RNA–Protein interactions for RNA: ENST00000402845.7

CACNA1C-221, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-221ENST00000402845 TRIM58Q8NG06 486 aa12.01□□□□□ -0.49
CACNA1C-221ENST00000402845 CDC26Q8NHZ8 85 aa12.01□□□□□ -0.49
CACNA1C-221ENST00000402845 LMBRD1Q9NUN5 540 aa12.01□□□□□ -0.49
CACNA1C-221ENST00000402845 DDX25Q9UHL0 483 aaKnown RBP12.01□□□□□ -0.49
CACNA1C-221ENST00000402845 NFE2L3Q9Y4A8 694 aa12.01□□□□□ -0.49
CACNA1C-221ENST00000402845 POLR1AO95602 1720 aaPredicted RBP12□□□□□ -0.49
CACNA1C-221ENST00000402845 OAS2P29728 719 aaKnown RBP12□□□□□ -0.49
CACNA1C-221ENST00000402845 GYG1P46976 350 aa12□□□□□ -0.49
CACNA1C-221ENST00000402845 BFSP1Q12934 665 aa12□□□□□ -0.49
CACNA1C-221ENST00000402845 SLC12A1Q13621 1099 aa12□□□□□ -0.49
CACNA1C-221ENST00000402845 PPP2R5EQ16537 467 aa12□□□□□ -0.49
CACNA1C-221ENST00000402845 TPCN1Q9ULQ1 816 aa12□□□□□ -0.49
CACNA1C-221ENST00000402845 ORC6Q9Y5N6 252 aa12□□□□□ -0.49
CACNA1C-221ENST00000402845 RNF8O76064 485 aa12□□□□□ -0.49
CACNA1C-221ENST00000402845 MMP10P09238 476 aa12□□□□□ -0.49
CACNA1C-221ENST00000402845 TECP42680 631 aa12□□□□□ -0.49
CACNA1C-221ENST00000402845 PHEXP78562 749 aa12□□□□□ -0.49
CACNA1C-221ENST00000402845 SZRD1Q7Z422 152 aa12□□□□□ -0.49
CACNA1C-221ENST00000402845 ATP6V1E2Q96A05 226 aa12□□□□□ -0.49
CACNA1C-221ENST00000402845 SERTAD1Q9UHV2 236 aa12□□□□□ -0.49
CACNA1C-221ENST00000402845 EIF3CLB5ME19 914 aaKnown RBP12□□□□□ -0.49
CACNA1C-221ENST00000402845 SLFN13Q68D06 897 aa12□□□□□ -0.49
CACNA1C-221ENST00000402845 RNF168Q8IYW5 571 aaPredicted RBP12□□□□□ -0.49
CACNA1C-221ENST00000402845 EIF3CQ99613 913 aaKnown RBP12□□□□□ -0.49
CACNA1C-221ENST00000402845 FARP1Q9Y4F1 1045 aaPredicted RBP12□□□□□ -0.49
CACNA1C-221ENST00000402845 H7C0C1 242 aa12□□□□□ -0.49
CACNA1C-221ENST00000402845 DIAPH2O60879 1101 aa12□□□□□ -0.49
CACNA1C-221ENST00000402845 ATP5OP48047 213 aa12□□□□□ -0.49
CACNA1C-221ENST00000402845 CAPN12Q6ZSI9 719 aa12□□□□□ -0.49
CACNA1C-221ENST00000402845 TBRG4Q969Z0 631 aaKnown RBP eCLIP12□□□□□ -0.49
CACNA1C-221ENST00000402845 RPGRIP1Q96KN7 1286 aa12□□□□□ -0.49
CACNA1C-221ENST00000402845 HYOU1Q9Y4L1 999 aa12□□□□□ -0.49
CACNA1C-221ENST00000402845 ARHGEF5Q12774 1597 aa12□□□□□ -0.49
CACNA1C-221ENST00000402845 SERPINB6P35237 376 aa12□□□□□ -0.49
CACNA1C-221ENST00000402845 PDCD2Q16342 344 aaPredicted RBP12□□□□□ -0.49
CACNA1C-221ENST00000402845 ANKRD20A4Q4UJ75 823 aa12□□□□□ -0.49
CACNA1C-221ENST00000402845 ANKRD20A8PQ5CZ79 823 aa12□□□□□ -0.49
CACNA1C-221ENST00000402845 ANKRD20A2Q5SQ80 823 aa12□□□□□ -0.49
CACNA1C-221ENST00000402845 ANKRD20A1Q5TYW2 823 aa12□□□□□ -0.49
CACNA1C-221ENST00000402845 TTBK2Q6IQ55 1244 aa12□□□□□ -0.49
CACNA1C-221ENST00000402845 UNC5CLQ8IV45 518 aa12□□□□□ -0.49
CACNA1C-221ENST00000402845 ZNF654Q8IZM8 581 aa12□□□□□ -0.49
CACNA1C-221ENST00000402845 FAM227BQ96M60 508 aa12□□□□□ -0.49
CACNA1C-221ENST00000402845 NR1H4Q96RI1 486 aaPredicted RBP12□□□□□ -0.49
CACNA1C-221ENST00000402845 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 GSTA4O15217 222 aa11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 RLBP1P12271 317 aa11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 OSTNP61366 133 aa11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 WHAMMP3Q1A5X7 153 aa11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 KRT24Q2M2I5 525 aa11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 TSC1Q92574 1164 aa11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 HOMER3Q9NSC5 361 aa11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 BABAM1Q9NWV8 329 aa11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 SAR1BQ9Y6B6 198 aa11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 MAD1L1Q9Y6D9 718 aa11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 SSH2Q76I76 1423 aa11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 ZAP70P43403 619 aa11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 CTSWP56202 376 aa11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 TRIM68Q6AZZ1 485 aa11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 PGBD1Q96JS3 809 aa11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 ZSCAN10Q96SZ4 725 aaPredicted RBP11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 BAIAP2L1Q9UHR4 511 aa11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 TRIM35Q9UPQ4 493 aa11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 SH3BGRP55822 239 aaPredicted RBP11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 NOP14P78316 857 aaKnown RBP11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 TRMT44Q8IYL2 757 aaKnown RBP11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 FAM149B1Q96BN6 582 aa11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 ADAMTS12P58397 1594 aa11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 F8W8V4 182 aa11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 CRKLP46109 303 aaKnown RBP11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 JPH2Q9BR39 696 aaPredicted RBP11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 SCHIP1Q9P0W5 487 aaPredicted RBP11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 hCG_1642624A0A1W2PR95 340 aa11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 STX1BP61266 288 aa11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 MFSD1Q9H3U5 465 aa11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 SLC38A10Q9HBR0 1119 aa11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 SMYD2Q9NRG4 433 aa11.99□□□□□ -0.49
CACNA1C-221ENST00000402845 LOC102724428A0A0B4J2F2 783 aa11.98□□□□□ -0.49
CACNA1C-221ENST00000402845 USP17L3A6NCW0 530 aa11.98□□□□□ -0.49
CACNA1C-221ENST00000402845 USP17L4A6NCW7 530 aa11.98□□□□□ -0.49
CACNA1C-221ENST00000402845 GNGT2O14610 69 aa11.98□□□□□ -0.49
CACNA1C-221ENST00000402845 BUB1O43683 1085 aa11.98□□□□□ -0.49
CACNA1C-221ENST00000402845 SIK1P57059 783 aa11.98□□□□□ -0.49
CACNA1C-221ENST00000402845 USP17L1Q7RTZ2 530 aa11.98□□□□□ -0.49
CACNA1C-221ENST00000402845 BLIDQ8IZY5 108 aa11.98□□□□□ -0.49
CACNA1C-221ENST00000402845 KBTBD3Q8NAB2 608 aa11.98□□□□□ -0.49
CACNA1C-221ENST00000402845 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.98□□□□□ -0.49
CACNA1C-221ENST00000402845 OTUD5Q96G74 571 aa11.98□□□□□ -0.49
CACNA1C-221ENST00000402845 NVLO15381 856 aaKnown RBP11.98□□□□□ -0.49
CACNA1C-221ENST00000402845 RBM6P78332 1123 aaKnown RBP11.98□□□□□ -0.49
CACNA1C-221ENST00000402845 MYL7Q01449 175 aa11.98□□□□□ -0.49
CACNA1C-221ENST00000402845 ASPHQ12797 758 aa11.98□□□□□ -0.49
CACNA1C-221ENST00000402845 FAM95CA0A1B0GW59 222 aa11.98□□□□□ -0.49
CACNA1C-221ENST00000402845 CLCA2Q9UQC9 943 aa11.98□□□□□ -0.49
CACNA1C-221ENST00000402845 TACO1Q9BSH4 297 aaKnown RBP11.98□□□□□ -0.49
CACNA1C-221ENST00000402845 TRAPPC8Q9Y2L5 1435 aa11.98□□□□□ -0.49
CACNA1C-221ENST00000402845 MAP7D3Q8IWC1 876 aa11.98□□□□□ -0.49
CACNA1C-221ENST00000402845 SCN4BQ8IWT1 228 aa11.98□□□□□ -0.49
CACNA1C-221ENST00000402845 AFG1LQ8WV93 481 aa11.98□□□□□ -0.49
CACNA1C-221ENST00000402845 SUCLG2Q96I99 432 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms