000412104 RAD9BQ6WBX8 426 aa27.37■■□□□ 1.97
VRK2-202ENST00000412104 GUF1Q8N442 669 aaKnown RBP27.37■■□□□ 1.97
VRK2-202ENST00000412104 CHURC1Q8WUH1 139 aa27.37■■□□□ 1.97
VRK2-202ENST00000412104 EEF2KMTQ96G04 330 aa27.37■■□□□ 1.97
VRK2-202ENST00000412104 TUBGCP2Q9BSJ2 902 aa27.37■■□□□ 1.97
VRK2-202ENST00000412104 ABHD10Q9NUJ1 306 aa27.37■■□□□ 1.97
VRK2-202ENST00000412104 RNF225M0QZC1 329 aaPredicted RBP27.37■■□□□ 1.97
VRK2-202ENST00000412104 PES1O00541 588 aaKnown RBP27.37■■□□□ 1.97
VRK2-202ENST00000412104 PRKCSHP14314 528 aaPredicted RBP27.37■■□□□ 1.97
VRK2-202ENST00000412104 MAP3K10Q02779 954 aa27.37■■□□□ 1.97
VRK2-202ENST00000412104 PSMD2Q13200 908 aa27.37■■□□□ 1.97
VRK2-202ENST00000412104 CCDC174Q6PII3 467 aa27.37■■□□□ 1.97
VRK2-202ENST00000412104 KIFC2Q96AC6 838 aa27.37■■□□□ 1.97
VRK2-202ENST00000412104 MED24O75448 989 aa27.36■■□□□ 1.97
VRK2-202ENST00000412104 HAUS3Q68CZ6 603 aa27.36■■□□□ 1.97
VRK2-202ENST00000412104 GLIS2Q9BZE0 524 aaPredicted RBP27.36■■□□□ 1.97
VRK2-202ENST00000412104 DNAI1Q9UI46 699 aa27.36■■□□□ 1.97
VRK2-202ENST00000412104 B4DLN1 442 aa27.35■■□□□ 1.97
VRK2-202ENST00000412104 SSBP05455 408 aaKnown RBP eCLIP27.35■■□□□ 1.97
VRK2-202ENST00000412104 CYP3A4P08684 503 aa27.35■■□□□ 1.97
VRK2-202ENST00000412104 COASYQ13057 564 aa27.35■■□□□ 1.97
VRK2-202ENST00000412104 TEX2Q8IWB9 1127 aa27.35■■□□□ 1.97
VRK2-202ENST00000412104 RRP9O43818 475 aaKnown RBP27.35■■□□□ 1.97
VRK2-202ENST00000412104 PLA2G6O60733 806 aa27.35■■□□□ 1.97
VRK2-202ENST00000412104 CCDC175P0C221 793 aa27.35■■□□□ 1.97
VRK2-202ENST00000412104 PLA2G4BP0C869 781 aa27.35■■□□□ 1.97
VRK2-202ENST00000412104 POLD1P28340 1107 aa27.35■■□□□ 1.97
VRK2-202ENST00000412104 DNM2P50570 870 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms