RNA–Protein interactions for RNA: ENST00000400566.5

SAMSN1-203, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMSN1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-203ENST00000400566 PRPF40AO75400 957 aaKnown RBP6.28□□□□□ -1.4
SAMSN1-203ENST00000400566 BMP15O95972 392 aa6.28□□□□□ -1.4
SAMSN1-203ENST00000400566 FOSP01100 380 aaPredicted RBP6.28□□□□□ -1.4
SAMSN1-203ENST00000400566 IRX3P78415 501 aaPredicted RBP6.28□□□□□ -1.4
SAMSN1-203ENST00000400566 SF3A1Q15459 793 aaKnown RBP6.28□□□□□ -1.4
SAMSN1-203ENST00000400566 AMHR2Q16671 573 aa6.28□□□□□ -1.4
SAMSN1-203ENST00000400566 LAPTM4BQ86VI4 370 aa6.28□□□□□ -1.4
SAMSN1-203ENST00000400566 CPXCR1Q8N123 301 aa6.28□□□□□ -1.4
SAMSN1-203ENST00000400566 KCNG4Q8TDN1 519 aa6.28□□□□□ -1.4
SAMSN1-203ENST00000400566 CLEC4DQ8WXI8 215 aa6.28□□□□□ -1.4
SAMSN1-203ENST00000400566 TEX13BQ9BXU2 312 aa6.28□□□□□ -1.4
SAMSN1-203ENST00000400566 MAF1Q9H063 256 aa6.28□□□□□ -1.4
SAMSN1-203ENST00000400566 ASCC2Q9H1I8 757 aaPredicted RBP6.28□□□□□ -1.4
SAMSN1-203ENST00000400566 RAVER2Q9HCJ3 691 aaKnown RBP6.28□□□□□ -1.4
SAMSN1-203ENST00000400566 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.28□□□□□ -1.4
SAMSN1-203ENST00000400566 MAP3K20Q9NYL2 800 aaKnown RBP6.28□□□□□ -1.4
SAMSN1-203ENST00000400566 BIN2Q9UBW5 565 aaPredicted RBP6.28□□□□□ -1.4
SAMSN1-203ENST00000400566 CLIC4Q9Y696 253 aa6.28□□□□□ -1.4
SAMSN1-203ENST00000400566 TLL2Q9Y6L7 1015 aa6.28□□□□□ -1.4
SAMSN1-203ENST00000400566 CCL15-CCL14A0A0B4J2E2 113 aa6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 GCOM1H8Y6P7 765 aaPredicted RBP6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 SPTLC2O15270 562 aa6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 PPP6R2O75170 966 aa6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 POLR2MP0CAP2 368 aa6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 TAL1P17542 331 aaPredicted RBP6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 HSD17B4P51659 736 aa6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 UBE2HP62256 183 aa6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 HERVK_113P62684 666 aa6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 CEBPZQ03701 1054 aaKnown RBP6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 FSTL1Q12841 308 aa6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 ORC2Q13416 577 aaPredicted RBP6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 TMEM132BQ14DG7 1078 aa6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 CCL15Q16663 113 aa6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 UBE2SQ16763 222 aa6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 INF2Q27J81 1249 aa6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 TKFCQ3LXA3 575 aa6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 TTC38Q5R3I4 469 aa6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 JAKMIP3Q5VZ66 844 aa6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 RGMBQ6NW40 437 aa6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 USP17L6PQ6QN14 398 aa6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 ANKRD23Q86SG2 305 aa6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 NEK8Q86SG6 692 aa6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 MCF2L2Q86YR7 1114 aa6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 RASAL3Q86YV0 1011 aa6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 JMYQ8N9B5 988 aa6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 TBCKQ8TEA7 893 aa6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 CRYGNQ8WXF5 182 aa6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 BRI3BPQ8WY22 251 aa6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 HHIPL1Q96JK4 782 aa6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 P2RX7Q99572 595 aaKnown RBP6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 TMEM260Q9NX78 707 aa6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 CEP131Q9UPN4 1083 aa6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 CTDP1Q9Y5B0 961 aaPredicted RBP6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 PCDHB6Q9Y5E3 794 aa6.27□□□□□ -1.41
SAMSN1-203ENST00000400566 TMEM88BA6NKF7 163 aa6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 BTBD19C9JJ37 291 aa6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 NFIBO00712 420 aa6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 WNT7AO00755 349 aa6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 ALAS1P13196 640 aa6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 STAT3P40763 770 aa6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 ZNF157P51786 506 aaPredicted RBP6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 ATP2C1P98194 919 aaPredicted RBP6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 STK38Q15208 465 aa6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 SKOR2Q2VWA4 1001 aaPredicted RBP6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 SNRNP48Q6IEG0 339 aaKnown RBP6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 ZNF784Q8NCA9 323 aaPredicted RBP6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 GTF3C2Q8WUA4 911 aaPredicted RBP6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 PGBD1Q96JS3 809 aa6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 ZFRQ96KR1 1074 aaKnown RBP6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 TRERF1Q96PN7 1200 aa6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 REPIN1Q9BWE0 567 aaKnown RBP6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 ANO3Q9BYT9 981 aa6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 TMEM134Q9H6X4 195 aa6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 RNF146Q9NTX7 359 aa6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 RIPK3Q9Y572 518 aa6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 LCTP09848 1927 aa6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 A0A1W2PQ27 194 aa6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 A0A1W2PQ64 194 aa6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 A0A1W2PQD8 194 aa6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 MANSC4A6NHS7 340 aaPredicted RBP6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 SPDYE3A6NKU9 549 aa6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 PDHXO00330 501 aa6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 LAD1O00515 517 aa6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 EDIL3O43854 480 aa6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 GADD45BO75293 160 aaPredicted RBP6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 MBD3O95983 291 aa6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 CFBP00751 764 aa6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 SLC10A3P09131 477 aa6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 GCFC2P16383 781 aaKnown RBP6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 ATP2B1P20020 1258 aa6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 YY1P25490 414 aa6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 DNAJB2P25686 324 aa6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 HOXA13P31271 388 aaPredicted RBP6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 SREBF1P36956 1147 aa6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 ME1P48163 572 aa6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 USP11P51784 963 aa6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 KLHL40Q2TBA0 621 aa6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 MUM1L1Q5H9M0 696 aa6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 AXDND1Q5T1B0 1012 aaPredicted RBP6.26□□□□□ -1.41
SAMSN1-203ENST00000400566 ARL6IP4Q66PJ3 421 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms